Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.4101 Acer truncatum HOM05D000989 ORTHO05D006109 1.7e-67 259.2 136 100.0
Atru.chr3.4104 Acer truncatum HOM05D000989 ORTHO05D006109 2.1e-65 252.3 136 97.1
Ciclev10028538m.g Citrus clementina HOM05D000989 ORTHO05D006109 2.0e-47 192.6 134 76.1
Thecc.06G052000 Theobroma cacao HOM05D000989 ORTHO05D006109 3.9e-43 178.3 137 71.5
Duzib192G0753 Durio zibethinus HOM05D000989 ORTHO05D006109 9.6e-42 173.7 133 71.4
COL.COLO4_19515 Corchorus olitorius HOM05D000989 ORTHO05D006109 1.8e-40 169.5 134 67.9
Potri.014G001100 Populus trichocarpa HOM05D000989 ORTHO05D006109 9.0e-40 167.2 131 69.5
Gohir.A05G116032 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.5e-39 166.4 133 68.4
TWI12G0396 Tripterygium wilfordii HOM05D000989 ORTHO05D006109 1.5e-39 166.4 129 65.9
Gorai.009G120600 Gossypium raimondii HOM05D000989 ORTHO05D006109 1.7e-38 162.9 134 67.9
QL05p085514 Quercus lobata HOM05D000989 ORTHO05D006109 3.8e-38 161.8 132 66.7
Potri.007G002700 Populus trichocarpa HOM05D000989 ORTHO05D006109 4.9e-38 161.4 131 71.0
Haze_16237 Corylus avellana HOM05D000989 ORTHO05D006109 1.1e-37 160.2 130 65.4
Gohir.D05G116600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.1e-37 160.2 134 67.2
Sabra07G0002000 Salix brachista HOM05D000989 ORTHO05D006109 2.4e-37 159.1 131 69.5
Manes.14G000100 Manihot esculenta HOM05D000989 ORTHO05D006109 4.2e-37 158.3 131 64.1
Sabra14G0002700 Salix brachista HOM05D000989 ORTHO05D006109 5.5e-37 157.9 131 66.4
Duzib235G1336 Durio zibethinus HOM05D000989 ORTHO05D006109 7.1e-37 157.5 129 65.9
Sabra14G0003500 Salix brachista HOM05D000989 ORTHO05D006109 9.3e-37 157.1 131 65.6
Actinidia38817 Actinidia chinensis HOM05D000989 ORTHO05D006109 1.2e-36 156.8 136 61.8
Cfa023514 Carpinus fangiana HOM05D000989 ORTHO05D006109 7.9e-36 154.1 130 63.1
TAR626G0219 Trochodendron aralioides HOM05D000989 ORTHO05D006109 7.9e-36 154.1 132 63.6
TAR626G0832 Trochodendron aralioides HOM05D000989 ORTHO05D006109 7.9e-36 154.1 132 63.6
Lj3g0006607 Lotus japonicus HOM05D000989 ORTHO05D006109 1.3e-35 153.3 132 62.1
Thhalv10011546m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 2.3e-35 152.5 135 57.8
Glyma.08G226000 Glycine max HOM05D000989 ORTHO05D006109 1.5e-34 149.8 134 59.7
Prupe.3G027000 Prunus persica HOM05D000989 ORTHO05D006109 1.9e-34 149.4 130 64.6
CiPaw.01G093100 Carya illinoinensis HOM05D000989 ORTHO05D006109 2.5e-34 149.1 130 60.8
Dinv20318 Davidia involucrata HOM05D000989 ORTHO05D006109 2.5e-34 149.1 136 59.6
Thhalv10020844m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 2.5e-34 149.1 137 60.6
Hma1.2p1_0141F.1_g064000 Hydrangea macrophylla HOM05D000989 ORTHO05D006109 3.3e-34 148.7 136 59.6
Glyma.07G001000 Glycine max HOM05D000989 ORTHO05D006109 5.6e-34 147.9 134 61.2
FvH4_6g36480 Fragaria vesca HOM05D000989 ORTHO05D006109 7.4e-34 147.5 131 62.6
FAN14G2118 Fragaria x ananassa HOM05D000989 ORTHO05D006109 7.4e-34 147.5 131 62.6
Aa31LG10G220 Aethionema arabicum HOM05D000989 ORTHO05D006109 9.6e-34 147.1 138 58.0
RcHm_v2.0_Chr2g0148611 Rosa chinensis HOM05D000989 ORTHO05D006109 9.6e-34 147.1 139 59.0
MD09G1168600 Malus domestica HOM05D000989 ORTHO05D006109 2.1e-33 146.0 132 61.4
Rhsim08G0251900 Rhododendron simsii HOM05D000989 ORTHO05D006109 3.7e-33 145.2 134 59.7
AT3G13062 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 4.8e-33 144.8 137 59.1
AL3G24790 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 6.2e-33 144.4 137 60.6
FAN02G4168 Fragaria x ananassa HOM05D000989 ORTHO05D006109 6.2e-33 144.4 142 62.0
GSVIVG01029461001 Vitis vinifera HOM05D000989 ORTHO05D006109 6.2e-33 144.4 132 62.1
AL1G64210 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 8.2e-33 144.1 133 59.4
BraSC56t46391Z Brassica rapa HOM05D000989 ORTHO05D006109 1.8e-32 142.9 132 59.8
Phvul.010G165300 Phaseolus vulgaris HOM05D000989 ORTHO05D006109 1.8e-32 142.9 134 57.5
BraA03t12954Z Brassica rapa HOM05D000989 ORTHO05D006109 2.4e-32 142.5 137 62.8
Carub.0003s1239 Capsella rubella HOM05D000989 ORTHO05D006109 2.4e-32 142.5 135 60.0
Carub.0001s4457 Capsella rubella HOM05D000989 ORTHO05D006109 4.0e-32 141.7 131 58.8
MD17G1158100 Malus domestica HOM05D000989 ORTHO05D006109 5.3e-32 141.4 132 61.4
Sp1g41570 Schrenkiella parvula HOM05D000989 ORTHO05D006109 5.3e-32 141.4 132 57.6
Eucgr.F04053 Eucalyptus grandis HOM05D000989 ORTHO05D006109 6.9e-32 141.0 132 62.1
FAN05G4662 Fragaria x ananassa HOM05D000989 ORTHO05D006109 6.9e-32 141.0 138 60.1
BcaC08g43665 Brassica carinata HOM05D000989 ORTHO05D006109 9.0e-32 140.6 131 58.8
A03p38020 Brassica napus HOM05D000989 ORTHO05D006109 9.0e-32 140.6 137 62.0
BolC6t36168H Brassica oleracea HOM05D000989 ORTHO05D006109 9.0e-32 140.6 131 58.8
CARHR087630 Cardamine hirsuta HOM05D000989 ORTHO05D006109 9.0e-32 140.6 137 59.1
Nn5g26976 Nelumbo nucifera HOM05D000989 ORTHO05D006109 1.2e-31 140.2 133 58.6
C03p46110 Brassica napus HOM05D000989 ORTHO05D006109 2.6e-31 139.0 137 60.6
BolC3t16883H Brassica oleracea HOM05D000989 ORTHO05D006109 2.6e-31 139.0 137 60.6
TAR383G0471 Trochodendron aralioides HOM05D000989 ORTHO05D006109 2.6e-31 139.0 132 62.1
VMungo0331G0118 Vigna mungo HOM05D000989 ORTHO05D006109 2.6e-31 139.0 132 57.6
AUR62001309 Chenopodium quinoa HOM05D000989 ORTHO05D006109 3.4e-31 138.7 136 55.9
TPR.G38747 Trifolium pratense HOM05D000989 ORTHO05D006109 4.5e-31 138.3 130 60.0
C06p10850 Brassica napus HOM05D000989 ORTHO05D006109 7.6e-31 137.5 131 58.0
Ca_03771_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 7.6e-31 137.5 121 60.3
Medtr4g005140 Medicago truncatula HOM05D000989 ORTHO05D006109 7.6e-31 137.5 129 56.6
CSS0036335 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D006109 1.0e-30 137.1 136 55.9
Sed0020073 Sechium edule HOM05D000989 ORTHO05D006109 1.0e-30 137.1 124 59.7
AT1G55960 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 1.3e-30 136.7 134 56.0
THA.LOC104815704 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 1.3e-30 136.7 136 58.8
EL10Ac7g18115 Beta vulgaris HOM05D000989 ORTHO05D006109 1.7e-30 136.3 135 57.0
FAN09G3581 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.7e-30 136.3 139 56.1
CANSAT01G0659 Cannabis sativa HOM05D000989 ORTHO05D006109 2.9e-30 135.6 133 57.1
CARHR045700 Cardamine hirsuta HOM05D000989 ORTHO05D006109 2.9e-30 135.6 135 56.3
Gorai.005G119500 Gossypium raimondii HOM05D000989 ORTHO05D006109 3.8e-30 135.2 130 58.5
A01p40460 Brassica napus HOM05D000989 ORTHO05D006109 1.1e-29 133.7 138 58.0
Sp3g11220 Schrenkiella parvula HOM05D000989 ORTHO05D006109 1.1e-29 133.7 137 58.4
Lj5A20T31 Lonicera japonica HOM05D000989 ORTHO05D006109 1.9e-29 132.9 142 55.6
BcaB07g33179 Brassica carinata HOM05D000989 ORTHO05D006109 2.5e-29 132.5 125 60.8
Gohir.D02G105300 Gossypium hirsutum HOM05D000989 ORTHO05D006109 2.5e-29 132.5 130 57.7
BraA01t04080Z Brassica rapa HOM05D000570 ORTHO05D006109 3.2e-29 132.1 138 56.5
Migut.I01212 Erythranthe guttata HOM05D000989 ORTHO05D006109 4.2e-29 131.7 128 53.9
PSO063G2540 Papaver somniferum HOM05D000989 ORTHO05D006109 5.5e-29 131.3 137 53.3
PSO170G5971 Papaver somniferum HOM05D000989 ORTHO05D006109 5.5e-29 131.3 137 53.3
Gohir.A03G088600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 9.3e-29 130.6 129 55.8
Psat7g264760 Pisum sativum HOM05D000570 ORTHO05D001174 1.6e-28 129.8 119 59.7
Nitab4.5_0000499g0090 Nicotiana tabacum HOM05D000989 ORTHO05D006109 2.1e-28 129.4 133 54.9
THA.LOC104822743 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 2.1e-28 129.4 136 55.1
C01p52050 Brassica napus HOM05D000989 ORTHO05D006109 2.7e-28 129.0 138 55.8
BolC1t05148H Brassica oleracea HOM05D000989 ORTHO05D006109 2.7e-28 129.0 138 55.8
HanXRQChr09g0277441 Helianthus annuus HOM05D000989 ORTHO05D006109 2.7e-28 129.0 127 53.5
Lsat_1_v5_gn_4_106160 Lactuca sativa HOM05D000989 ORTHO05D006109 2.7e-28 129.0 123 52.0
MBI16_g00831_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 2.7e-28 129.0 128 55.5
Aqoxy7G02659 Aquilegia oxysepala HOM05D000989 ORTHO05D006109 4.6e-28 128.3 133 55.6
MELO3C023731.2 Cucumis melo HOM05D000989 ORTHO05D006109 4.6e-28 128.3 123 58.5
arahy.Tifrunner.gnm1.ann1.ECX43N Arachis hypogaea HOM05D000989 ORTHO05D006109 7.9e-28 127.5 135 53.3
CsaV3_3G020170 Cucumis sativus L. HOM05D000989 ORTHO05D006109 1.0e-27 127.1 124 59.7
SalBow6G4719 Salvia bowleyana HOM05D000989 ORTHO05D006109 1.3e-27 126.7 132 54.5
BcaC01g04007 Brassica carinata HOM05D000989 ORTHO05D006109 1.8e-27 126.3 136 58.1
Hund05662 Selenicereus undatus HOM05D000989 ORTHO05D006109 2.3e-27 125.9 136 51.5
Nn8g41214 Nelumbo nucifera HOM05D000989 ORTHO05D006109 3.0e-27 125.6 136 52.2
ClCG05G012260 Citrullus lanatus HOM05D000989 ORTHO05D006109 3.9e-27 125.2 124 58.1
DCAR_007676 Daucus carota HOM05D000989 ORTHO05D006109 3.9e-27 125.2 135 54.8
PGR102G0324 Punica granatum HOM05D000989 ORTHO05D006109 6.7e-27 124.4 132 56.1
SGA_v2.0_scaffold122G33258 Striga asiatica HOM05D000989 ORTHO05D006109 8.7e-27 124.0 129 53.5
AUR62025691 Chenopodium quinoa HOM05D000989 ORTHO05D006109 2.2e-25 119.4 125 52.8
MSTRG.11572 Avicennia marina HOM05D000989 ORTHO05D006109 2.8e-25 119.0 138 52.2
Oeu035084.1 Olea europaea HOM05D000989 ORTHO05D006109 3.7e-25 118.6 135 48.1
ATR0626G329 Amborella trichopoda HOM05D000989 ORTHO05D006109 4.8e-25 118.2 130 54.6
CAN.G790.1 Capsicum annuum HOM05D000989 ORTHO05D006109 4.8e-25 118.2 134 53.7
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 4.8e-25 118.2 121 49.6
Ah.08g217990 Amaranthus hybridus HOM05D000989 ORTHO05D006109 6.3e-25 117.9 132 47.0
SGA_v2.0_scaffold71G24021 Striga asiatica HOM05D000989 ORTHO05D006109 1.8e-24 116.3 133 50.4
ECA232G1648 Erigeron canadensis HOM05D000989 ORTHO05D006109 2.4e-24 115.9 118 50.0
Cc04_g00100 Coffea canephora HOM05D000989 ORTHO05D006109 3.1e-24 115.5 127 51.2
Peaxi162Scf00684g00414 Petunia axillaris HOM05D000989 ORTHO05D006109 6.9e-24 114.4 123 52.8
CDE05G1780 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 9.0e-24 114.0 130 54.6
Solyc03g124060.3 Solanum lycopersicum HOM05D000989 ORTHO05D006109 2.6e-23 112.5 138 50.0
Sopen03g041790 Solanum pennellii HOM05D000989 ORTHO05D006109 2.6e-23 112.5 138 50.0
CDE05G3314 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 2.9e-22 109.0 130 53.1
Nitab4.5_0004098g0010 Nicotiana tabacum HOM05D000989 ORTHO05D006109 3.6e-20 102.1 133 47.4
arahy.Tifrunner.gnm1.ann1.FCN3VB Arachis hypogaea HOM05D000989 ORTHO05D006109 4.6e-20 101.7 178 41.0
Sc15g0001170 Simmondsia chinensis HOM05D000989 ORTHO05D006109 1.8e-19 99.8 135 48.1
PGSC0003DMG400009197 Solanum tuberosum HOM05D000989 ORTHO05D006109 5.1e-19 98.2 138 44.9
Zm00001eb240920 Zea mays HOM05D000989 ORTHO05D006109 1.1e-18 97.1 132 42.4
Zm00001eb082000 Zea mays HOM05D000989 ORTHO05D006109 3.3e-18 95.5 132 41.7
Pp3c23_14010 Physcomitrium patens HOM05D000989 ORTHO05D006109 9.7e-18 94.0 128 42.2
vmacro18725 Vaccinium macrocarpon HOM05D000989 ORTHO05D006109 6.3e-17 91.3 242 31.8
HPP92_018325 Vanilla planifolia HOM05D000989 ORTHO05D006109 6.3e-17 91.3 134 41.8
SEGI_20704 Sequoiadendron giganteum HOM05D000989 ORTHO05D006109 1.5e-15 86.7 135 43.0
Os02g0468400 Oryza sativa ssp. japonica HOM05D000989 ORTHO05D006109 5.0e-14 81.6 136 36.8
Mapoly0020s0077 Marchantia polymorpha HOM05D000989 ORTHO05D006109 8.8e-11 70.9 120 39.2
Cpa.g.sc10.6 Carica papaya HOM05D000989 ORTHO05D006109 1.1e-10 70.5 44 77.3
SMO364G0840 Selaginella moellendorffii HOM05D000989 ORTHO05D006109 1.5e-10 70.1 120 37.5
SGA_v2.0_scaffold71G24020 Striga asiatica HOM05D000011 ORTHO05D000018 1.5e-10 70.1 89 47.2
RcHm_v2.0_Chr1g0356301 Rosa chinensis HOM05D000989 ORTHO05D006109 4.4e-10 68.6 46 69.6
AagrBONN_evm.TU.Sc2ySwM_117.3861 Anthoceros agrestis HOM05D000989 ORTHO05D006109 9.7e-10 67.4 133 37.6
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 1.8e-08 63.2 95 38.9


User provided reference genes

Program Settings