Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.6e-153 544.7 303 100.0
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 2.3e-67 260.0 135 94.8
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 2.2e-46 190.3 124 85.5
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 2.4e-40 170.2 136 65.4
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.3e-38 164.5 138 63.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 4.9e-38 162.5 135 63.0
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.3e-35 154.5 136 60.3
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 1.3e-35 154.5 138 59.4
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 3.9e-35 152.9 86 89.5
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 5.1e-35 152.5 141 58.2
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 8.7e-35 151.8 136 61.0
Atru.chr1.3017 Acer truncatum HOM05D006427 ORTHO05D008147 1.1e-34 151.4 93 86.0
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.9e-34 150.6 136 60.3
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 3.3e-34 149.8 138 57.2
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.3e-34 149.8 135 55.6
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 7.4e-34 148.7 135 55.6
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 1.6e-33 147.5 75 90.7
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 4.0e-32 142.9 134 58.2
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 5.3e-32 142.5 134 58.2
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 9.0e-32 141.7 136 54.4
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 3.4e-31 139.8 120 56.7
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 3.4e-31 139.8 138 55.1
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.5e-31 139.4 138 56.5
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 7.6e-31 138.7 139 54.7
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 1.0e-30 138.3 134 56.7
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 2.2e-30 137.1 141 54.6
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 4.9e-30 136.0 135 52.6
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 6.5e-30 135.6 128 53.1
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.1e-29 134.8 140 55.0
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.9e-29 134.0 74 87.8
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 1.9e-29 134.0 137 52.6
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.5e-29 133.7 139 49.6
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.5e-29 133.7 139 49.6
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 3.2e-29 133.3 136 50.7
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.2e-29 132.9 132 53.0
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 5.5e-29 132.5 142 55.6
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 5.5e-29 132.5 127 55.1
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 5.5e-29 132.5 147 52.4
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 9.3e-29 131.7 137 51.8
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.2e-28 131.3 137 54.7
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.2e-28 131.3 142 54.9
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.6e-28 131.0 139 50.4
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 2.1e-28 130.6 136 55.9
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 2.1e-28 130.6 134 52.2
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.1e-28 130.6 94 63.8
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 2.7e-28 130.2 140 50.7
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.5e-28 129.8 137 51.1
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 7.9e-28 128.6 138 49.3
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 7.9e-28 128.6 138 49.3
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.8e-27 127.5 137 51.1
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.8e-27 127.5 138 51.4
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 3.0e-27 126.7 137 51.1
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 3.9e-27 126.3 160 45.0
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 3.9e-27 126.3 140 52.1
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 5.1e-27 125.9 138 52.2
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 5.1e-27 125.9 157 49.0
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 6.7e-27 125.6 128 53.1
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 6.7e-27 125.6 141 51.1
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 1.5e-26 124.4 136 47.8
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 2.5e-26 123.6 136 48.5
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 3.3e-26 123.2 136 47.8
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 4.3e-26 122.9 100 59.0
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 7.4e-26 122.1 95 61.1
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 7.4e-26 122.1 102 58.8
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 9.7e-26 121.7 140 48.6
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 9.7e-26 121.7 141 50.4
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 9.7e-26 121.7 136 48.5
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.3e-25 121.3 143 50.3
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 1.3e-25 121.3 105 55.2
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 1.3e-25 121.3 140 48.6
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 6.3e-25 119.0 99 60.6
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 6.3e-25 119.0 138 47.8
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.1e-24 118.2 144 50.0
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.4e-24 117.9 95 61.1
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 1.4e-24 117.9 104 55.8
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 2.4e-24 117.1 135 46.7
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 3.1e-24 116.7 95 60.0
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.1e-24 116.3 76 68.4
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 6.9e-24 115.5 142 49.3
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 2.0e-23 114.0 139 49.6
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 3.4e-23 113.2 130 50.0
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 1.3e-22 111.3 134 47.8
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 2.2e-22 110.5 137 47.4
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 2.9e-22 110.2 113 54.0
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.8e-22 109.8 97 54.6
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 3.8e-22 109.8 104 53.8
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 5.0e-22 109.4 142 48.6
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 5.0e-22 109.4 138 47.1
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 6.5e-22 109.0 81 64.2
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 6.5e-22 109.0 78 65.4
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.1e-21 108.2 138 43.5
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 2.5e-21 107.1 139 45.3
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 2.5e-21 107.1 136 44.9
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 2.5e-21 107.1 136 44.9
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 2.5e-21 107.1 142 45.1
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 4.2e-21 106.3 141 46.1
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 4.2e-21 106.3 139 46.8
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 4.2e-21 106.3 144 46.5
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 7.2e-21 105.5 141 47.5
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 7.2e-21 105.5 141 46.1
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 1.6e-20 104.4 122 50.0
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.6e-20 104.4 101 57.4
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 1.6e-20 104.4 138 47.1
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.1e-20 104.0 122 48.4
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 2.7e-20 103.6 133 44.4
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 2.7e-20 103.6 133 44.4
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 6.1e-20 102.4 136 46.3
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 1.0e-19 101.7 91 54.9
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.4e-19 101.3 104 52.9
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 1.8e-19 100.9 141 48.2
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 2.3e-19 100.5 101 49.5
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 2.3e-19 100.5 136 44.1
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 3.0e-19 100.1 80 52.5
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 1.1e-18 98.2 120 52.5
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 9.7e-18 95.1 85 50.6
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 1.1e-16 91.7 120 50.8
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 6.9e-16 89.0 116 46.6
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 2.5e-13 80.5 90 48.9
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 9.4e-13 78.6 108 41.7
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.7e-12 77.0 125 39.2
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 2.7e-12 77.0 112 42.9
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 3.6e-12 76.6 98 41.8
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.7e-12 76.3 68 51.5
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 1.0e-11 75.1 102 40.2
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 1.0e-11 75.1 82 50.0
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 1.8e-11 74.3 82 47.6
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 7.0e-08 62.4 112 41.1
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 7.7e-07 58.9 75 44.0


User provided reference genes

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