Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 3.6e-48 194.5 93 100.0
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 2.3e-18 95.5 57 78.9
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 8.6e-18 93.6 56 80.4
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 1.5e-17 92.8 56 78.6
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 1.9e-17 92.4 55 80.0
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.9e-17 92.4 79 62.0
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.5e-17 92.0 79 62.0
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 2.5e-17 92.0 79 60.8
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 3.3e-17 91.7 79 60.8
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 3.3e-17 91.7 79 60.8
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 4.3e-17 91.3 56 80.4
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 5.6e-17 90.9 56 76.8
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 5.6e-17 90.9 57 75.4
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 5.6e-17 90.9 88 54.5
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 9.6e-17 90.1 56 78.6
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 9.6e-17 90.1 79 59.5
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 1.2e-16 89.7 56 76.8
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 1.2e-16 89.7 56 78.6
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.2e-16 89.7 56 78.6
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.2e-16 89.7 56 78.6
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 1.2e-16 89.7 56 78.6
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.2e-16 89.7 55 78.2
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 1.2e-16 89.7 55 76.4
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 1.2e-16 89.7 71 63.4
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 1.2e-16 89.7 79 59.5
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.6e-16 89.4 79 59.5
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.6e-16 89.4 79 59.5
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.6e-16 89.4 79 60.8
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 2.1e-16 89.0 56 78.6
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 2.1e-16 89.0 56 75.0
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 2.1e-16 89.0 79 60.8
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 2.1e-16 89.0 56 75.0
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 2.1e-16 89.0 79 60.8
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 2.1e-16 89.0 57 73.7
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.8e-16 88.6 56 76.8
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 2.8e-16 88.6 79 59.5
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 2.8e-16 88.6 57 73.7
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.8e-16 88.6 79 60.8
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 2.8e-16 88.6 57 73.7
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 3.6e-16 88.2 56 75.0
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.6e-16 88.2 79 59.5
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 3.6e-16 88.2 61 68.9
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 4.7e-16 87.8 56 73.2
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 6.2e-16 87.4 79 55.7
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 6.2e-16 87.4 57 73.7
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 6.2e-16 87.4 57 73.7
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 6.2e-16 87.4 55 76.4
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 6.2e-16 87.4 80 56.2
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 8.1e-16 87.0 56 71.4
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 8.1e-16 87.0 79 59.5
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 8.1e-16 87.0 80 57.5
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 1.1e-15 86.7 56 76.8
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.1e-15 86.7 57 71.9
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.1e-15 86.7 57 73.7
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.1e-15 86.7 79 59.5
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.1e-15 86.7 56 75.0
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 1.4e-15 86.3 79 57.0
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 1.4e-15 86.3 56 75.0
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 1.8e-15 85.9 79 57.0
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 1.8e-15 85.9 80 56.2
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.8e-15 85.9 56 73.2
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 1.8e-15 85.9 55 74.5
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 2.4e-15 85.5 56 69.6
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 2.4e-15 85.5 56 73.2
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 2.4e-15 85.5 56 73.2
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 2.4e-15 85.5 79 58.2
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 4.0e-15 84.7 79 58.2
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 4.0e-15 84.7 54 74.1
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 4.0e-15 84.7 56 75.0
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 6.8e-15 84.0 57 70.2
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 6.8e-15 84.0 57 70.2
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 6.8e-15 84.0 55 72.7
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 6.8e-15 84.0 80 57.5
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 8.9e-15 83.6 64 68.8
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 8.9e-15 83.6 56 73.2
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 1.2e-14 83.2 56 73.2
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.2e-14 83.2 56 71.4
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.2e-14 83.2 58 70.7
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.5e-14 82.8 56 67.9
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 1.5e-14 82.8 56 73.2
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 1.5e-14 82.8 56 69.6
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 2.0e-14 82.4 57 68.4
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 2.0e-14 82.4 56 71.4
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 2.0e-14 82.4 56 71.4
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 3.4e-14 81.6 56 71.4
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 3.4e-14 81.6 56 69.6
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 4.4e-14 81.3 57 66.7
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 4.4e-14 81.3 55 72.7
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 4.4e-14 81.3 56 69.6
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 5.8e-14 80.9 56 69.6
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 5.8e-14 80.9 56 69.6
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 5.8e-14 80.9 56 69.6
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 1.7e-13 79.3 56 67.9
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 2.9e-13 78.6 56 66.1
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 3.8e-13 78.2 54 72.2
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 3.8e-13 78.2 56 71.4
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 6.4e-13 77.4 56 71.4
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 8.4e-13 77.0 58 67.2
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 8.4e-13 77.0 58 67.2
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 8.4e-13 77.0 58 67.2
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 8.4e-13 77.0 58 67.2
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.4e-12 76.3 54 72.2
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.4e-12 76.3 54 72.2
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.4e-12 76.3 54 72.2
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 1.4e-12 76.3 54 72.2
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.4e-12 76.3 54 72.2
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 1.4e-12 76.3 56 66.1
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.4e-12 76.3 56 66.1
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.9e-12 75.9 56 66.1
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.9e-12 75.9 56 66.1
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 2.4e-12 75.5 56 69.6
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 3.2e-12 75.1 56 67.9
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 4.2e-12 74.7 54 70.4
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 4.2e-12 74.7 54 70.4
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 5.4e-12 74.3 56 67.9
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 7.1e-12 73.9 52 71.2
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 9.3e-12 73.6 59 62.7
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 9.3e-12 73.6 56 62.5
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 9.3e-12 73.6 56 62.5
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.2e-11 73.2 56 64.3
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.2e-11 73.2 56 62.5
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 2.7e-11 72.0 54 66.7
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 7.8e-11 70.5 48 72.9
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.3e-10 68.9 54 63.0
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 2.3e-10 68.9 54 63.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.3e-08 63.2 38 76.3
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 8.1e-08 60.5 43 62.8
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 1.1e-07 60.1 54 55.6


User provided reference genes

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