Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 1.7e-244 849.0 462 100.0
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 7.6e-216 753.8 460 88.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 2.8e-210 735.3 462 80.7
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 5.3e-209 731.1 462 81.8
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 1.0e-207 726.9 463 85.1
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 7.2e-206 720.7 462 80.1
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 9.4e-206 720.3 420 85.2
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 2.7e-205 718.8 462 83.3
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 6.1e-205 717.6 462 82.5
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 5.1e-204 714.5 462 81.6
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 5.7e-203 711.1 462 79.0
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 7.4e-203 710.7 463 80.6
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 9.7e-203 710.3 465 82.2
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 2.8e-202 708.8 462 81.2
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 6.3e-202 707.6 462 76.4
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 6.3e-202 707.6 462 79.4
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 6.3e-202 707.6 462 77.1
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 3.1e-201 705.3 462 78.1
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.1e-201 705.3 462 79.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 5.3e-201 704.5 462 76.2
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.2e-200 703.4 462 78.8
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 4.5e-200 701.4 462 80.7
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 7.7e-200 700.7 428 82.7
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.7e-199 699.5 463 76.7
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 5.0e-199 698.0 419 83.8
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 6.5e-199 697.6 463 78.4
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 8.5e-199 697.2 419 83.8
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.4e-198 696.4 428 82.2
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.5e-198 695.7 422 82.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 3.2e-198 695.3 428 83.2
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 2.1e-197 692.6 462 75.1
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 2.7e-197 692.2 462 77.1
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 3.6e-197 691.8 462 74.9
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.6e-197 691.8 462 77.1
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 4.7e-197 691.4 462 77.7
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 6.1e-197 691.0 462 77.3
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 7.9e-197 690.6 467 76.0
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.0e-196 690.3 435 80.9
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.3e-196 689.1 420 81.9
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.3e-196 689.1 463 77.5
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 3.9e-196 688.3 463 77.8
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 4.4e-195 684.9 467 75.2
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 7.4e-195 684.1 467 77.7
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.2e-194 682.6 421 80.5
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 2.8e-194 682.2 489 75.3
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 4.8e-194 681.4 462 75.3
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 7.0e-193 677.6 465 75.1
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 5.0e-191 671.4 462 74.0
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 5.0e-191 671.4 417 78.7
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 6.5e-191 671.0 460 73.5
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 8.5e-191 670.6 462 74.9
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 8.5e-191 670.6 462 73.6
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.5e-190 669.1 462 74.7
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 2.5e-190 669.1 419 79.5
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 9.4e-190 667.2 462 73.4
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.1e-189 666.0 462 74.2
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 6.1e-189 664.5 457 76.1
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.5e-187 659.8 470 76.0
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.7e-186 656.4 421 76.0
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.7e-186 655.2 421 75.8
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.1e-185 653.7 421 77.2
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.1e-185 653.7 469 74.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 4.1e-185 651.7 465 73.3
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.3e-185 651.4 418 76.6
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 7.0e-185 651.0 419 76.8
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 9.1e-185 650.6 422 77.0
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.2e-184 650.2 406 78.1
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.6e-184 649.8 420 77.9
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 2.0e-184 649.4 421 76.0
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.7e-184 649.0 421 77.0
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 2.7e-184 649.0 421 74.3
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 3.5e-184 648.7 421 75.1
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 5.9e-184 647.9 482 69.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.0e-183 647.1 421 77.0
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.7e-183 646.4 421 77.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.9e-183 645.6 465 72.5
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.0e-183 644.8 465 71.4
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.5e-183 644.4 465 73.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 6.5e-183 644.4 421 76.7
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-182 642.5 421 77.0
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 4.2e-182 641.7 421 74.8
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 9.4e-182 640.6 510 66.7
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 9.4e-182 640.6 421 75.3
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 9.4e-182 640.6 421 75.3
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 9.4e-182 640.6 421 75.3
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.2e-181 640.2 465 72.0
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.2e-181 640.2 421 74.1
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.1e-181 639.4 422 74.4
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.6e-181 638.6 419 75.9
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 3.6e-181 638.6 463 72.6
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 8.0e-181 637.5 441 73.0
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.8e-180 636.3 421 74.1
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.3e-180 636.0 422 75.6
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.3e-180 636.0 421 74.1
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 1.2e-179 633.6 422 75.1
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.2e-179 633.6 465 71.4
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 4.4e-179 631.7 421 75.3
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 7.5e-179 630.9 495 68.1
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 8.5e-175 617.5 420 72.4
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.1e-174 617.1 422 72.3
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 5.5e-174 614.8 419 71.4
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.6e-173 613.2 400 75.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.8e-172 609.8 421 72.2
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.8e-172 607.4 418 72.0
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 9.8e-171 604.0 420 69.8
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 7.3e-166 587.8 418 70.1
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 9.5e-166 587.4 416 73.1
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 2.9e-162 575.9 421 68.4
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.1e-161 573.9 400 73.2
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 3.2e-161 572.4 421 67.5
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.4e-145 520.4 317 82.0
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.0e-143 512.7 334 76.6
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.2e-139 500.7 400 62.0
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 2.4e-137 493.0 418 59.3
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.2e-131 474.2 408 57.8
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 6.9e-116 421.8 422 53.8
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 2.3e-103 380.2 275 68.4
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.8e-100 370.5 374 53.2
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 3.8e-98 362.8 542 38.0
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.3e-92 342.4 259 72.2
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 6.1e-80 302.4 188 80.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 7.0e-68 262.3 269 56.5
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 2.3e-58 230.7 185 63.2
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 5.0e-58 229.6 185 62.7
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 5.0e-58 229.6 207 64.3
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.0e-46 191.0 145 68.3
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.3e-42 177.6 148 64.2
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.8e-39 167.9 117 71.8
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 2.0e-35 154.5 125 65.6
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.5e-33 147.5 119 64.7
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.7e-29 134.8 387 28.7
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 3.1e-23 114.0 60 90.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.1e-17 95.5 58 81.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.5e-17 95.1 59 74.6
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 3.1e-15 87.4 70 68.6


User provided reference genes

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