Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1098 Acer truncatum HOM05D000886 ORTHO05D010551 1.7e-111 406.0 203 100.0
Atru.chr2.1104 Acer truncatum HOM05D000886 ORTHO05D000525 1.7e-79 299.7 184 86.4
Duzib128G1006 Durio zibethinus HOM05D000886 ORTHO05D000525 6.5e-26 121.7 172 44.8
COL.COLO4_03543 Corchorus olitorius HOM05D000886 ORTHO05D000525 1.0e-23 114.4 177 39.0
COL.COLO4_15529 Corchorus olitorius HOM05D008427 ORTHO05D010551 3.0e-23 112.8 201 36.8
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.1e-22 110.9 172 40.1
Atru.chr2.1095 Acer truncatum HOM05D008427 ORTHO05D010551 3.7e-21 105.9 165 40.0
Thecc.05G267100 Theobroma cacao HOM05D008427 ORTHO05D010551 3.1e-20 102.8 209 35.9
Thecc.05G267200 Theobroma cacao HOM05D008427 ORTHO05D010551 4.1e-20 102.4 209 36.8
Atru.chr2.1085 Acer truncatum HOM05D008427 ORTHO05D010551 3.4e-19 99.4 169 36.7
COL.COLO4_15525 Corchorus olitorius HOM05D000886 ORTHO05D000525 2.9e-18 96.3 157 40.1
FvH4_3g21850 Fragaria vesca HOM05D000886 ORTHO05D010551 2.9e-18 96.3 203 33.0
FAN11G0335 Fragaria x ananassa HOM05D000886 ORTHO05D010551 2.9e-18 96.3 203 33.0
Sabra13G0045300 Salix brachista HOM05D000886 ORTHO05D000525 2.9e-18 96.3 181 34.8
Atru.chr2.1081 Acer truncatum HOM05D008427 ORTHO05D010551 2.5e-17 93.2 176 35.2
Prupe.4G202600 Prunus persica HOM05D008427 ORTHO05D010551 4.2e-17 92.4 172 36.6
RcHm_v2.0_Chr5g0037631 Rosa chinensis HOM05D008427 ORTHO05D010551 4.2e-17 92.4 173 34.7
Potri.013G049000 Populus trichocarpa HOM05D000886 ORTHO05D010551 9.4e-17 91.3 181 32.6
SHI23918 Sapria himalayana HOM05D008427 ORTHO05D000525 1.4e-15 87.4 236 27.5
Sabra19G0033300 Salix brachista HOM05D008427 ORTHO05D010551 2.5e-14 83.2 198 28.8
Ca_10270_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 5.7e-14 82.0 166 34.9
Potri.019G021900 Populus trichocarpa HOM05D008427 ORTHO05D010551 7.4e-14 81.6 198 28.8
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 6.3e-13 78.6 169 34.3
Gohir.A11G245100 Gossypium hirsutum HOM05D000886 ORTHO05D000525 8.2e-13 78.2 171 32.7
Atru.chr2.1074 Acer truncatum HOM05D008427 ORTHO05D010551 5.3e-12 75.5 130 34.6
Haze_14765 Corylus avellana HOM05D000087 ORTHO05D001941 5.3e-12 75.5 182 31.9
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.3e-12 75.5 192 30.2
Atru.chr2.1092 Acer truncatum HOM05D000886 ORTHO05D010551 1.5e-11 73.9 173 31.2
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.5e-11 73.9 168 31.5
Nitab4.5_0003544g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.0e-11 73.6 192 29.2
Aqoxy2G02686 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.7e-10 70.5 198 28.8
Ca_09164_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 2.2e-10 70.1 193 26.9
Phvul.007G212800 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 2.2e-10 70.1 193 30.6
QL02p073879 Quercus lobata HOM05D000886 ORTHO05D000525 2.2e-10 70.1 205 30.7
arahy.Tifrunner.gnm1.ann1.3SM0CX Arachis hypogaea HOM05D000886 ORTHO05D000525 2.9e-10 69.7 174 32.2
Atru.chr2.1077 Acer truncatum HOM05D008427 ORTHO05D010551 3.8e-10 69.3 168 31.5
CAN.G1076.28 Capsicum annuum HOM05D000886 ORTHO05D000525 6.5e-10 68.6 173 32.4
Ah.13g077280 Amaranthus hybridus HOM05D000886 ORTHO05D000525 8.5e-10 68.2 183 27.9
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 1.4e-09 67.4 196 28.1
TPR.G1588 Trifolium pratense HOM05D000886 ORTHO05D000525 1.4e-09 67.4 170 28.8
PGSC0003DMG400042198 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.9e-09 67.0 173 30.6
GSVIVG01025807001 Vitis vinifera HOM05D000886 ORTHO05D000525 3.2e-09 66.2 192 30.2
COL.COLO4_23200 Corchorus olitorius HOM05D000886 ORTHO05D000525 4.2e-09 65.9 150 32.7
Lj5g0012682 Lotus japonicus HOM05D000886 ORTHO05D000525 4.2e-09 65.9 166 31.9
Psat3g135440 Pisum sativum HOM05D000886 ORTHO05D000525 4.2e-09 65.9 179 28.5
Atru.chr2.1102 Acer truncatum HOM05D008427 ORTHO05D010551 7.2e-09 65.1 122 31.1
Ciclev10006543m.g Citrus clementina HOM05D000886 ORTHO05D000525 7.2e-09 65.1 178 29.2
Glyma.12G144600 Glycine max HOM05D000886 ORTHO05D000525 9.4e-09 64.7 179 26.3
SHI02776 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 64.3 182 29.1
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.6e-08 63.9 176 31.8
Ca_09165_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.6e-08 63.9 181 27.6
Nitab4.5_0004525g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.1e-08 63.5 173 31.8
TPR.G38682 Trifolium pratense HOM05D000886 ORTHO05D000525 2.1e-08 63.5 176 29.0
Nitab4.5_0001338g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.7e-08 63.2 173 30.1
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.7e-08 63.2 166 27.7
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 3.6e-08 62.8 175 30.9
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 3.6e-08 62.8 165 32.7
Nitab4.5_0001338g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.7e-08 62.4 173 31.2
TPR.G31753 Trifolium pratense HOM05D000886 ORTHO05D000525 4.7e-08 62.4 187 31.0
Peaxi162Scf01061g00003 Petunia axillaris HOM05D000886 ORTHO05D000525 6.1e-08 62.0 173 29.5
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 1.8e-07 60.5 174 29.3
Manes.08G161704 Manihot esculenta HOM05D000886 ORTHO05D000525 1.8e-07 60.5 195 27.2
TPR.G40213 Trifolium pratense HOM05D000886 ORTHO05D000525 1.8e-07 60.5 171 30.4
Gohir.D07G133800 Gossypium hirsutum HOM05D000886 ORTHO05D000525 2.3e-07 60.1 169 24.3
Lj2A411T32 Lonicera japonica HOM05D000886 ORTHO05D000525 2.3e-07 60.1 173 27.2
Os01g0660500 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 2.3e-07 60.1 179 27.9
Pp3c2_23990 Physcomitrium patens HOM05D000886 ORTHO05D000525 2.3e-07 60.1 164 29.9
TWI36G0422 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 2.3e-07 60.1 174 27.0
Atru.chr2.1072 Acer truncatum HOM05D008427 ORTHO05D010551 3.0e-07 59.7 147 32.0
Lj6g0001850 Lotus japonicus HOM05D000886 ORTHO05D000525 3.9e-07 59.3 153 28.1
Solyc01g100670.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 3.9e-07 59.3 173 28.3
Sopen01g044180 Solanum pennellii HOM05D000886 ORTHO05D000525 3.9e-07 59.3 173 29.5
Atru.chr2.3250 Acer truncatum HOM05D000886 ORTHO05D052304 5.1e-07 58.9 73 46.6
Ah.13g077260 Amaranthus hybridus HOM05D000886 ORTHO05D000525 5.1e-07 58.9 184 27.7
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 5.1e-07 58.9 169 27.8
PGSC0003DMG400037105 Solanum tuberosum HOM05D000886 ORTHO05D000525 5.1e-07 58.9 173 28.9
Ciclev10023267m.g Citrus clementina HOM05D000886 ORTHO05D000525 6.7e-07 58.5 178 27.0
Gorai.001G145100 Gossypium raimondii HOM05D000886 ORTHO05D000525 6.7e-07 58.5 172 24.4
Lj1g0028206 Lotus japonicus HOM05D000886 ORTHO05D000525 6.7e-07 58.5 202 25.7
TPR.G38597 Trifolium pratense HOM05D000886 ORTHO05D000525 6.7e-07 58.5 168 25.6
Cfa016273 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.5e-06 57.4 177 28.8
Aqoxy3G03479 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.0e-06 57.0 170 28.2
Ca_10271_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 2.0e-06 57.0 120 34.2
FAN21G0926 Fragaria x ananassa HOM05D000886 ORTHO05D000525 2.0e-06 57.0 171 28.7
Phvul.002G068500 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 2.0e-06 57.0 198 24.2
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 2.6e-06 56.6 174 26.4
TWI18G0454 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 2.6e-06 56.6 178 27.5
TAR636G3206 Trochodendron aralioides HOM05D000886 ORTHO05D000525 2.6e-06 56.6 175 27.4
Atru.chr5.962 Acer truncatum HOM05D000886 ORTHO05D000525 3.3e-06 56.2 173 27.2
ClCG10G016300 Citrullus lanatus HOM05D000886 ORTHO05D000525 3.3e-06 56.2 169 26.0
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 4.4e-06 55.8 168 29.2
Gohir.D12G125400 Gossypium hirsutum HOM05D007899 ORTHO05D010282 4.4e-06 55.8 149 30.2
Hma1.2p1_0662F.1_g198230 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 4.4e-06 55.8 170 26.5
EL10Ac3g07297 Beta vulgaris HOM05D000886 ORTHO05D000525 5.7e-06 55.5 180 27.2
Cfa005760 Carpinus fangiana HOM05D000886 ORTHO05D000525 5.7e-06 55.5 165 29.1
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 5.7e-06 55.5 149 34.2
AUR62024614 Chenopodium quinoa HOM05D000886 ORTHO05D000525 5.7e-06 55.5 176 27.3
Gohir.A12G121800 Gossypium hirsutum HOM05D007899 ORTHO05D010282 5.7e-06 55.5 171 26.9
TPR.G39393 Trifolium pratense HOM05D000886 ORTHO05D000525 5.7e-06 55.5 166 30.1
Aqoxy7G04062 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 7.4e-06 55.1 174 29.3
ECA234G2044 Erigeron canadensis HOM05D000886 ORTHO05D000525 7.4e-06 55.1 170 28.8
Sopen12g031440 Solanum pennellii HOM05D000886 ORTHO05D000525 7.4e-06 55.1 168 28.0
Aqoxy2G02679 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 9.7e-06 54.7 174 25.9
Gorai.008G136400 Gossypium raimondii HOM05D007899 ORTHO05D010282 9.7e-06 54.7 149 29.5
Lj4g0026929 Lotus japonicus HOM05D000886 ORTHO05D000525 9.7e-06 54.7 191 24.6


User provided reference genes

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