Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1338 Acer truncatum HOM05D005112 ORTHO05D006681 1.6e-117 426.0 197 100.0
RcHm_v2.0_Chr1g0324261 Rosa chinensis HOM05D005112 ORTHO05D006681 2.1e-98 362.5 195 81.0
Dinv32028 Davidia involucrata HOM05D005112 ORTHO05D006681 6.1e-98 360.9 194 83.5
Thecc.10G157000 Theobroma cacao HOM05D005112 ORTHO05D006681 1.8e-97 359.4 197 82.2
FAN10G2928 Fragaria x ananassa HOM05D005112 ORTHO05D006681 2.3e-97 359.0 195 80.5
FAN10G3804 Fragaria x ananassa HOM05D005112 ORTHO05D006681 2.3e-97 359.0 195 80.5
MD02G1287500 Malus domestica HOM05D005112 ORTHO05D006681 4.0e-97 358.2 195 80.0
FvH4_7g03060 Fragaria vesca HOM05D005112 ORTHO05D006681 5.2e-97 357.8 195 80.0
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 6.8e-97 357.5 194 80.4
CiPaw.13G013600 Carya illinoinensis HOM05D005112 ORTHO05D006681 8.9e-97 357.1 198 80.8
FAN03G1408 Fragaria x ananassa HOM05D005112 ORTHO05D006681 1.2e-96 356.7 195 80.0
Cfa010916 Carpinus fangiana HOM05D005112 ORTHO05D006681 5.8e-96 354.4 198 81.3
COL.COLO4_20752 Corchorus olitorius HOM05D005112 ORTHO05D006681 1.3e-95 353.2 197 79.7
Sabra03G0146500 Salix brachista HOM05D005112 ORTHO05D006681 1.3e-95 353.2 197 79.2
GSVIVG01013489001 Vitis vinifera HOM05D005112 ORTHO05D006681 1.7e-95 352.8 195 80.5
Potri.001G027400 Populus trichocarpa HOM05D005112 ORTHO05D006681 1.4e-94 349.7 197 79.2
Prupe.2G035800 Prunus persica HOM05D005112 ORTHO05D006681 1.4e-94 349.7 197 78.7
Cpa.g.sc540.3 Carica papaya HOM05D005112 ORTHO05D006681 1.9e-94 349.4 197 75.6
QL04p017903 Quercus lobata HOM05D005112 ORTHO05D006681 1.9e-94 349.4 197 80.2
Ciclev10027821m.g Citrus clementina HOM05D005112 ORTHO05D006681 3.2e-94 348.6 196 81.1
ClCG05G026800 Citrullus lanatus HOM05D005112 ORTHO05D006681 4.1e-94 348.2 195 76.9
Potri.003G196500 Populus trichocarpa HOM05D005112 ORTHO05D006681 5.4e-94 347.8 197 78.7
PGR044G1764 Punica granatum HOM05D005112 ORTHO05D006681 5.4e-94 347.8 192 77.6
Actinidia02264 Actinidia chinensis HOM05D005112 ORTHO05D006681 7.0e-94 347.4 194 77.3
Thhalv10010080m.g Eutrema salsugineum HOM05D005112 ORTHO05D006681 7.0e-94 347.4 192 78.6
Gohir.D06G185100 Gossypium hirsutum HOM05D005112 ORTHO05D006681 2.0e-93 345.9 197 76.6
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 2.7e-93 345.5 193 78.8
TAR636G2362 Trochodendron aralioides HOM05D005112 ORTHO05D006681 3.5e-93 345.1 192 77.6
AL5G35490 Arabidopsis lyrata HOM05D005112 ORTHO05D006681 4.6e-93 344.7 192 77.6
BraA04t16238Z Brassica rapa HOM05D005112 ORTHO05D006681 7.8e-93 344.0 195 76.4
Duzib114G0621 Durio zibethinus HOM05D005112 ORTHO05D006681 1.0e-92 343.6 197 78.7
Nn7g36668 Nelumbo nucifera HOM05D005112 ORTHO05D006681 1.3e-92 343.2 195 76.4
CsaV3_5G036760 Cucumis sativus L. HOM05D005112 ORTHO05D006681 2.3e-92 342.4 194 75.3
Gohir.A06G175300 Gossypium hirsutum HOM05D005112 ORTHO05D006681 2.3e-92 342.4 197 76.6
Gorai.010G216500 Gossypium raimondii HOM05D005112 ORTHO05D006681 3.0e-92 342.0 197 76.1
TAR636G0153 Trochodendron aralioides HOM05D005112 ORTHO05D006681 3.0e-92 342.0 192 77.1
TPR.G27820 Trifolium pratense HOM05D005112 ORTHO05D006681 3.9e-92 341.7 196 75.0
TWI38G0195 Tripterygium wilfordii HOM05D005112 ORTHO05D006681 3.9e-92 341.7 195 76.9
Manes.04G159700 Manihot esculenta HOM05D005112 ORTHO05D006681 5.0e-92 341.3 197 76.1
Medtr8g039160 Medicago truncatula HOM05D005112 ORTHO05D006681 5.0e-92 341.3 196 75.5
Sed0008595 Sechium edule HOM05D005112 ORTHO05D006681 5.0e-92 341.3 194 76.8
Peaxi162Scf00767g00521 Petunia axillaris HOM05D005112 ORTHO05D006681 8.6e-92 340.5 195 75.9
Prupe.2G035600 Prunus persica HOM05D005112 ORTHO05D006681 8.6e-92 340.5 197 77.2
THA.LOC104824194 Tarenaya hassleriana HOM05D005112 ORTHO05D006681 8.6e-92 340.5 195 76.4
Lj3g0016153 Lotus japonicus HOM05D005112 ORTHO05D006681 1.1e-91 340.1 196 74.5
Sp5g07980 Schrenkiella parvula HOM05D005112 ORTHO05D006681 1.1e-91 340.1 192 77.1
Ca_23958_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.5e-91 339.7 196 74.0
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.5e-91 339.7 196 74.0
Glyma.13G197000 Glycine max HOM05D005112 ORTHO05D006681 1.9e-91 339.3 196 75.0
BcaB02g08488 Brassica carinata HOM05D005112 ORTHO05D006681 3.3e-91 338.6 192 76.0
Lj9C664G6 Lonicera japonica HOM05D005112 ORTHO05D006681 4.3e-91 338.2 196 75.5
Aqoxy2G00366 Aquilegia oxysepala HOM05D005112 ORTHO05D006681 9.5e-91 337.0 197 73.6
Carub.0005s2104 Capsella rubella HOM05D005112 ORTHO05D006681 9.5e-91 337.0 192 75.5
Migut.B01228 Erythranthe guttata HOM05D005112 ORTHO05D006681 9.5e-91 337.0 195 75.9
MSTRG.20515 Avicennia marina HOM05D005112 ORTHO05D006681 2.1e-90 335.9 195 74.4
Eucgr.J01181 Eucalyptus grandis HOM05D005112 ORTHO05D006681 2.1e-90 335.9 194 74.2
BcaC02g09069 Brassica carinata HOM05D005112 ORTHO05D006681 2.8e-90 335.5 183 78.1
Sopen08g005470 Solanum pennellii HOM05D005112 ORTHO05D006681 3.6e-90 335.1 193 74.1
Nitab4.5_0002123g0040 Nicotiana tabacum HOM05D005112 ORTHO05D006681 4.7e-90 334.7 193 75.1
Nitab4.5_0000013g0140 Nicotiana tabacum HOM05D005112 ORTHO05D006681 8.0e-90 334.0 193 74.6
Hma1.2p1_1202F.1_g266830 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 1.1e-89 333.6 186 79.0
Lalb_Chr01g0007751 Lupinus albus HOM05D005112 ORTHO05D006681 1.4e-89 333.2 194 74.2
Solyc08g014480.4 Solanum lycopersicum HOM05D005112 ORTHO05D006681 1.8e-89 332.8 193 73.6
MELO3C012472.2 Cucumis melo HOM05D005112 ORTHO05D006681 2.3e-89 332.4 198 72.7
Aa31LG10G13430 Aethionema arabicum HOM05D005112 ORTHO05D006681 3.1e-89 332.0 195 73.8
Cc02_g30230 Coffea canephora HOM05D005112 ORTHO05D006681 3.1e-89 332.0 193 75.1
Phvul.011G206800 Phaseolus vulgaris HOM05D005112 ORTHO05D006681 5.2e-89 331.3 194 75.3
SGA_v2.0_scaffold124G33611 Striga asiatica HOM05D005112 ORTHO05D006681 5.2e-89 331.3 196 75.5
C04p38070 Brassica napus HOM05D005112 ORTHO05D006681 8.9e-89 330.5 185 77.3
CSS0041800 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 1.2e-88 330.1 199 74.4
HanXRQChr14g0446561 Helianthus annuus HOM05D005112 ORTHO05D006681 1.5e-88 329.7 193 74.6
AT3G54440 Arabidopsis thaliana HOM05D005112 ORTHO05D006681 2.0e-88 329.3 192 75.0
A04p05380 Brassica napus HOM05D005112 ORTHO05D006681 1.3e-87 326.6 184 77.7
AUR62026862 Chenopodium quinoa HOM05D005112 ORTHO05D006681 1.3e-87 326.6 195 71.8
BolC4t25382H Brassica oleracea HOM05D005112 ORTHO05D006681 1.7e-87 326.2 184 76.6
Psat4g144800 Pisum sativum HOM05D005112 ORTHO05D006681 2.9e-87 325.5 195 71.8
VMungo1127G0803 Vigna mungo HOM05D005112 ORTHO05D006681 2.9e-87 325.5 194 73.7
EL10Ac2g02802 Beta vulgaris HOM05D005112 ORTHO05D006681 3.7e-87 325.1 195 71.3
MBI09_g12849_MAGBIO Magnolia biondii HOM05D005112 ORTHO05D006681 3.7e-87 325.1 193 74.1
DCAR_006636 Daucus carota HOM05D005112 ORTHO05D006681 1.1e-86 323.6 192 70.8
PSO339G5424 Papaver somniferum HOM05D005112 ORTHO05D006681 1.1e-86 323.6 198 72.7
CAN.G176.1 Capsicum annuum HOM05D005112 ORTHO05D006681 1.4e-86 323.2 192 72.9
Sc14g0005780 Simmondsia chinensis HOM05D005112 ORTHO05D006681 1.4e-86 323.2 194 72.2
vmacro12696 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 1.4e-86 323.2 194 73.7
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 3.2e-86 322.0 175 79.4
unitig_22.g5425 Utricularia gibba HOM05D005112 ORTHO05D006681 3.2e-86 322.0 193 72.0
ECA238G0687 Erigeron canadensis HOM05D005112 ORTHO05D006681 4.1e-86 321.6 193 72.0
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea HOM05D005112 ORTHO05D006681 7.0e-86 320.9 193 71.0
Sabra01G0019900 Salix brachista HOM05D005112 ORTHO05D006681 1.6e-85 319.7 249 62.2
CANSAT56G3144 Cannabis sativa HOM05D005112 ORTHO05D006681 2.7e-85 318.9 197 71.1
AUR62032651 Chenopodium quinoa HOM05D005112 ORTHO05D006681 3.5e-85 318.5 210 67.1
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea HOM05D005112 ORTHO05D006681 6.0e-85 317.8 195 70.8
CDE08G0398 Ceratophyllum demersum HOM05D005112 ORTHO05D006681 1.0e-84 317.0 192 70.8
ATR0745G067 Amborella trichopoda HOM05D005112 ORTHO05D006681 7.3e-83 310.8 192 68.2
Os01g0952600 Oryza sativa ssp. japonica HOM05D005112 ORTHO05D006681 1.4e-81 306.6 190 69.5
Lsat_1_v5_gn_2_64381 Lactuca sativa HOM05D005112 ORTHO05D006681 3.1e-81 305.4 177 75.1
Pp3c7_1630 Physcomitrium patens HOM05D005112 ORTHO05D006681 1.7e-71 273.1 195 60.5
SMO266G0060 Selaginella moellendorffii HOM05D005112 ORTHO05D006681 2.9e-71 272.3 193 59.6
Zm00001eb140720 Zea mays HOM05D005112 ORTHO05D006681 6.6e-68 261.2 168 65.5
Mapoly0086s0033 Marchantia polymorpha HOM05D005112 ORTHO05D006681 1.1e-67 260.4 198 58.1
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis HOM05D005112 ORTHO05D006681 2.6e-64 249.2 185 57.8
CBR_g32018 Chara braunii HOM05D005112 ORTHO05D006681 1.7e-55 219.9 189 52.9
ATR0980G009 Amborella trichopoda HOM05D005112 ORTHO05D006681 1.3e-31 140.6 88 64.8
HPP92_012095 Vanilla planifolia HOM05D005112 ORTHO05D006681 1.3e-31 140.6 84 72.6
Cre08.g379450 Chlamydomonas reinhardtii HOM05D005112 ORTHO05D006681 1.3e-23 114.0 224 30.8
Haze_03042 Corylus avellana HOM05D005112 ORTHO05D006681 5.7e-19 98.6 61 72.1
C08p29650 Brassica napus HOM05D000711 ORTHO05D000545 2.5e-06 56.6 35 71.4
BolC8t50571H Brassica oleracea HOM05D000711 ORTHO05D000545 2.5e-06 56.6 35 71.4
BolC8t50574H Brassica oleracea HOM05D000711 ORTHO05D000545 2.5e-06 56.6 35 71.4


User provided reference genes

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