Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1826 Acer truncatum HOM05D004514 ORTHO05D005147 1.2e-29 132.5 66 100.0
Haze_07164 Corylus avellana HOM05D004514 ORTHO05D005147 1.8e-09 65.5 69 55.1
Atru.chr5.373 Acer truncatum HOM05D004514 ORTHO05D005147 6.8e-09 63.5 51 64.7
GSVIVG01008554001 Vitis vinifera HOM05D004514 ORTHO05D005147 3.4e-08 61.2 69 53.6
Ciclev10032114m.g Citrus clementina HOM05D004514 ORTHO05D005147 5.8e-08 60.5 69 50.7
Manes.14G049500 Manihot esculenta HOM05D004514 ORTHO05D005147 7.5e-08 60.1 69 50.7
Potri.012G100800 Populus trichocarpa HOM05D004514 ORTHO05D005147 7.5e-08 60.1 68 54.4
Sabra15G0119900 Salix brachista HOM05D004514 ORTHO05D005147 7.5e-08 60.1 69 52.2
arahy.Tifrunner.gnm1.ann1.PL1S0I Arachis hypogaea HOM05D004514 ORTHO05D005147 1.3e-07 59.3 69 52.2
arahy.Tifrunner.gnm1.ann1.V9PUN9 Arachis hypogaea HOM05D004514 ORTHO05D005147 1.3e-07 59.3 69 52.2
AUR62038747 Chenopodium quinoa HOM05D004514 ORTHO05D005147 1.3e-07 59.3 69 50.7
CsaV3_1G009770 Cucumis sativus L. HOM05D004514 ORTHO05D005147 1.3e-07 59.3 69 49.3
Carub.0008s1067 Capsella rubella HOM05D004514 ORTHO05D005147 1.7e-07 58.9 69 52.2
Gohir.A12G190300 Gossypium hirsutum HOM05D004514 ORTHO05D005147 2.2e-07 58.5 69 50.7
AUR62020635 Chenopodium quinoa HOM05D004514 ORTHO05D005147 2.9e-07 58.2 69 49.3
Potri.015G099000 Populus trichocarpa HOM05D004514 ORTHO05D005147 3.7e-07 57.8 69 52.2
EL10Ac2g03710 Beta vulgaris HOM05D004514 ORTHO05D005147 4.9e-07 57.4 69 49.3
Lj4g0022972 Lotus japonicus HOM05D004514 ORTHO05D005147 4.9e-07 57.4 69 50.7
Actinidia25561 Actinidia chinensis HOM05D004514 ORTHO05D005147 6.4e-07 57.0 69 47.8
Dinv23167 Davidia involucrata HOM05D004514 ORTHO05D005147 6.4e-07 57.0 69 49.3
Manes.06G121000 Manihot esculenta HOM05D004514 ORTHO05D005147 6.4e-07 57.0 69 47.8
Hund02453 Selenicereus undatus HOM05D004514 ORTHO05D005147 6.4e-07 57.0 75 46.7
QL10p002475 Quercus lobata HOM05D004514 ORTHO05D005147 8.3e-07 56.6 69 50.7
Glyma.08G011400 Glycine max HOM05D004514 ORTHO05D005147 1.1e-06 56.2 69 49.3
Gohir.D12G192600 Gossypium hirsutum HOM05D004514 ORTHO05D005147 1.1e-06 56.2 69 49.3
Gorai.008G207100 Gossypium raimondii HOM05D004514 ORTHO05D005147 1.1e-06 56.2 69 49.3
ClCG03G003890 Citrullus lanatus HOM05D004514 ORTHO05D005147 1.4e-06 55.8 68 48.5
MELO3C002371.2 Cucumis melo HOM05D004514 ORTHO05D005147 1.4e-06 55.8 68 48.5
Gohir.A03G054600 Gossypium hirsutum HOM05D004514 ORTHO05D005147 1.4e-06 55.8 69 47.8
Lalb_Chr12g0202281 Lupinus albus HOM05D004514 ORTHO05D005147 1.4e-06 55.8 69 47.8
Ah.11g044000 Amaranthus hybridus HOM05D004514 ORTHO05D005147 1.9e-06 55.5 69 49.3
Aqoxy5G03306 Aquilegia oxysepala HOM05D004514 ORTHO05D005147 1.9e-06 55.5 69 50.7
CARHR257690 Cardamine hirsuta HOM05D004514 ORTHO05D005147 2.4e-06 55.1 69 49.3
Cc01_g02400 Coffea canephora HOM05D004514 ORTHO05D005147 2.4e-06 55.1 69 46.4
Lj4g0011293 Lotus japonicus HOM05D004514 ORTHO05D005147 2.4e-06 55.1 69 49.3
TAR371G0381 Trochodendron aralioides HOM05D004514 ORTHO05D005147 2.4e-06 55.1 69 47.8
AL8G24840 Arabidopsis lyrata HOM05D004514 ORTHO05D005147 3.2e-06 54.7 69 49.3
Sed0016514 Sechium edule HOM05D004514 ORTHO05D005147 3.2e-06 54.7 69 46.4
Thecc.03G131800 Theobroma cacao HOM05D004514 ORTHO05D005147 3.2e-06 54.7 69 49.3
Lalb_Chr07g0183531 Lupinus albus HOM05D004514 ORTHO05D005147 4.1e-06 54.3 69 46.4
Glyma.05G204000 Glycine max HOM05D004514 ORTHO05D005147 5.4e-06 53.9 69 46.4
Sp6g12760 Schrenkiella parvula HOM05D004514 ORTHO05D005147 9.2e-06 53.1 69 47.8
Solyc03g019730.4 Solanum lycopersicum HOM05D004514 ORTHO05D005147 9.2e-06 53.1 69 43.5
Sopen03g029890 Solanum pennellii HOM05D004514 ORTHO05D005147 9.2e-06 53.1 69 43.5
TAR629G1553 Trochodendron aralioides HOM05D004514 ORTHO05D005147 9.2e-06 53.1 69 47.8


User provided reference genes

Program Settings