Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1523 Acer truncatum HOM05D002721 ORTHO05D030750 6.9e-44 180.3 91 100.0
Sabra10G0104500 Salix brachista HOM05D002721 ORTHO05D002919 4.8e-13 77.8 71 57.7
MD16G1053400 Malus domestica HOM05D002721 ORTHO05D002919 3.1e-12 75.1 78 51.3
Potri.010G135900 Populus trichocarpa HOM05D002721 ORTHO05D002919 1.2e-11 73.2 76 53.9
Haze_11843 Corylus avellana HOM05D002721 ORTHO05D002919 4.5e-11 71.2 81 44.4
FvH4_4g28890 Fragaria vesca HOM05D002721 ORTHO05D002919 1.3e-10 69.7 78 46.2
FAN12G1937 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.3e-10 69.7 78 46.2
Cfa008829 Carpinus fangiana HOM05D002721 ORTHO05D002919 1.7e-10 69.3 81 43.2
FAN22G0742 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.7e-10 69.3 78 46.2
Prupe.1G297300 Prunus persica HOM05D002721 ORTHO05D002919 5.0e-10 67.8 78 47.4
RcHm_v2.0_Chr4g0437011 Rosa chinensis HOM05D002721 ORTHO05D002919 5.0e-10 67.8 78 44.9
Cpa.g.sc570.3 Carica papaya HOM05D002721 ORTHO05D002919 1.1e-09 66.6 61 55.7
FAN17G0692 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.1e-09 66.6 78 44.9
Actinidia13414 Actinidia chinensis HOM05D002721 ORTHO05D002919 1.9e-09 65.9 75 49.3
CSS0049515 Camellia sinensis var. sinensis HOM05D002721 ORTHO05D002919 1.9e-09 65.9 68 50.0
Cpa.g.sc1414.3 Carica papaya HOM05D002721 ORTHO05D002919 1.9e-09 65.9 61 55.7
TWI75G0211 Tripterygium wilfordii HOM05D002721 ORTHO05D002919 1.9e-09 65.9 82 47.6
TPR.G2672 Trifolium pratense HOM05D002721 ORTHO05D002919 4.2e-09 64.7 80 43.8
QL03p073121 Quercus lobata HOM05D002721 ORTHO05D002919 5.5e-09 64.3 78 43.6
TAR371G1157 Trochodendron aralioides HOM05D002721 ORTHO05D002919 5.5e-09 64.3 75 45.3
CANSAT64G0632 Cannabis sativa HOM05D002721 ORTHO05D002919 1.2e-08 63.2 50 62.0
vmacro10459 Vaccinium macrocarpon HOM05D002721 ORTHO05D002919 1.2e-08 63.2 82 43.9
Hma1.2p1_1348F.1_g277310 Hydrangea macrophylla HOM05D002721 ORTHO05D002919 2.1e-08 62.4 79 43.0
FAN07G0888 Fragaria x ananassa HOM05D002721 ORTHO05D002919 2.7e-08 62.0 61 50.8
MELO3C005176.2 Cucumis melo HOM05D002721 ORTHO05D002919 3.6e-08 61.6 50 60.0
TAR629G3028 Trochodendron aralioides HOM05D002721 ORTHO05D002919 3.6e-08 61.6 74 43.2
Sed0004629 Sechium edule HOM05D002721 ORTHO05D002919 6.1e-08 60.8 50 56.0
ClCG01G007340 Citrullus lanatus HOM05D002721 ORTHO05D002919 7.9e-08 60.5 50 56.0
Dinv15572 Davidia involucrata HOM05D002721 ORTHO05D002919 7.9e-08 60.5 73 42.5
MD13G1054600 Malus domestica HOM05D002721 ORTHO05D002919 7.9e-08 60.5 56 55.4
Aa31sc12G170 Aethionema arabicum HOM05D002721 ORTHO05D002919 1.0e-07 60.1 61 49.2
COL.COLO4_27771 Corchorus olitorius HOM05D002721 ORTHO05D002919 1.8e-07 59.3 73 45.2
Dinv33997 Davidia involucrata HOM05D002721 ORTHO05D002919 1.8e-07 59.3 79 43.0
Thecc.02G319900 Theobroma cacao HOM05D002721 ORTHO05D002919 3.0e-07 58.5 84 46.4
Lj6A772G33 Lonicera japonica HOM05D002721 ORTHO05D002919 3.9e-07 58.2 73 43.8
Nitab4.5_0006377g0010 Nicotiana tabacum HOM05D002721 ORTHO05D002919 3.9e-07 58.2 76 40.8
GSVIVG01010127001 Vitis vinifera HOM05D002721 ORTHO05D002919 3.9e-07 58.2 52 53.8
RcHm_v2.0_Chr1g0319921 Rosa chinensis HOM05D045915 ORTHO05D030750 5.1e-07 57.8 53 54.7
Nn7g36612 Nelumbo nucifera HOM05D002721 ORTHO05D002919 6.7e-07 57.4 74 41.9
Aqoxy3G00575 Aquilegia oxysepala HOM05D002721 ORTHO05D002919 8.8e-07 57.0 78 41.0
CsaV3_5G018810 Cucumis sativus L. HOM05D002721 ORTHO05D002919 8.8e-07 57.0 46 60.9
Peaxi162Scf00188g00812 Petunia axillaris HOM05D002721 ORTHO05D002919 1.1e-06 56.6 68 41.2
Rhsim09G0119600 Rhododendron simsii HOM05D002721 ORTHO05D002919 1.1e-06 56.6 74 44.6
Sp5g24050 Schrenkiella parvula HOM05D002721 ORTHO05D002919 1.1e-06 56.6 59 50.8
arahy.Tifrunner.gnm1.ann1.B0WRJ9 Arachis hypogaea HOM05D002721 ORTHO05D002919 1.5e-06 56.2 59 47.5
arahy.Tifrunner.gnm1.ann1.EIW9IC Arachis hypogaea HOM05D002721 ORTHO05D002919 1.5e-06 56.2 59 47.5
Dinv34891 Davidia involucrata HOM05D002721 ORTHO05D002919 2.0e-06 55.8 76 39.5
RcHm_v2.0_Chr7g0212341 Rosa chinensis HOM05D045915 ORTHO05D030750 2.6e-06 55.5 53 52.8
Duzib251G0850 Durio zibethinus HOM05D002721 ORTHO05D002919 3.3e-06 55.1 84 44.0
Thhalv10018242m.g Eutrema salsugineum HOM05D002721 ORTHO05D002919 3.3e-06 55.1 54 50.0
Lj2g0017371 Lotus japonicus HOM05D002721 ORTHO05D002919 3.3e-06 55.1 78 38.5
Solyc05g010590.4 Solanum lycopersicum HOM05D002721 ORTHO05D002919 3.3e-06 55.1 82 37.8
GSVIVG01036512001 Vitis vinifera HOM05D002721 ORTHO05D002919 3.3e-06 55.1 76 40.8
ECA234G4745 Erigeron canadensis HOM05D002721 ORTHO05D002919 4.4e-06 54.7 65 41.5
Oeu054586.2 Olea europaea HOM05D002721 ORTHO05D002919 4.4e-06 54.7 82 35.4
Sopen05g006410 Solanum pennellii HOM05D002721 ORTHO05D002919 7.4e-06 53.9 82 36.6
Eucgr.G02406 Eucalyptus grandis HOM05D002721 ORTHO05D002919 9.7e-06 53.5 48 54.2


User provided reference genes

Program Settings