Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 3.2e-133 478.4 241 100.0
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 8.3e-121 437.2 241 90.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.2e-108 396.7 238 82.4
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 4.7e-108 394.8 241 81.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.8e-107 392.9 240 80.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.0e-107 392.1 236 80.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 3.0e-107 392.1 239 82.0
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 79.3
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 78.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 79.3
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.6e-106 389.0 236 80.1
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.6e-106 389.0 241 78.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 3.4e-106 388.7 241 77.2
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 5.7e-106 387.9 241 77.6
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 5.7e-106 387.9 241 77.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.7e-105 386.3 229 81.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.7e-105 386.3 241 80.1
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 2.9e-105 385.6 241 77.6
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 3.7e-105 385.2 241 77.6
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 4.9e-105 384.8 241 76.8
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 6.4e-105 384.4 241 77.2
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 8.3e-105 384.0 241 76.8
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 8.3e-105 384.0 241 77.2
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 77.6
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.4e-104 383.3 241 77.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.4e-104 383.3 241 77.6
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 3.2e-104 382.1 241 77.6
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.2e-104 382.1 241 76.8
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 3.2e-104 382.1 239 79.1
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.0e-104 380.9 241 77.2
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.2e-104 380.6 232 78.0
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.6e-103 379.8 241 75.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.7e-103 379.0 241 76.8
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 2.7e-103 379.0 241 76.3
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.6e-103 378.3 235 78.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 7.8e-103 377.5 235 77.0
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 7.8e-103 377.5 239 76.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 7.8e-103 377.5 232 78.0
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 7.8e-103 377.5 235 77.4
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 7.8e-103 377.5 241 76.3
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.0e-102 377.1 241 74.7
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.3e-102 376.7 241 74.3
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.7e-102 376.3 241 76.3
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.3e-102 375.9 235 76.6
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.9e-102 375.2 234 76.9
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 3.9e-102 375.2 253 73.5
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 73.9
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 73.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.1e-101 373.6 221 82.8
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 3.3e-101 372.1 241 75.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 4.3e-101 371.7 234 76.1
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 5.6e-101 371.3 247 74.1
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 7.3e-101 370.9 232 76.7
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 9.5e-101 370.5 236 75.8
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 9.5e-101 370.5 241 75.5
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.1e-100 369.4 241 75.1
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.6e-100 368.6 241 73.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 3.6e-100 368.6 232 76.3
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.4e-99 366.7 237 76.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.8e-99 366.3 241 73.4
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.8e-99 366.3 238 73.9
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.3e-99 365.9 236 75.8
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.0e-99 365.2 264 70.5
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.2e-99 364.8 236 75.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.6e-98 362.5 257 71.6
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 3.4e-98 362.1 223 78.0
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.3e-97 360.1 229 74.2
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 4.9e-97 358.2 224 77.2
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.4e-97 357.8 261 68.6
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.4e-96 356.7 241 71.4
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 2.4e-96 355.9 262 68.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 7.0e-96 354.4 242 72.7
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.2e-95 353.6 233 72.5
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.0e-95 352.8 230 75.2
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.7e-94 349.7 229 74.2
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 5.0e-94 348.2 282 65.6
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 6.6e-94 347.8 229 73.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 8.6e-94 347.4 228 72.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.5e-93 346.7 241 72.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 9.5e-93 344.0 209 80.4
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.6e-92 343.2 233 73.8
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 3.6e-92 342.0 210 80.0
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 4.0e-91 338.6 228 71.1
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.5e-90 336.7 241 70.1
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.4e-90 335.5 228 70.6
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 5.8e-90 334.7 228 70.2
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 2.2e-89 332.8 242 69.8
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.9e-86 322.0 250 64.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.5e-85 319.3 259 62.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.7e-84 315.1 238 66.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 2.9e-81 305.8 226 65.9
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.9e-80 303.1 232 64.2
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 7.8e-79 297.7 196 74.0
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.0e-78 297.4 237 66.2
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 8.6e-78 294.3 196 74.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.6e-77 291.6 191 75.9
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 9.6e-77 290.8 211 68.7
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.7e-76 288.5 271 59.0
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 4.2e-72 275.4 306 51.0
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.9e-70 268.9 239 55.6
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.5e-69 266.9 194 70.6
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 3.3e-69 265.8 177 73.4
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.4e-64 250.4 220 54.5
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 4.6e-63 245.4 231 56.3
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 3.0e-62 242.7 160 71.2
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 7.4e-61 238.0 225 52.0
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 2.0e-58 229.9 184 62.0
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 2.0e-58 229.9 184 62.0
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 9.9e-58 227.6 194 62.9
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.7e-57 226.9 156 69.9
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 4.3e-53 212.2 220 48.6
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 7.9e-47 191.4 123 77.2
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.4e-40 170.6 128 66.4
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 1.5e-37 160.6 164 53.0
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.1e-35 154.5 122 64.8
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.6e-31 140.6 93 77.4
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 2.4e-27 126.7 92 68.5
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.2e-23 114.4 90 64.4
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.6e-23 114.0 61 86.9
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 7.9e-23 111.7 71 70.4
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.5e-21 107.5 55 85.5
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.8e-19 100.5 105 60.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.0e-14 84.7 153 34.6
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.8e-14 84.0 65 66.2
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 7.7e-10 68.6 65 55.4


User provided reference genes

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