Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 5.4e-201 704.1 357 100.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.3e-143 513.5 335 79.1
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.8e-141 505.8 334 77.8
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.8e-141 505.8 331 79.2
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.4e-140 503.4 333 78.4
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.8e-140 503.1 329 77.5
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.4e-140 502.7 314 80.9
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 9.0e-140 500.7 332 76.8
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.2e-139 500.4 330 78.2
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.5e-139 500.0 329 77.8
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.5e-139 498.4 334 77.5
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 5.5e-137 491.5 329 75.7
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.6e-136 490.0 329 76.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.1e-136 489.6 329 76.9
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 2.1e-136 489.6 328 75.3
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 4.6e-136 488.4 329 76.3
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 4.6e-136 488.4 329 75.7
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.0e-136 488.0 329 75.1
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.0e-136 488.0 358 71.5
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 7.9e-136 487.6 357 72.3
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.0e-135 487.3 329 76.0
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.3e-135 486.9 329 76.6
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.8e-135 486.5 328 76.5
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 3.0e-135 485.7 329 75.7
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 5.1e-135 485.0 329 75.4
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.1e-134 483.8 329 75.1
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.9e-134 483.0 330 75.2
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 2.5e-134 482.6 329 74.5
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 5.7e-134 481.5 317 77.3
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 5.7e-134 481.5 311 77.8
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.7e-134 481.5 328 77.1
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.3e-133 480.3 329 73.9
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.1e-133 479.6 329 74.5
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 3.7e-133 478.8 329 73.9
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 4.8e-133 478.4 330 75.8
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.3e-133 478.0 329 74.8
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.4e-132 476.9 329 73.9
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.4e-132 476.9 329 73.9
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.8e-132 476.5 313 77.3
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.8e-132 476.5 329 74.5
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.4e-132 476.1 321 76.0
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.4e-132 476.1 351 72.6
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 3.1e-132 475.7 311 77.5
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 3.1e-132 475.7 329 73.6
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 5.3e-132 474.9 329 73.6
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 6.9e-132 474.6 329 75.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 9.0e-132 474.2 309 77.7
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.5e-131 473.4 329 73.9
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 5.9e-131 471.5 330 74.8
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.7e-130 469.9 307 76.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.9e-130 469.2 331 72.5
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 3.8e-130 468.8 329 72.9
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.1e-129 467.2 313 76.4
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.2e-129 465.7 330 72.1
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 9.3e-129 464.2 311 75.2
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 9.3e-129 464.2 328 72.3
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-128 462.6 331 71.6
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 3.6e-128 462.2 331 71.9
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 4.6e-128 461.8 344 70.6
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 6.1e-128 461.5 329 72.0
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 7.9e-128 461.1 331 71.3
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 7.9e-128 461.1 329 72.0
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 7.9e-128 461.1 329 70.8
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.3e-127 460.3 307 77.5
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.3e-127 460.3 334 71.3
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.9e-127 458.8 338 70.7
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 5.1e-127 458.4 329 71.1
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 6.7e-127 458.0 314 74.5
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 6.7e-127 458.0 335 70.1
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 8.7e-127 457.6 331 71.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 8.7e-127 457.6 329 70.8
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 8.7e-127 457.6 329 70.5
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.1e-126 457.2 331 71.0
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.1e-126 457.2 316 73.7
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.1e-126 457.2 335 70.4
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.5e-126 456.8 319 72.1
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.5e-126 456.8 332 73.2
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.9e-126 456.4 331 71.3
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.5e-126 456.1 339 69.9
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.3e-126 455.7 329 70.8
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 4.3e-126 455.3 329 70.5
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 4.3e-126 455.3 359 68.8
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 7.4e-126 454.5 329 70.5
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 9.7e-126 454.1 332 71.7
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.3e-125 453.8 329 69.9
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.3e-125 453.8 335 69.9
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.3e-125 453.8 313 74.1
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.6e-125 453.4 319 70.2
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.6e-125 453.4 321 74.1
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 2.2e-125 453.0 330 70.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 2.2e-125 453.0 330 71.2
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.7e-125 452.2 332 71.7
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 3.7e-125 452.2 334 70.1
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 3.7e-125 452.2 324 71.3
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.7e-125 452.2 314 74.8
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 4.8e-125 451.8 329 69.9
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.1e-124 450.7 336 71.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.8e-124 449.9 339 69.3
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 3.1e-124 449.1 330 69.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 3.1e-124 449.1 310 71.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 3.1e-124 449.1 291 79.0
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 6.9e-124 448.0 330 69.4
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.2e-123 447.2 313 73.8
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.5e-123 446.8 330 70.3
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.6e-123 446.0 334 68.6
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 3.4e-123 445.7 313 73.2
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 5.9e-123 444.9 343 68.5
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.9e-122 442.6 331 69.2
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.9e-121 439.9 331 68.3
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 7.2e-121 438.0 374 65.0
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.1e-120 436.4 329 69.0
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.4e-119 433.7 324 68.2
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 6.7e-119 431.4 314 69.4
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 8.8e-119 431.0 329 69.3
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.1e-118 430.6 387 61.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-117 426.8 322 68.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.8e-117 425.2 309 70.2
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 4.8e-117 425.2 335 67.5
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 6.3e-117 424.9 310 69.4
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.1e-116 422.5 325 68.6
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 6.9e-116 421.4 306 72.2
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 6.9e-116 421.4 326 67.8
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.0e-115 419.9 327 67.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.0e-115 419.9 521 48.8
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.1e-113 414.1 274 76.6
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.3e-109 400.6 287 74.2
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 2.2e-109 399.8 247 80.6
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 3.7e-109 399.1 329 66.0
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.7e-102 375.2 277 69.7
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.0e-99 366.7 248 75.4
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.7e-98 363.6 332 60.2
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-92 343.6 262 69.5
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 7.0e-92 341.7 262 69.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.2e-91 340.9 242 71.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.5e-91 339.0 206 82.0
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 7.2e-89 331.6 326 53.7
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.2e-88 330.9 329 54.7
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.0e-87 326.2 228 73.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.2e-85 320.1 209 75.6
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 9.5e-81 304.7 216 74.5
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 8.3e-77 291.6 274 55.1
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 5.4e-76 288.9 185 79.5
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-71 273.9 163 83.4
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.6e-67 260.8 186 72.0
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.9e-61 240.0 183 68.3
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 2.4e-60 236.9 365 41.4
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-59 234.2 144 80.6
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.5e-54 217.6 182 65.4
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.9e-52 210.7 144 72.2
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.2e-51 208.0 147 73.5
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 3.9e-50 203.0 273 46.9
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 3.8e-45 186.4 142 69.0
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 3.5e-43 179.9 315 40.0
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 5.8e-38 162.5 146 57.5
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.2e-27 128.3 289 34.9
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.1e-25 121.7 71 85.9
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-25 120.9 94 67.0
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.3e-25 120.2 118 52.5
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 4.8e-24 116.3 211 34.6
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.5e-22 109.8 128 47.7
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 2.5e-20 104.0 340 30.9
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.3e-17 93.6 57 78.9
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 6.3e-16 89.4 56 78.6
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.1e-15 87.0 93 51.6
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 5.1e-10 69.7 62 56.5
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.5e-09 67.4 133 39.1
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.3e-09 67.0 52 63.5
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.8e-08 63.9 46 63.0


User provided reference genes

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