Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.346 Acer truncatum HOM05D018348 ORTHO05D019393 3.5e-91 338.2 161 100.0
Atru.chr2.2227 Acer truncatum HOM05D000001 ORTHO05D000501 5.5e-28 128.3 157 43.3
Ciclev10027322m.g Citrus clementina HOM05D000001 ORTHO05D011474 3.8e-13 79.0 140 32.9
Atru.chr2.208 Acer truncatum HOM05D000001 ORTHO05D000501 1.0e-10 70.9 116 36.2
Peaxi162Scf00457g00003 Petunia axillaris HOM05D018348 ORTHO05D019393 1.0e-10 70.9 148 32.4
Phvul.010G110200 Phaseolus vulgaris HOM05D000001 ORTHO05D000501 1.4e-10 70.5 129 34.1
Thecc.01G205800 Theobroma cacao HOM05D000001 ORTHO05D000501 1.8e-10 70.1 121 34.7
Duzib138G0079 Durio zibethinus HOM05D000001 ORTHO05D000501 3.0e-10 69.3 121 33.9
VMungo0331G1324 Vigna mungo HOM05D000001 ORTHO05D000501 3.0e-10 69.3 134 33.6
Actinidia23809 Actinidia chinensis HOM05D000001 ORTHO05D000501 3.9e-10 68.9 120 35.0
Ciclev10003503m.g Citrus clementina HOM05D000001 ORTHO05D000501 8.8e-10 67.8 129 30.2
Glyma.07G059300 Glycine max HOM05D000001 ORTHO05D000501 2.6e-09 66.2 119 31.1
Aqoxy3G04090 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 3.3e-09 65.9 114 32.5
Aa31LG7G8300 Aethionema arabicum HOM05D000777 ORTHO05D000595 4.4e-09 65.5 135 29.6
HPP92_011249 Vanilla planifolia HOM05D000001 ORTHO05D000501 4.4e-09 65.5 123 32.5
HPP92_003442 Vanilla planifolia HOM05D000001 ORTHO05D000501 5.7e-09 65.1 120 34.2
Dinv07638 Davidia involucrata HOM05D000001 ORTHO05D000501 9.7e-09 64.3 120 33.3
Eucgr.H00686 Eucalyptus grandis HOM05D000001 ORTHO05D000501 9.7e-09 64.3 128 30.5
CsaV3_7G027100 Cucumis sativus L. HOM05D003048 ORTHO05D003418 1.3e-08 63.9 142 29.6
Glyma.16G028200 Glycine max HOM05D000001 ORTHO05D000501 2.2e-08 63.2 116 31.9
Medtr8g028080 Medicago truncatula HOM05D000001 ORTHO05D000501 2.2e-08 63.2 120 33.3
Solyc06g082890.4 Solanum lycopersicum HOM05D000001 ORTHO05D000501 2.2e-08 63.2 127 33.1
CSS0003932 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 6.3e-08 61.6 140 29.3
Cfa006668 Carpinus fangiana HOM05D000001 ORTHO05D000501 6.3e-08 61.6 127 28.3
CiPaw.07G025200 Carya illinoinensis HOM05D000001 ORTHO05D000501 6.3e-08 61.6 150 29.3
arahy.Tifrunner.gnm1.ann1.E6ZCRX Arachis hypogaea HOM05D000001 ORTHO05D000501 8.2e-08 61.2 153 24.2
Nn1g09526 Nelumbo nucifera HOM05D000001 ORTHO05D000501 8.2e-08 61.2 116 31.9
Thecc.10G164800 Theobroma cacao HOM05D000001 ORTHO05D000501 8.2e-08 61.2 140 34.3
arahy.Tifrunner.gnm1.ann1.VQ1W7S Arachis hypogaea HOM05D000001 ORTHO05D000501 1.1e-07 60.8 153 24.2
Sopen06g034250 Solanum pennellii HOM05D000001 ORTHO05D000501 1.4e-07 60.5 135 31.1
Rhsim01G0145400 Rhododendron simsii HOM05D000001 ORTHO05D000501 1.8e-07 60.1 135 31.1
QL02p082346 Quercus lobata HOM05D000001 ORTHO05D000501 4.1e-07 58.9 133 30.8
Ciclev10003955m.g Citrus clementina HOM05D000001 ORTHO05D000501 5.3e-07 58.5 144 27.8
Mapoly0043s0116 Marchantia polymorpha HOM05D000001 ORTHO05D000501 7.0e-07 58.2 143 25.2
arahy.Tifrunner.gnm1.ann1.4JGH0F Arachis hypogaea HOM05D000001 ORTHO05D000501 2.6e-06 56.2 123 28.5
arahy.Tifrunner.gnm1.ann1.7W4W3Z Arachis hypogaea HOM05D000001 ORTHO05D000501 3.5e-06 55.8 119 28.6
AUR62005800 Chenopodium quinoa HOM05D000001 ORTHO05D000501 3.5e-06 55.8 142 30.3
Gohir.A06G174400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 7.7e-06 54.7 116 31.9


User provided reference genes

Program Settings