Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.443 Acer truncatum HOM05D001354 ORTHO05D037937 5.0e-42 174.1 93 100.0
Atru.chr9.2523 Acer truncatum HOM05D001354 ORTHO05D037937 3.3e-09 65.1 70 58.6
Os01g0772800 Oryza sativa ssp. japonica HOM05D001354 ORTHO05D002582 1.8e-07 59.3 75 50.7
Atru.chr1.2894 Acer truncatum HOM05D001354 ORTHO05D002582 6.9e-07 57.4 75 49.3
Atru.chr1.2899 Acer truncatum HOM05D001354 ORTHO05D002582 6.9e-07 57.4 89 47.2
CDE04G2225 Ceratophyllum demersum HOM05D001354 ORTHO05D002582 9.0e-07 57.0 75 48.0
CDE02G0107 Ceratophyllum demersum HOM05D001354 ORTHO05D002582 2.0e-06 55.8 75 48.0
Phvul.010G156800 Phaseolus vulgaris HOM05D001354 ORTHO05D002582 2.0e-06 55.8 75 46.7
Migut.I00754 Erythranthe guttata HOM05D001354 ORTHO05D002582 2.6e-06 55.5 75 46.7
SalBow2G1608 Salvia bowleyana HOM05D001354 ORTHO05D014520 2.6e-06 55.5 75 46.7
MSTRG.11148 Avicennia marina HOM05D001354 ORTHO05D002582 3.4e-06 55.1 75 48.0
Glyma.07G029200 Glycine max HOM05D001354 ORTHO05D002582 3.4e-06 55.1 75 46.7
VMungo0331G0245 Vigna mungo HOM05D001354 ORTHO05D002582 3.4e-06 55.1 75 46.7
MSTRG.22753 Avicennia marina HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 46.7
CANSAT56G2642 Cannabis sativa HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 45.3
DCAR_025520 Daucus carota HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 48.0
Lj5C74G15 Lonicera japonica HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 48.0
Potri.016G112800 Populus trichocarpa HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 48.0
Sabra16G0108500 Salix brachista HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 48.0
Solyc12g042740.2 Solanum lycopersicum HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 46.7
Sopen12g021920 Solanum pennellii HOM05D001354 ORTHO05D002582 4.4e-06 54.7 75 46.7
unitig_744.g24451 Utricularia gibba HOM05D001354 ORTHO05D014520 4.4e-06 54.7 93 39.8
MD17G1213700 Malus domestica HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 46.7
Nitab4.5_0001271g0100 Nicotiana tabacum HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 46.7
Nitab4.5_0003157g0040 Nicotiana tabacum HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 46.7
Peaxi162Scf00332g00534 Petunia axillaris HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 48.0
Sabra16G0154300 Salix brachista HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 44.0
PGSC0003DMG400028629 Solanum tuberosum HOM05D001354 ORTHO05D002582 5.8e-06 54.3 75 46.7
arahy.Tifrunner.gnm1.ann1.5IPV2R Arachis hypogaea HOM05D001354 ORTHO05D002582 7.6e-06 53.9 75 45.3
arahy.Tifrunner.gnm1.ann1.UV9SWK Arachis hypogaea HOM05D001354 ORTHO05D002582 7.6e-06 53.9 75 45.3
AUR62011509 Chenopodium quinoa HOM05D001354 ORTHO05D002582 7.6e-06 53.9 75 46.7
AUR62016327 Chenopodium quinoa HOM05D001354 ORTHO05D002582 7.6e-06 53.9 75 46.7
Nn3g20753 Nelumbo nucifera HOM05D001354 ORTHO05D002582 7.6e-06 53.9 75 45.3
ECA232G4844 Erigeron canadensis HOM05D001354 ORTHO05D002582 9.9e-06 53.5 75 46.7
Glyma.08G213600 Glycine max HOM05D001354 ORTHO05D002582 9.9e-06 53.5 75 45.3
Rhsim08G0212200 Rhododendron simsii HOM05D001354 ORTHO05D002582 9.9e-06 53.5 75 46.7
vmacro19007 Vaccinium macrocarpon HOM05D001354 ORTHO05D002582 9.9e-06 53.5 75 46.7


User provided reference genes

Program Settings