Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.158 Acer truncatum HOM05D003614 ORTHO05D004156 4.0e-63 244.6 124 100.0
Atru.chr1.3323 Acer truncatum HOM05D003614 ORTHO05D001674 8.2e-48 193.7 104 92.3
Atru.chr4.881 Acer truncatum HOM05D003614 ORTHO05D004156 1.7e-29 132.9 91 76.9
Potri.005G063750 Populus trichocarpa HOM05D003614 ORTHO05D004156 5.7e-17 91.3 82 61.0
Sabra05G0053000 Salix brachista HOM05D003614 ORTHO05D004156 3.7e-16 88.6 77 62.3
Dinv07113 Davidia involucrata HOM05D003614 ORTHO05D004156 6.3e-16 87.8 78 62.8
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 4.5e-14 81.6 76 57.9
CSS0046512 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 5.9e-14 81.3 76 55.3
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 5.9e-14 81.3 64 64.1
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 2.9e-13 79.0 81 55.6
Rhsim10G0133600 Rhododendron simsii HOM05D003614 ORTHO05D004156 2.9e-13 79.0 76 55.3
Cfa002904 Carpinus fangiana HOM05D003614 ORTHO05D004156 3.8e-13 78.6 76 53.9
Gohir.D09G211130 Gossypium hirsutum HOM05D003614 ORTHO05D004156 6.5e-13 77.8 83 54.2
Actinidia06613 Actinidia chinensis HOM05D003614 ORTHO05D004156 1.1e-12 77.0 75 56.0
Gohir.A09G213532 Gossypium hirsutum HOM05D003614 ORTHO05D004156 1.9e-12 76.3 83 53.0
TAR628G1743 Trochodendron aralioides HOM05D003614 ORTHO05D004156 1.9e-12 76.3 79 54.4
Rhsim10G0133200 Rhododendron simsii HOM05D003614 ORTHO05D004156 7.2e-12 74.3 85 49.4
Cpa.g.sc42.164 Carica papaya HOM05D003614 ORTHO05D004156 1.2e-11 73.6 56 67.9
COL.COLO4_35758 Corchorus olitorius HOM05D003614 ORTHO05D004156 1.2e-11 73.6 95 48.4
CANSAT11G2476 Cannabis sativa HOM05D003614 ORTHO05D004156 1.6e-11 73.2 78 53.8
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 2.1e-11 72.8 77 54.5
vmacro12792 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 2.1e-11 72.8 114 43.9
QL10p043434 Quercus lobata HOM05D003614 ORTHO05D004156 4.7e-11 71.6 77 50.6
MELO3C008840.2 Cucumis melo HOM05D003614 ORTHO05D004156 6.1e-11 71.2 65 58.5
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 3.0e-10 68.9 67 52.2
MD02G1287300 Malus domestica HOM05D003614 ORTHO05D004156 3.0e-10 68.9 60 60.0
FAN03G2482 Fragaria x ananassa HOM05D003614 ORTHO05D004156 4.0e-10 68.6 58 62.1
Sc03g0004310 Simmondsia chinensis HOM05D003614 ORTHO05D004156 4.0e-10 68.6 78 50.0
FAN06G2474 Fragaria x ananassa HOM05D003614 ORTHO05D004156 5.2e-10 68.2 63 58.7
FvH4_7g02870 Fragaria vesca HOM05D003614 ORTHO05D004156 6.8e-10 67.8 63 58.7
PGR119G0394 Punica granatum HOM05D003614 ORTHO05D004156 6.8e-10 67.8 82 41.5
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 1.5e-09 66.6 106 41.5
C06p48510 Brassica napus HOM05D003614 ORTHO05D004156 4.4e-09 65.1 94 44.7
TWI74G0358 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 4.4e-09 65.1 47 72.3
Sp5g29510 Schrenkiella parvula HOM05D003614 ORTHO05D004156 5.7e-09 64.7 62 54.8
MSTRG.10382 Avicennia marina HOM05D003614 ORTHO05D004156 9.8e-09 63.9 62 54.8
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 9.8e-09 63.9 106 40.6
Nn3g18642 Nelumbo nucifera HOM05D003614 ORTHO05D004156 1.7e-08 63.2 80 46.2
BolC6t39880H Brassica oleracea HOM05D003614 ORTHO05D004156 2.2e-08 62.8 97 42.3
HanXRQChr17g0536801 Helianthus annuus HOM05D003614 ORTHO05D004156 2.2e-08 62.8 54 57.4
Aa31LG4G4600 Aethionema arabicum HOM05D003614 ORTHO05D004156 3.7e-08 62.0 52 59.6
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea HOM05D003614 ORTHO05D004156 3.7e-08 62.0 77 46.8
SHI13956 Sapria himalayana HOM05D003614 ORTHO05D004156 4.9e-08 61.6 67 55.2
BcaC08g46865 Brassica carinata HOM05D003614 ORTHO05D004156 6.3e-08 61.2 66 50.0
Rhsim10G0133500 Rhododendron simsii HOM05D003614 ORTHO05D004156 6.3e-08 61.2 49 61.2
BraA07t31560Z Brassica rapa HOM05D003614 ORTHO05D004156 8.3e-08 60.8 94 44.7
PGSC0003DMG400008935 Solanum tuberosum HOM05D003614 ORTHO05D004156 1.4e-07 60.1 46 67.4
A07p40160 Brassica napus HOM05D003614 ORTHO05D004156 1.8e-07 59.7 53 60.4
AT1G74350 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 3.1e-07 58.9 57 56.1
Aqoxy6G00302 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 5.4e-07 58.2 79 43.0
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.0e-06 56.2 71 47.9
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 4.5e-06 55.1 48 58.3


User provided reference genes

Program Settings