Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.7e-218 762.3 365 100.0
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.9e-121 439.9 245 82.4
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.1e-108 397.5 243 75.7
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 4.6e-107 392.1 238 75.2
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 2.3e-106 389.8 245 71.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.2e-104 381.7 245 70.2
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 8.1e-104 381.3 252 71.0
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 6.9e-103 378.3 240 72.1
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 3.8e-101 372.5 245 70.2
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 4.9e-101 372.1 245 71.0
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 6.5e-101 371.7 246 70.7
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 4.2e-100 369.0 244 68.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.3e-100 367.9 245 67.8
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 2.7e-99 366.3 245 67.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 1.8e-98 363.6 245 69.4
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 4.3e-97 359.0 245 67.8
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 7.4e-97 358.2 236 69.1
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.3e-96 357.5 245 69.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 6.2e-96 355.1 241 68.0
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.1e-95 354.4 241 68.0
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-95 354.4 253 64.8
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 3.1e-95 352.8 240 66.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 6.9e-95 351.7 243 63.8
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.2e-94 350.9 244 64.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.5e-94 350.5 244 66.0
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.5e-94 350.5 245 69.0
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.0e-94 350.1 243 67.1
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.0e-94 350.1 241 67.2
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.0e-94 350.1 243 65.0
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 3.4e-94 349.4 241 67.6
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-92 344.4 241 65.1
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.4e-92 344.0 256 62.9
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 1.9e-92 343.6 244 63.5
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.2e-92 342.8 245 62.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.2e-92 342.8 246 61.8
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 7.2e-92 341.7 250 60.4
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 2.1e-91 340.1 246 61.8
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 2.1e-91 340.1 246 61.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 4.6e-91 339.0 246 61.8
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 6.1e-91 338.6 243 63.0
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.0e-90 337.8 241 63.5
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 1.0e-90 337.8 244 63.1
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.3e-90 337.4 248 59.7
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 4.3e-89 332.4 245 60.4
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 6.3e-88 328.6 240 64.2
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 4.1e-87 325.9 243 60.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.5e-86 323.9 244 60.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 4.2e-84 315.8 247 61.9
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.7e-83 313.2 245 58.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 3.6e-83 312.8 241 59.8
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 4.6e-83 312.4 244 59.4
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 4.6e-83 312.4 245 62.4
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 6.1e-83 312.0 245 58.0
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.3e-82 310.1 249 60.2
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.5e-81 306.6 226 61.5
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 3.3e-81 306.2 241 56.0
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 4.8e-80 302.4 245 61.2
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 8.5e-77 291.6 224 58.5
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.0e-74 284.6 215 60.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 8.8e-74 281.6 238 53.4
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 8.8e-74 281.6 222 61.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.0e-69 265.8 276 50.0
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.5e-65 254.2 218 53.2
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.3e-64 251.1 239 53.6
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.7e-64 250.8 242 47.1
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 2.6e-57 226.9 253 41.5
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 1.1e-55 221.5 230 50.9
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 1.6e-54 217.6 177 56.5
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 3.5e-54 216.5 243 39.9
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.3e-53 214.5 241 39.4
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 7.2e-52 208.8 153 60.1
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.2e-50 202.6 177 52.5
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.7e-48 196.4 268 40.7
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 2.0e-46 190.7 177 51.4
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.2e-35 154.8 109 63.3
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 5.2e-34 149.4 107 68.2
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 9.8e-25 118.6 72 68.1
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 2.4e-23 114.0 90 58.9
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.5e-20 104.8 181 40.9
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 6.2e-19 99.4 260 28.8
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 3.2e-15 87.0 62 64.5
Thecc.01G078800 Theobroma cacao HOM05D031548 ORTHO05D014449 4.4e-09 66.6 60 63.3
COL.COLO4_11638 Corchorus olitorius HOM05D031548 ORTHO05D014449 7.1e-07 59.3 62 54.8


User provided reference genes

Program Settings