Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.3093 Acer truncatum HOM05D001092 ORTHO05D000923 3.0e-60 235.0 117 100.0
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 3.7e-18 95.1 48 95.8
ClCG05G006770 Citrullus lanatus HOM05D001092 ORTHO05D000923 3.7e-18 95.1 52 88.5
Psat0s45g0040 Pisum sativum HOM05D001092 ORTHO05D000923 3.7e-18 95.1 48 95.8
Haze_00822 Corylus avellana HOM05D001092 ORTHO05D000923 4.9e-18 94.7 58 82.8
MELO3C006741.2 Cucumis melo HOM05D001092 ORTHO05D000923 6.4e-18 94.4 48 95.8
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 6.4e-18 94.4 48 95.8
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 6.4e-18 94.4 48 95.8
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 8.3e-18 94.0 48 93.8
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.1e-17 93.6 48 93.8
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 1.4e-17 93.2 48 93.8
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
Peaxi162Scf00290g00313 Petunia axillaris HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 1.9e-17 92.8 48 93.8
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 2.4e-17 92.4 48 93.8
SHI00082 Sapria himalayana HOM05D001092 ORTHO05D000923 2.4e-17 92.4 48 91.7
Cpa.g.sc146.62 Carica papaya HOM05D001092 ORTHO05D000923 3.2e-17 92.0 48 91.7
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 3.2e-17 92.0 48 91.7
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 3.2e-17 92.0 48 91.7
Lj6C698G8 Lonicera japonica HOM05D001092 ORTHO05D000923 4.1e-17 91.7 48 91.7
Atru.chr4.3076 Acer truncatum HOM05D001092 ORTHO05D000923 5.4e-17 91.3 46 95.7
CAN.G824.5 Capsicum annuum HOM05D001092 ORTHO05D000923 5.4e-17 91.3 48 91.7
Nitab4.5_0001977g0050 Nicotiana tabacum HOM05D001092 ORTHO05D000923 5.4e-17 91.3 48 91.7
Nitab4.5_0009459g0020 Nicotiana tabacum HOM05D001092 ORTHO05D000923 5.4e-17 91.3 48 91.7
Solyc09g009370.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 5.4e-17 91.3 48 91.7
Sopen09g004100 Solanum pennellii HOM05D001092 ORTHO05D000923 5.4e-17 91.3 48 91.7
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 7.0e-17 90.9 48 91.7
Oeu033616.1 Olea europaea HOM05D001092 ORTHO05D000923 7.0e-17 90.9 48 91.7
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 7.0e-17 90.9 48 91.7
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 7.0e-17 90.9 48 91.7
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 7.0e-17 90.9 47 91.5
Nn2g14500 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.2e-16 90.1 48 89.6
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.2e-16 90.1 48 89.6
Nn2g16048 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.2e-16 90.1 48 89.6
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 89.6
CAN.G424.45 Capsicum annuum HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 89.6
Gohir.A10G175801 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 91.7
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 91.7
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 91.7
SalBow8G5116 Salvia bowleyana HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 87.5
unitig_578.g15844 Utricularia gibba HOM05D001092 ORTHO05D000923 1.6e-16 89.7 48 89.6
COL.COLO4_34529 Corchorus olitorius HOM05D001092 ORTHO05D000923 2.1e-16 89.4 48 89.6
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 2.1e-16 89.4 48 89.6
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.1e-16 89.4 48 89.6
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.1e-16 89.4 48 89.6
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 2.1e-16 89.4 46 93.5
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 2.1e-16 89.4 48 91.7
Actinidia18490 Actinidia chinensis HOM05D001092 ORTHO05D000923 2.7e-16 89.0 48 89.6
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 2.7e-16 89.0 48 89.6
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 2.7e-16 89.0 48 87.5
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 2.7e-16 89.0 45 95.6
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 3.5e-16 88.6 47 89.4
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 3.5e-16 88.6 47 89.4
arahy.Tifrunner.gnm1.ann1.8VA958 Arachis hypogaea HOM05D001092 ORTHO05D000923 3.5e-16 88.6 48 87.5
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 3.5e-16 88.6 47 89.4
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 3.5e-16 88.6 48 87.5
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.5e-16 88.6 48 89.6
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 3.5e-16 88.6 47 91.5
vmacro07983 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 3.5e-16 88.6 48 87.5
Aqoxy4G01581 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 4.6e-16 88.2 48 87.5
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 4.6e-16 88.2 45 93.3
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 4.6e-16 88.2 48 87.5
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 6.0e-16 87.8 48 87.5
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 6.0e-16 87.8 47 89.4
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 7.8e-16 87.4 47 87.2
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 1.0e-15 87.0 47 89.4
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 1.0e-15 87.0 48 85.4
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 1.0e-15 87.0 47 89.4
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
A08p06860 Brassica napus HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
BraA08t32704Z Brassica rapa HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 87.2
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 89.4
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.3e-15 86.7 47 89.4
Aqoxy2G02587 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.7e-15 86.3 48 85.4
CSS0037314 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.7e-15 86.3 48 87.5
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 1.7e-15 86.3 45 91.1
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 2.3e-15 85.9 47 85.1
HPP92_008100 Vanilla planifolia HOM05D001092 ORTHO05D000923 2.3e-15 85.9 48 83.3
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 3.0e-15 85.5 46 89.1
Os02g0470400 Oryza sativa ssp. japonica HOM05D001092 ORTHO05D000923 3.0e-15 85.5 48 81.2
Zm00001eb203090 Zea mays HOM05D001092 ORTHO05D000923 3.0e-15 85.5 48 81.2
DCAR_026963 Daucus carota HOM05D001092 ORTHO05D000923 3.9e-15 85.1 48 83.3
HanXRQChr10g0319861 Helianthus annuus HOM05D001092 ORTHO05D000923 3.9e-15 85.1 47 85.1
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 3.9e-15 85.1 46 89.1
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 5.1e-15 84.7 47 83.0
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 1.1e-14 83.6 44 90.9
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 1.9e-14 82.8 47 85.1
DCAR_023379 Daucus carota HOM05D001092 ORTHO05D000923 3.3e-14 82.0 48 79.2
unitig_17.g29366 Utricularia gibba HOM05D001092 ORTHO05D000923 7.3e-14 80.9 48 85.4
unitig_8.g4080 Utricularia gibba HOM05D001092 ORTHO05D000923 7.3e-14 80.9 48 85.4
CDE02G0350 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 2.1e-13 79.3 45 84.4
SEGI_16723 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 2.8e-13 79.0 47 80.9
PSO210G1589 Papaver somniferum HOM05D001092 ORTHO05D000923 3.6e-13 78.6 44 86.4
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 1.2e-11 73.6 44 79.5
AUR62003914 Chenopodium quinoa HOM05D001092 ORTHO05D000923 2.0e-11 72.8 44 75.0
AUR62038227 Chenopodium quinoa HOM05D001092 ORTHO05D000923 2.0e-11 72.8 44 75.0
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.0e-11 72.8 44 77.3
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.0e-11 72.8 44 77.3
Mapoly0076s0037 Marchantia polymorpha HOM05D001092 ORTHO05D000923 3.4e-11 72.0 44 75.0
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 9.2e-09 63.9 40 77.5
CBR_g4878 Chara braunii HOM05D001092 ORTHO05D000923 1.6e-08 63.2 73 47.9


User provided reference genes

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