Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 2.6e-109 398.7 191 100.0
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 4.1e-107 391.3 191 97.4
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 3.9e-105 384.8 191 95.3
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 6.6e-105 384.0 191 95.3
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 8.6e-105 383.6 191 95.8
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 2.5e-104 382.1 191 95.3
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 3.3e-104 381.7 191 94.8
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 5.6e-104 380.9 191 94.8
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 1.2e-103 379.8 191 94.2
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 2.8e-103 378.6 191 93.2
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 4.7e-103 377.9 189 93.7
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 8.0e-103 377.1 191 93.2
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.4e-102 376.3 189 93.1
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 1.8e-102 375.9 188 93.6
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 2.3e-102 375.6 188 93.1
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 2.3e-102 375.6 191 93.7
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.1e-102 375.2 192 93.2
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 5.2e-102 374.4 192 93.2
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.9e-102 373.6 186 94.6
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.9e-102 373.6 186 94.6
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.9e-102 373.6 186 94.6
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.2e-101 373.2 188 93.6
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 192 92.7
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.5e-101 372.9 192 92.7
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 2.0e-101 372.5 185 94.6
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 91.7
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 2.6e-101 372.1 191 90.6
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 2.6e-101 372.1 192 92.7
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 3.4e-101 371.7 191 90.1
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 4.4e-101 371.3 189 91.5
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 4.4e-101 371.3 191 90.1
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 4.4e-101 371.3 191 89.5
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 4.4e-101 371.3 192 92.7
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 5.8e-101 370.9 191 91.6
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 5.8e-101 370.9 191 91.6
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 5.8e-101 370.9 192 91.7
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 5.8e-101 370.9 186 93.5
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 7.5e-101 370.5 192 91.1
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 9.8e-101 370.2 193 91.2
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 9.8e-101 370.2 191 89.5
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 9.8e-101 370.2 191 91.1
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 9.8e-101 370.2 186 93.0
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.3e-100 369.8 188 92.6
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.1
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 94.1
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 2.9e-100 368.6 191 90.1
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 2.9e-100 368.6 192 91.7
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 3.7e-100 368.2 191 90.6
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 4.9e-100 367.9 189 89.9
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 6.4e-100 367.5 185 93.5
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 6.4e-100 367.5 191 89.5
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 89.4
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 89.4
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 89.4
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 91.5
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 91.5
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 8.3e-100 367.1 186 91.9
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 8.3e-100 367.1 186 91.9
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 8.3e-100 367.1 186 91.9
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 8.3e-100 367.1 192 90.6
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 8.3e-100 367.1 192 90.6
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 8.3e-100 367.1 188 91.5
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 8.3e-100 367.1 192 90.1
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 8.3e-100 367.1 188 92.6
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.1e-99 366.7 203 88.2
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 1.1e-99 366.7 191 89.0
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 92.4
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 91.9
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 93.0
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 92.4
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 93.0
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 1.4e-99 366.3 188 89.9
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 1.4e-99 366.3 192 90.6
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 91.9
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 1.9e-99 365.9 189 88.9
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 1.9e-99 365.9 192 90.6
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 1.9e-99 365.9 191 89.5
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 1.9e-99 365.9 189 89.4
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 2.4e-99 365.5 189 89.4
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 2.4e-99 365.5 189 89.4
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.2e-99 365.2 191 89.5
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 3.2e-99 365.2 193 89.6
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 3.2e-99 365.2 185 93.0
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 3.2e-99 365.2 185 91.9
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 3.2e-99 365.2 188 91.5
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 3.2e-99 365.2 188 91.5
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 4.1e-99 364.8 186 91.4
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 5.4e-99 364.4 189 88.9
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 5.4e-99 364.4 189 88.9
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 5.4e-99 364.4 189 88.9
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 5.4e-99 364.4 186 91.9
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 7.0e-99 364.0 189 87.8
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 7.0e-99 364.0 192 89.6
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 9.2e-99 363.6 184 92.4
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 9.2e-99 363.6 186 90.9
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 9.2e-99 363.6 188 91.0
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 9.2e-99 363.6 188 91.0
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 9.2e-99 363.6 185 92.4
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 1.2e-98 363.2 188 91.0
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 1.6e-98 362.8 191 89.5
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 2.0e-98 362.5 189 88.9
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 2.0e-98 362.5 189 88.9
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 2.0e-98 362.5 189 88.9
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 2.0e-98 362.5 191 90.1
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 2.0e-98 362.5 183 92.9
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 2.0e-98 362.5 192 88.5
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 4.6e-98 361.3 191 88.0
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 4.6e-98 361.3 189 89.9
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 7.8e-98 360.5 187 90.9
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 1.0e-97 360.1 192 89.1
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 1.0e-97 360.1 188 89.9
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.3e-97 359.8 183 92.3
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.7e-97 359.4 186 91.4
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 2.3e-97 359.0 188 88.3
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 3.0e-97 358.6 186 89.2
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 5.0e-97 357.8 208 83.2
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 5.0e-97 357.8 197 86.3
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 6.6e-97 357.5 189 87.3
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 6.6e-97 357.5 189 86.8
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 8.6e-97 357.1 189 87.3
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 1.1e-96 356.7 186 89.2
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 1.5e-96 356.3 186 89.8
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 88.7
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 4.3e-96 354.8 186 88.2
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 2.1e-95 352.4 182 90.1
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 3.6e-95 351.7 186 88.7
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 8.1e-95 350.5 191 88.0
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 4.0e-94 348.2 181 89.0
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 1.2e-93 346.7 189 84.7
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 9.8e-93 343.6 182 88.5
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.1e-91 338.2 187 88.2
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 4.6e-90 334.7 258 66.7
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 1.7e-89 332.8 183 82.0
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 7.3e-88 327.4 182 85.2
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 1.2e-85 320.1 161 91.9
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 3.4e-85 318.5 191 79.1
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 7.8e-82 307.4 185 81.1
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 3.9e-81 305.1 162 86.4
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 2.2e-76 289.3 143 93.0
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 7.1e-75 284.3 141 94.3
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 2.1e-74 282.7 141 93.6
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 6.6e-73 277.7 142 90.1
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.6e-69 265.8 130 92.3
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.9e-67 259.6 187 72.7
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 5.4e-67 258.1 164 78.0
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 1.6e-66 256.5 128 91.4
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 7.9e-66 254.2 138 85.5
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 2.5e-64 249.2 185 70.8
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.3e-64 248.4 143 82.5
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 3.2e-59 232.3 188 55.3
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 2.5e-56 222.6 189 55.6
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 7.6e-53 211.1 166 66.9
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 5.7e-48 194.9 157 65.0
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 7.6e-45 184.5 90 91.1
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.2e-42 177.2 115 73.0
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.1e-42 174.9 90 87.8
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.8e-41 173.3 103 77.7
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 5.1e-41 171.8 87 87.4
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 8.7e-41 171.0 87 87.4
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.9e-40 169.9 87 87.4
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.3e-40 169.1 87 87.4
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 5.7e-40 168.3 87 86.2
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 5.7e-40 168.3 87 86.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.4e-38 162.9 157 55.4
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 2.0e-37 159.8 142 61.3
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 2.6e-37 159.5 101 79.2
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.3e-36 157.1 87 83.9
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.1e-34 148.3 79 84.8
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 4.4e-32 142.1 69 85.5
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 1.3e-31 140.6 70 97.1
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.8e-25 120.2 62 83.9
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 4.4e-16 89.0 51 90.2
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 5.7e-16 88.6 44 93.2
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 1.7e-12 77.0 44 81.8


User provided reference genes

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