Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 1.3e-160 569.7 287 100.0
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 5.2e-130 468.0 252 92.1
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 3.7e-120 435.3 254 85.8
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 3.7e-120 435.3 254 85.8
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.9e-119 433.0 251 86.9
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.9e-119 433.0 251 86.9
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.9e-119 433.0 251 86.9
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.9e-119 433.0 252 85.3
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 4.1e-119 431.8 251 85.3
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.1e-119 431.8 252 84.9
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 4.1e-119 431.8 246 86.6
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 5.4e-119 431.4 252 84.5
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 5.4e-119 431.4 251 86.1
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 7.0e-119 431.0 249 86.3
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 1.2e-118 430.3 251 85.7
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.2e-118 430.3 251 86.5
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.2e-118 430.3 249 85.1
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 1.6e-118 429.9 254 84.3
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.6e-118 429.9 248 85.5
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.1e-118 429.5 245 86.9
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 2.1e-118 429.5 253 84.2
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 2.7e-118 429.1 251 85.7
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 4.6e-118 428.3 245 86.5
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 7.8e-118 427.6 251 85.7
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 7.8e-118 427.6 251 84.9
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 7.8e-118 427.6 249 85.1
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.0e-117 427.2 249 84.3
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.0e-117 427.2 249 84.3
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 1.3e-117 426.8 251 84.9
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 1.3e-117 426.8 251 85.3
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 1.3e-117 426.8 252 84.5
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 1.7e-117 426.4 249 85.1
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 3.9e-117 425.2 249 84.7
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 6.6e-117 424.5 251 84.1
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 8.6e-117 424.1 251 84.9
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.6e-117 424.1 248 83.9
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 1.1e-116 423.7 251 84.1
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.1e-116 423.7 249 83.9
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 1.5e-116 423.3 251 84.9
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.9e-116 422.9 245 84.5
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.9e-116 422.9 245 84.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.5e-116 422.5 249 84.3
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 2.5e-116 422.5 245 85.3
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 3.3e-116 422.2 251 85.3
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 3.3e-116 422.2 249 85.1
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 4.3e-116 421.8 249 84.7
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.2e-115 420.2 249 83.5
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.2e-115 420.2 251 84.1
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 1.6e-115 419.9 249 84.3
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.8e-115 419.1 255 82.7
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 2.8e-115 419.1 245 83.7
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 3.6e-115 418.7 274 78.8
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 4.7e-115 418.3 252 83.3
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 4.7e-115 418.3 252 83.3
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 4.7e-115 418.3 249 81.5
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 6.2e-115 417.9 253 83.0
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 6.2e-115 417.9 250 83.2
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 8.1e-115 417.5 246 84.1
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 8.1e-115 417.5 245 83.7
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 8.1e-115 417.5 245 83.7
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.1e-114 417.2 255 82.4
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 1.1e-114 417.2 254 83.5
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 1.1e-114 417.2 245 83.7
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 1.1e-114 417.2 245 83.3
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 1.8e-114 416.4 249 84.3
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 1.8e-114 416.4 255 82.4
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 1.8e-114 416.4 249 83.9
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 2.3e-114 416.0 251 80.9
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 2.3e-114 416.0 245 83.3
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 3.1e-114 415.6 251 81.7
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 3.1e-114 415.6 251 83.3
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 4.0e-114 415.2 252 82.5
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 4.0e-114 415.2 251 80.9
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 4.0e-114 415.2 247 81.8
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 5.2e-114 414.8 249 81.1
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 5.2e-114 414.8 251 83.3
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 5.2e-114 414.8 251 81.3
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 8.9e-114 414.1 252 82.5
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 8.9e-114 414.1 252 82.1
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 8.9e-114 414.1 246 83.3
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 8.9e-114 414.1 251 81.7
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 1.2e-113 413.7 249 82.3
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 1.5e-113 413.3 249 82.3
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 2.0e-113 412.9 249 81.5
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 5.8e-113 411.4 254 81.9
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 9.9e-113 410.6 255 82.0
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 1.7e-112 409.8 251 82.5
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 1.7e-112 409.8 245 82.9
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 2.9e-112 409.1 246 82.9
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 3.7e-112 408.7 241 82.6
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 4.9e-112 408.3 249 79.9
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 4.9e-112 408.3 251 80.5
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 6.4e-112 407.9 251 83.3
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.1e-111 407.1 255 81.2
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 1.4e-111 406.8 251 80.5
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 5.4e-111 404.8 251 79.3
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 9.2e-111 404.1 251 79.7
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.1e-110 402.9 228 86.8
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 2.1e-110 402.9 255 78.8
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 2.7e-110 402.5 249 77.9
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 4.6e-110 401.7 254 79.1
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 6.0e-110 401.4 251 77.7
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 1.3e-109 400.2 251 78.1
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 3.9e-109 398.7 242 80.6
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 3.6e-107 392.1 264 76.9
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 3.1e-106 389.0 251 74.9
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 4.0e-106 388.7 281 72.6
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 4.4e-105 385.2 251 75.7
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 6.4e-104 381.3 228 81.1
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 6.4e-104 381.3 245 75.9
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 3.2e-103 379.0 230 80.9
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 4.6e-102 375.2 251 74.5
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.0e-101 374.0 307 66.4
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 1.7e-101 373.2 251 74.1
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 6.6e-101 371.3 218 85.3
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 6.2e-99 364.8 212 84.4
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 4.0e-98 362.1 217 81.6
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 2.0e-97 359.8 255 72.2
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.3e-96 357.1 241 72.6
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.3e-93 347.1 254 67.7
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 8.1e-91 337.8 227 72.2
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 2.4e-90 336.3 236 70.8
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 7.6e-89 331.3 195 84.6
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 2.9e-88 329.3 200 79.5
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 4.6e-86 322.0 252 63.5
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 5.8e-81 305.1 261 64.0
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.1e-76 290.8 247 62.3
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 3.1e-74 282.7 171 81.3
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 5.7e-68 261.9 152 84.9
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 3.7e-67 259.2 249 59.0
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 2.2e-64 250.0 142 85.9
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 3.8e-64 249.2 163 76.1
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 1.6e-62 243.8 214 57.0
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.8e-58 230.3 144 79.9
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 2.5e-55 219.9 242 49.2
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 4.2e-55 219.2 151 67.5
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 2.3e-53 213.4 121 86.8
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.6e-52 209.9 148 73.0
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.9e-48 196.4 106 89.6
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 8.0e-38 161.8 106 67.0
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 7.0e-34 148.7 96 78.1
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 9.1e-34 148.3 95 77.9
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 8.8e-29 131.7 97 66.0
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.5e-28 131.0 74 83.8
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 1.9e-23 114.0 93 64.5
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.7e-19 99.8 101 56.4
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.4e-18 97.1 70 71.4
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 8.6e-16 88.6 74 60.8
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.6e-15 85.9 48 85.4
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 2.8e-14 83.6 66 57.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 1.9e-10 70.9 53 69.8
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 7.0e-10 68.9 103 43.7
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.6e-09 67.8 41 78.0
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 2.7e-09 67.0 173 29.5
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 4.6e-09 66.2 45 68.9
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.6e-06 57.8 50 60.0


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