Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 3.1e-153 546.2 587 100.0
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 1.0e-68 265.4 588 75.2
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 6.0e-56 223.0 575 67.3
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 2.3e-55 221.1 519 79.0
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 6.6e-55 219.5 575 66.8
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 3.3e-54 217.2 590 70.2
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 7.3e-54 216.1 491 75.4
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 3.6e-53 213.8 490 80.4
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 1.8e-52 211.5 588 67.5
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 6.8e-52 209.5 586 68.1
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 1.5e-51 208.4 590 72.4
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 1.5e-51 208.4 588 67.9
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 5.8e-51 206.5 586 71.5
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 5.8e-51 206.5 586 71.5
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 1.7e-50 204.9 588 67.3
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 1.4e-49 201.8 571 67.1
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 4.1e-49 200.3 586 66.7
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 2.1e-45 188.0 584 67.3
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 4.7e-45 186.8 493 77.5
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 1.8e-44 184.9 122 73.0
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 4.4e-43 180.3 589 67.1
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 1.4e-41 175.3 577 67.9
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 6.0e-40 169.9 183 49.7
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 3.0e-39 167.5 187 46.5
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 1.1e-38 165.6 188 47.3
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 2.1e-37 161.4 186 45.7
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 2.8e-37 161.0 185 48.1
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.7e-37 160.2 185 47.6
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.7e-37 160.2 185 47.6
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.7e-37 160.2 185 47.6
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 3.1e-36 157.5 185 47.6
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 8.9e-36 156.0 180 48.9
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 3.4e-35 154.1 184 47.3
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 3.4e-35 154.1 188 44.1
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 7.6e-35 152.9 179 48.0
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 7.6e-35 152.9 183 45.9
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 3.8e-34 150.6 183 43.7
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 4.9e-34 150.2 186 46.8
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 3.2e-33 147.5 180 42.8
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 7.1e-33 146.4 179 46.4
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 1.2e-32 145.6 587 64.2
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 1.6e-32 145.2 182 42.3
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 2.1e-32 144.8 191 42.9
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 1.0e-31 142.5 186 45.7
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.3e-31 142.1 182 39.6
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 1.7e-31 141.7 182 41.8
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 5.1e-31 140.2 90 74.4
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 1.1e-30 139.0 182 43.4
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 1.5e-30 138.7 180 43.9
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 1.9e-30 138.3 90 76.7
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 2.5e-30 137.9 90 73.3
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 2.5e-30 137.9 183 41.0
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 3.3e-30 137.5 591 64.8
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 2.8e-29 134.4 183 41.5
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 2.8e-29 134.4 188 42.0
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 8.1e-29 132.9 185 40.0
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 1.4e-28 132.1 178 41.6
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 1.8e-28 131.7 178 41.0
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 3.1e-28 131.0 175 43.4
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 4.0e-28 130.6 178 41.6
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 5.3e-28 130.2 178 40.4
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 5.3e-28 130.2 114 54.4
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.5e-27 128.6 112 53.6
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 2.0e-27 128.3 178 39.3
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 7.6e-27 126.3 182 36.8
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 2.2e-26 124.8 91 67.0
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 2.9e-26 124.4 167 40.1
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 1.1e-25 122.5 174 40.8
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 1.1e-25 122.5 83 65.1
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 1.9e-25 121.7 177 37.9
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 3.2e-25 120.9 81 67.9
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 3.2e-25 120.9 122 52.5
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 4.2e-25 120.6 120 45.0
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 4.2e-25 120.6 88 60.2
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 7.1e-25 119.8 91 62.6
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 9.3e-25 119.4 80 67.5
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 2.1e-24 118.2 89 60.7
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 6.0e-24 116.7 91 60.4
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 7.9e-24 116.3 189 37.0
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 1.0e-23 115.9 93 58.1
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 3.0e-23 114.4 187 36.9
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 3.0e-23 114.4 189 37.6
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 6.7e-23 113.2 187 36.4
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 6.7e-23 113.2 187 36.4
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 6.7e-23 113.2 187 36.4
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 6.7e-23 113.2 187 36.4
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 1.5e-22 112.1 190 37.9
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 1.9e-22 111.7 190 37.9
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 7.4e-22 109.8 84 60.7
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 6.2e-21 106.7 190 36.8
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 8.1e-21 106.3 189 36.0
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 8.1e-21 106.3 189 36.0
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.4e-20 105.5 77 66.2
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 2.6e-19 101.3 183 36.1
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.7e-16 91.3 83 54.2
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 3.0e-15 87.8 65 67.7
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 1.5e-14 85.5 69 55.1
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 2.5e-14 84.7 69 60.9
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 2.4e-12 78.2 63 57.1
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 1.4e-09 68.9 123 37.4
ATR0124G055 Amborella trichopoda HOM05D007347 ORTHO05D009296 3.2e-09 67.8 86 39.5
Migut.M00355 Erythranthe guttata HOM05D005973 ORTHO05D007285 1.0e-07 62.8 53 54.7
Zm00001eb259350 Zea mays HOM05D007347 ORTHO05D009296 1.9e-06 58.5 72 45.8
CARHR283670 Cardamine hirsuta HOM05D007347 ORTHO05D009296 3.3e-06 57.8 36 69.4
Atru.chr3.1557 Acer truncatum HOM05D008684 ORTHO05D010796 5.7e-06 57.0 68 42.6
Atru.chr3.1578 Acer truncatum HOM05D008684 ORTHO05D010796 5.7e-06 57.0 68 42.6


User provided reference genes

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