Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.9e-104 382.5 188 100.0
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 8.3e-68 260.8 184 73.9
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 2.8e-63 245.7 188 70.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.4e-62 243.4 198 66.2
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.8e-61 237.3 187 70.6
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.7e-60 236.5 187 70.6
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 4.9e-60 235.0 194 64.4
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.3e-60 234.2 182 69.2
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.1e-59 232.3 184 66.8
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 5.4e-59 231.5 171 66.1
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 7.0e-59 231.1 204 63.2
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 7.0e-59 231.1 188 66.0
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 5.9e-58 228.0 147 72.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 5.9e-58 228.0 147 72.8
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.3e-57 226.1 126 81.0
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.3e-57 226.1 202 60.4
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 5.0e-57 224.9 194 66.0
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 8.6e-57 224.2 196 59.7
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.1e-56 223.8 166 66.3
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 1.5e-56 223.4 179 63.1
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 1.5e-56 223.4 184 63.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.9e-56 223.0 171 65.5
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 1.9e-56 223.0 191 62.3
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 1.9e-56 223.0 193 64.8
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.9e-56 223.0 118 84.7
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 9.5e-56 220.7 201 61.2
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.6e-55 219.9 114 82.5
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.1e-55 219.5 174 64.4
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 2.8e-55 219.2 181 65.2
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.8e-55 219.2 168 66.7
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.8e-55 219.2 168 66.7
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 3.6e-55 218.8 173 64.2
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 3.6e-55 218.8 195 61.5
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 6.1e-55 218.0 181 62.4
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.0e-55 217.6 191 58.1
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.0e-54 217.2 176 63.6
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.4e-54 216.9 172 62.8
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-54 216.5 174 63.8
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-54 216.5 174 63.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.3e-54 216.1 186 64.0
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 4.0e-54 215.3 176 63.1
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 4.0e-54 215.3 176 63.6
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 5.2e-54 214.9 184 59.8
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 5.2e-54 214.9 187 60.4
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 6.8e-54 214.5 112 85.7
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 6.8e-54 214.5 185 65.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 8.9e-54 214.2 184 64.7
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 1.5e-53 213.4 166 64.5
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 2.0e-53 213.0 139 69.8
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.0e-53 213.0 183 66.7
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 3.4e-53 212.2 184 58.7
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 3.4e-53 212.2 184 58.7
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.4e-53 212.2 110 87.3
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 4.4e-53 211.8 190 58.9
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 4.4e-53 211.8 184 59.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 7.5e-53 211.1 116 81.0
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 9.8e-53 210.7 182 64.3
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 9.8e-53 210.7 184 59.2
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 9.8e-53 210.7 184 59.2
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-52 209.9 187 59.4
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.2e-52 209.5 173 61.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 2.2e-52 209.5 180 60.6
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 2.2e-52 209.5 113 83.2
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.9e-52 209.1 186 59.7
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.9e-52 208.4 172 66.3
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 6.4e-52 208.0 180 61.7
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 6.4e-52 208.0 123 77.2
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 1.4e-51 206.8 167 63.5
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.8e-51 206.5 160 63.1
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.2e-51 205.7 167 62.9
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 5.4e-51 204.9 182 58.8
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 9.2e-51 204.1 172 65.7
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.2e-50 203.8 182 61.0
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.2e-50 203.8 180 61.1
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 2.0e-50 203.0 183 58.5
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.7e-50 202.6 180 60.0
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.5e-50 202.2 114 80.7
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 3.5e-50 202.2 179 60.3
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.6e-50 201.8 181 60.8
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 7.8e-50 201.1 184 57.1
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.0e-49 200.7 170 62.9
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.7e-49 199.9 110 80.0
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.7e-49 199.9 168 60.1
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.9e-49 198.7 112 80.4
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 6.6e-49 198.0 180 59.4
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 6.6e-49 198.0 185 57.8
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.9e-48 196.4 182 56.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 3.6e-47 192.2 152 62.5
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 4.7e-47 191.8 183 57.9
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.7e-47 191.8 111 80.2
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 8.0e-47 191.0 164 62.2
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.4e-46 190.3 184 57.6
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.9e-43 179.9 112 73.2
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 9.2e-43 177.6 197 52.8
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 3.3e-40 169.1 101 73.3
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 3.3e-40 169.1 116 68.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.3e-40 169.1 116 68.1
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 8.9e-38 161.0 91 78.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 8.9e-38 161.0 179 46.9
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 4.4e-37 158.7 120 60.0
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.5e-34 149.1 108 63.0
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.0e-33 146.0 134 53.7
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.0e-33 146.0 106 62.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.1e-33 145.2 179 44.7
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 6.6e-33 144.8 108 60.2
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 6.6e-33 144.8 123 55.3
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 8.6e-33 144.4 170 49.4
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 8.6e-33 144.4 105 62.9
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.1e-32 144.1 127 55.9
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 4.3e-32 142.1 103 61.2
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 7.3e-32 141.4 117 56.4
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 9.5e-32 141.0 111 57.7
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 9.5e-32 141.0 122 54.1
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.6e-31 140.2 108 59.3
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.1e-31 139.8 162 43.2
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.8e-31 139.4 117 56.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 3.6e-31 139.0 181 44.8
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.7e-31 138.7 117 56.4
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 6.2e-31 138.3 170 45.9
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 6.2e-31 138.3 105 60.0
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.1e-31 137.9 166 45.8
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 8.1e-31 137.9 107 57.9
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.4e-30 137.1 109 56.0
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 1.8e-30 136.7 179 42.5
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.1e-30 136.0 119 53.8
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 4.0e-30 135.6 109 55.0
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 4.0e-30 135.6 117 53.0
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 5.2e-30 135.2 106 54.7
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 5.2e-30 135.2 109 56.9
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 6.8e-30 134.8 112 57.1
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.5e-29 133.7 153 49.7
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.5e-29 133.7 103 58.3
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.5e-29 133.7 109 55.0
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.0e-29 133.3 160 43.8
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 2.0e-29 133.3 185 42.2
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 2.6e-29 132.9 115 52.2
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.4e-29 132.1 111 55.0
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.3e-28 130.6 150 42.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 1.7e-28 130.2 109 55.0
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-28 130.2 109 55.0
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-28 130.2 109 55.0
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.7e-28 130.2 103 56.3
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.4e-28 128.3 109 54.1
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.9e-27 126.7 94 61.7
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.2e-27 125.9 137 45.3
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.4e-27 125.2 63 87.3
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 7.1e-27 124.8 180 41.1
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 7.1e-27 124.8 63 84.1
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.6e-26 123.6 109 50.5
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 2.1e-26 123.2 115 50.4
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 7.8e-26 121.3 97 56.7
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.3e-25 119.8 193 38.9
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.0e-25 119.4 105 50.5
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 3.9e-25 119.0 110 55.5
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.9e-25 119.0 102 56.9
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 5.1e-25 118.6 106 50.0
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 3.3e-24 115.9 120 46.7
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 5.2e-22 108.6 113 48.7
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 5.2e-22 108.6 113 48.7
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 9.0e-22 107.8 178 43.3
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-21 107.5 59 76.3
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 3.4e-21 105.9 58 75.9
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 1.7e-20 103.6 259 31.3
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.7e-20 103.6 98 55.1
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 2.1e-18 96.7 107 45.8
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 6.0e-18 95.1 91 49.5
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 7.8e-18 94.7 282 28.7
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 9.6e-16 87.8 59 62.7
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 4.0e-14 82.4 124 46.0
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 4.9e-12 75.5 78 47.4
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.7e-10 69.7 95 35.8
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.1e-08 64.3 47 59.6
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 7.4e-08 61.6 60 46.7
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 2.1e-07 60.1 47 59.6
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 6.2e-07 58.5 47 57.4
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 6.2e-07 58.5 43 62.8
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 3.1e-06 56.2 56 48.2
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 3.1e-06 56.2 108 35.2
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.9e-06 55.1 47 48.9
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 6.9e-06 55.1 74 41.9
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 6.9e-06 55.1 47 51.1


User provided reference genes

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