Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 2.9e-57 225.3 144 100.0
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.4e-43 179.9 137 87.6
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 1.9e-43 179.5 137 86.1
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.2e-42 176.8 137 85.4
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 2.1e-42 176.0 137 85.4
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 6.6e-41 171.0 144 78.5
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 1.5e-40 169.9 140 71.4
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 3.3e-40 168.7 137 81.8
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 3.3e-40 168.7 142 68.3
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 4.4e-37 158.3 143 76.9
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 5.8e-37 157.9 143 76.9
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.3e-36 156.8 148 75.0
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 2.9e-36 155.6 128 79.7
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 4.9e-36 154.8 140 76.4
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 7.1e-35 151.0 148 73.0
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 2.1e-34 149.4 127 78.7
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 3.5e-34 148.7 141 71.6
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 3.5e-34 148.7 86 77.9
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 4.6e-34 148.3 127 79.5
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 4.6e-34 148.3 135 76.3
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 4.6e-34 148.3 119 87.4
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 6.0e-34 147.9 135 71.1
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 6.0e-34 147.9 139 72.7
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 6.0e-34 147.9 140 58.6
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 1.0e-33 147.1 140 72.9
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.3e-33 146.0 131 68.7
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 3.0e-33 145.6 142 69.0
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 6.6e-33 144.4 134 73.9
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 8.6e-33 144.1 142 69.0
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 1.9e-32 142.9 142 47.9
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 1.9e-32 142.9 138 70.3
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 1.9e-32 142.9 132 72.0
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.5e-32 142.5 133 72.2
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.5e-32 142.5 133 72.2
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.5e-32 142.5 133 72.2
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 3.3e-32 142.1 141 71.6
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 4.3e-32 141.7 139 74.1
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.3e-32 141.7 140 70.0
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 1.2e-31 140.2 131 71.0
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 1.6e-31 139.8 141 69.5
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 2.8e-31 139.0 121 81.0
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 2.8e-31 139.0 137 69.3
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 2.8e-31 139.0 137 70.1
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 3.6e-31 138.7 140 68.6
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 4.7e-31 138.3 127 75.6
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 6.2e-31 137.9 142 66.9
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 6.2e-31 137.9 128 75.0
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 1.1e-30 137.1 131 69.5
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 1.4e-30 136.7 128 78.1
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 1.8e-30 136.3 140 67.9
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 2.4e-30 136.0 131 71.8
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 2.4e-30 136.0 140 67.9
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 3.1e-30 135.6 135 68.9
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 4.0e-30 135.2 140 66.4
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 4.0e-30 135.2 142 68.3
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 4.0e-30 135.2 139 69.1
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 5.2e-30 134.8 137 67.9
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 5.2e-30 134.8 138 58.0
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 6.8e-30 134.4 140 67.9
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.5e-29 133.3 138 65.2
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 2.0e-29 132.9 137 64.2
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 2.6e-29 132.5 131 69.5
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 3.4e-29 132.1 129 73.6
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 3.4e-29 132.1 139 68.3
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 4.4e-29 131.7 139 67.6
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 5.8e-29 131.3 79 72.2
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 7.6e-29 131.0 137 62.8
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 7.6e-29 131.0 136 67.6
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 7.6e-29 131.0 90 65.6
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 1.3e-28 130.2 131 66.4
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 1.7e-28 129.8 130 63.8
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 2.2e-28 129.4 136 68.4
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 2.2e-28 129.4 136 68.4
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 2.2e-28 129.4 139 66.2
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 2.2e-28 129.4 118 76.3
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 3.8e-28 128.6 133 69.9
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 6.4e-28 127.9 136 67.6
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 8.4e-28 127.5 127 70.9
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 1.9e-27 126.3 136 66.9
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 4.1e-27 125.2 131 67.9
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 5.4e-27 124.8 130 68.5
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 5.4e-27 124.8 130 64.6
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 5.4e-27 124.8 136 64.0
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 1.2e-26 123.6 113 77.9
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 3.5e-26 122.1 140 62.1
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 3.5e-26 122.1 140 45.0
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 1.7e-25 119.8 140 63.6
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 3.0e-25 119.0 130 59.2
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 3.9e-25 118.6 83 61.4
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 3.9e-25 118.6 116 53.4
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 3.9e-25 118.6 142 53.5
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 3.3e-24 115.5 149 40.9
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 5.6e-24 114.8 133 61.7
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 9.6e-24 114.0 131 62.6
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 9.6e-24 114.0 126 63.5
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.6e-23 113.2 147 40.8
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 1.6e-23 113.2 126 62.7
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 2.1e-23 112.8 126 62.7
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 1.1e-22 110.5 83 57.8
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 1.4e-22 110.2 132 58.3
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 4.0e-22 108.6 126 61.1
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 5.2e-22 108.2 133 57.9
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 2.0e-21 106.3 119 60.5
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 3.4e-21 105.5 96 71.9
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 5.8e-21 104.8 121 59.5
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 2.9e-20 102.4 101 77.2
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 2.9e-20 102.4 131 58.8
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 2.9e-20 102.4 131 58.8
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 6.4e-20 101.3 133 55.6
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.4e-19 100.1 126 64.3
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 5.4e-19 98.2 131 44.3
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 4.6e-18 95.1 108 71.3
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 6.0e-18 94.7 147 52.4
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 7.8e-18 94.4 111 59.5
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 6.6e-17 91.3 125 55.2
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 3.1e-14 82.4 120 36.7
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 3.1e-14 82.4 120 36.7
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 5.3e-14 81.6 118 36.4
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 5.3e-14 81.6 118 36.4
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 5.3e-14 81.6 118 36.4
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 1.5e-13 80.1 121 34.7
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 4.5e-13 78.6 59 61.0
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 9.9e-13 77.4 125 50.4
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 1.3e-12 77.0 60 55.0
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 3.8e-12 75.5 119 33.6
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 8.4e-12 74.3 122 41.0
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 2.4e-11 72.8 104 36.5
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 5.1e-09 65.1 73 45.2
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.9e-08 63.2 94 47.9
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 2.5e-08 62.8 141 41.8
Hma1.2p1_1820F.1_g304180 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 8.1e-07 57.8 65 87.7


User provided reference genes

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