Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 3.7e-140 501.5 252 100.0
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.5e-91 339.3 254 72.4
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 5.5e-91 338.2 246 74.4
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 6.0e-90 334.7 243 73.7
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 4.3e-88 328.6 235 71.1
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 7.4e-88 327.8 251 68.5
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 7.4e-88 327.8 251 68.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 9.6e-88 327.4 235 71.1
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.3e-87 327.0 282 65.6
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.6e-87 326.6 242 74.0
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.8e-86 323.2 236 71.2
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.8e-86 323.2 235 74.9
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 3.4e-85 318.9 185 83.8
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.5e-85 318.5 234 72.6
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 5.8e-85 318.2 257 65.8
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 7.6e-85 317.8 245 68.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 7.6e-85 317.8 245 68.2
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.8e-84 315.5 232 72.8
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.9e-84 315.1 173 86.7
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 7.1e-83 311.2 180 82.2
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 7.1e-83 311.2 229 69.9
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 9.3e-83 310.8 254 66.1
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.2e-82 310.5 249 66.3
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.6e-82 310.1 245 67.3
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.7e-82 309.3 171 84.8
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 4.6e-82 308.5 215 72.1
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 7.9e-82 307.8 245 65.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 7.9e-82 307.8 261 63.6
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.0e-81 307.4 246 66.3
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.3e-81 307.0 257 65.0
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.3e-81 306.2 252 67.1
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 3.9e-81 305.4 232 68.5
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.5e-80 303.5 261 64.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.9e-80 303.1 237 68.4
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.5e-80 302.8 171 83.6
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 2.5e-80 302.8 179 82.1
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.3e-80 302.4 182 81.3
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 3.3e-80 302.4 258 63.6
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.2e-79 299.7 172 83.7
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 3.7e-79 298.9 236 67.4
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 4.8e-79 298.5 181 80.1
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.4e-78 297.0 235 66.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 5.3e-78 295.0 239 66.5
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.0e-77 293.1 158 86.7
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 2.6e-77 292.7 239 65.7
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 3.4e-77 292.4 228 66.7
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 4.5e-77 292.0 180 78.9
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 7.7e-77 291.2 241 65.6
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.0e-76 290.8 175 79.4
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.7e-76 290.0 234 67.9
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 3.8e-76 288.9 244 64.8
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 6.5e-76 288.1 245 64.5
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 8.5e-76 287.7 211 70.1
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.5e-75 286.2 257 60.7
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.5e-75 286.2 257 60.7
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.5e-75 286.2 249 63.9
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 3.2e-75 285.8 168 79.2
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 3.2e-75 285.8 175 78.3
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 3.2e-75 285.8 172 82.6
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.2e-75 285.4 245 63.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 5.5e-75 285.0 258 60.5
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 9.4e-75 284.3 229 65.5
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.2e-74 283.9 230 65.7
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.2e-74 283.9 230 65.7
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.2e-74 283.9 230 65.7
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.2e-74 283.9 245 63.7
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.2e-74 283.9 176 78.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.6e-74 283.5 183 77.6
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.6e-74 282.3 238 63.4
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 3.6e-74 282.3 221 66.5
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.6e-74 282.3 246 64.2
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 6.1e-74 281.6 222 67.1
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 7.9e-74 281.2 232 64.7
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 7.9e-74 281.2 228 65.8
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 1.0e-73 280.8 173 75.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.0e-73 280.8 230 64.8
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.0e-73 280.8 251 61.4
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.8e-73 280.0 229 66.8
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.8e-73 280.0 242 62.8
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 2.3e-73 279.6 166 80.1
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 5.1e-73 278.5 168 79.2
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 8.8e-73 277.7 245 61.6
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.1e-72 277.3 167 79.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 4.3e-72 275.4 247 59.9
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 8.2e-71 271.2 178 72.5
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 9.1e-70 267.7 185 70.3
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 2.9e-68 262.7 194 68.6
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.1e-67 260.8 267 55.8
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 6.1e-66 255.0 183 68.3
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.0e-65 252.7 195 67.7
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 5.7e-64 248.4 160 76.2
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.1e-62 241.1 182 65.4
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.2e-60 236.5 164 67.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 8.0e-58 228.0 213 61.5
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 8.0e-58 228.0 175 64.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 3.9e-57 225.7 200 66.5
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 5.2e-57 225.3 188 60.1
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 6.7e-57 224.9 178 64.0
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 9.1e-54 214.5 239 54.8
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 8.5e-52 208.0 131 73.3
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.4e-49 200.7 126 73.0
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 8.8e-49 198.0 115 80.0
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.7e-47 193.7 115 78.3
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.4e-46 189.9 233 49.8
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.0e-45 186.8 115 75.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 4.5e-45 185.7 115 75.7
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 5.0e-44 182.2 116 74.1
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.0e-41 174.5 111 81.1
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.5e-40 170.6 183 49.2
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 4.4e-40 169.1 135 71.1
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.2e-37 161.0 109 70.6
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 5.9e-37 158.7 177 47.5
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.0e-36 157.9 142 61.3
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 9.2e-22 108.2 154 39.0
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 4.7e-18 95.9 120 49.2
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.4e-14 84.3 57 71.9
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 3.5e-13 79.7 180 27.8
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.3e-12 77.0 177 27.7
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.5e-11 74.3 188 27.1
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.6e-08 63.5 49 63.3
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.3e-07 61.2 60 56.7


User provided reference genes

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