Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1121 Acer truncatum HOM05D002925 ORTHO05D003247 2.5e-194 682.2 417 100.0
Ciclev10000205m.g Citrus clementina HOM05D002925 ORTHO05D003247 7.8e-42 175.6 424 40.6
Duzib116G0838 Durio zibethinus HOM05D002925 ORTHO05D003247 5.6e-32 142.9 276 37.3
COL.COLO4_16382 Corchorus olitorius HOM05D002925 ORTHO05D003247 8.0e-31 139.0 257 40.9
Duzib093G1387 Durio zibethinus HOM05D002925 ORTHO05D003247 1.1e-30 138.7 276 36.6
Gohir.D01G114901 Gossypium hirsutum HOM05D002925 ORTHO05D003247 8.3e-28 129.0 277 36.1
Manes.18G066500 Manihot esculenta HOM05D002925 ORTHO05D003247 1.4e-27 128.3 265 39.6
Gorai.002G140700 Gossypium raimondii HOM05D002925 ORTHO05D003247 2.4e-27 127.5 278 35.3
Haze_22282 Corylus avellana HOM05D002925 ORTHO05D003247 5.6e-24 116.3 190 45.8
Gohir.A01G127000 Gossypium hirsutum HOM05D002925 ORTHO05D003247 5.6e-24 116.3 195 42.6
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 5.2e-22 109.8 202 44.6
Cpa.g.sc53.130 Carica papaya HOM05D002925 ORTHO05D003247 9.9e-21 105.5 177 43.5
Phvul.009G031600 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 3.7e-20 103.6 171 39.2
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 6.4e-20 102.8 187 42.8
Prupe.1G518500 Prunus persica HOM05D002925 ORTHO05D003247 1.1e-19 102.1 274 39.1
VMungo1309G2842 Vigna mungo HOM05D002925 ORTHO05D003247 1.9e-19 101.3 185 38.9
Potri.005G164100 Populus trichocarpa HOM05D002925 ORTHO05D003247 3.2e-19 100.5 425 29.4
Sabra02G0076700 Salix brachista HOM05D002925 ORTHO05D003247 3.2e-19 100.5 217 40.6
TWI56G0820 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 5.4e-19 99.8 263 34.6
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 9.2e-19 99.0 189 40.7
Sp1g19810 Schrenkiella parvula HOM05D002925 ORTHO05D003247 9.2e-19 99.0 239 40.2
AT1G22310 Arabidopsis thaliana HOM05D002925 ORTHO05D003247 6.0e-18 96.3 272 33.5
FvH4_5g37120 Fragaria vesca HOM05D002925 ORTHO05D003247 1.3e-17 95.1 277 34.7
Glyma.04G101200 Glycine max HOM05D002925 ORTHO05D003247 1.3e-17 95.1 180 37.8
Glyma.06G102900 Glycine max HOM05D002925 ORTHO05D003247 1.3e-17 95.1 179 38.5
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 1.3e-17 95.1 210 41.4
FAN18G3145 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.7e-17 94.7 277 34.7
MD08G1184300 Malus domestica HOM05D002925 ORTHO05D003247 3.0e-17 94.0 234 38.0
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 3.9e-17 93.6 191 37.7
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 5.1e-17 93.2 192 37.5
ClCG08G011160 Citrullus lanatus HOM05D002925 ORTHO05D003247 8.6e-17 92.4 210 40.5
RcHm_v2.0_Chr7g0243951 Rosa chinensis HOM05D002925 ORTHO05D003247 8.6e-17 92.4 266 36.8
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.1e-16 92.0 139 45.3
FAN13G2209 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.1e-16 92.0 443 27.3
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 1.1e-16 92.0 192 37.5
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 4.3e-16 90.1 171 41.5
AL1G35760 Arabidopsis lyrata HOM05D002925 ORTHO05D003247 7.3e-16 89.4 269 33.8
Medtr3g074640 Medicago truncatula HOM05D002925 ORTHO05D003247 7.3e-16 89.4 176 37.5
FAN04G0469 Fragaria x ananassa HOM05D002925 ORTHO05D003247 9.5e-16 89.0 275 32.7
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 1.2e-15 88.6 281 34.9
MD00G1009700 Malus domestica HOM05D002925 ORTHO05D003247 3.6e-15 87.0 245 40.0
arahy.Tifrunner.gnm1.ann1.66CWE3 Arachis hypogaea HOM05D002925 ORTHO05D003247 4.7e-15 86.7 174 40.2
Ca_15252_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 4.7e-15 86.7 190 37.4
FAN08G0410 Fragaria x ananassa HOM05D002925 ORTHO05D003247 4.7e-15 86.7 283 32.5
MELO3C011031.2 Cucumis melo HOM05D002925 ORTHO05D003247 6.2e-15 86.3 191 41.4
CsaV3_2G029730 Cucumis sativus L. HOM05D002925 ORTHO05D003247 6.2e-15 86.3 196 40.8
arahy.Tifrunner.gnm1.ann1.8R41I4 Arachis hypogaea HOM05D002925 ORTHO05D003247 1.4e-14 85.1 174 39.7
Sed0026617 Sechium edule HOM05D002925 ORTHO05D003247 1.4e-14 85.1 198 40.4
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.8e-14 84.7 130 46.9
Psat5g138880 Pisum sativum HOM05D002925 ORTHO05D003247 1.8e-14 84.7 239 32.6
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 2.4e-14 84.3 150 43.3
THA.LOC104800147 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 3.1e-14 84.0 310 34.8
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 6.8e-14 82.8 183 36.1
Carub.0001s2186 Capsella rubella HOM05D002925 ORTHO05D003247 8.9e-14 82.4 267 33.3
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 1.2e-13 82.0 215 34.9
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 1.2e-13 82.0 180 39.4
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 1.5e-13 81.6 183 38.3
Thhalv10007200m.g Eutrema salsugineum HOM05D002925 ORTHO05D003247 1.5e-13 81.6 235 34.9
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 2.0e-13 81.3 177 37.9
Aa31LG7G6230 Aethionema arabicum HOM05D002925 ORTHO05D003247 2.6e-13 80.9 255 32.9
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 6.4e-12 76.3 178 37.6
C07p21440 Brassica napus HOM05D002925 ORTHO05D003247 8.4e-12 75.9 172 36.6
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 1.4e-11 75.1 184 35.3
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 1.9e-11 74.7 156 40.4
vmacro21264 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 1.9e-11 74.7 179 35.8
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 3.2e-11 73.9 180 36.7
Lj1g0024313 Lotus japonicus HOM05D002925 ORTHO05D003247 4.1e-11 73.6 231 34.2
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 4.1e-11 73.6 163 36.8
TPR.G26131 Trifolium pratense HOM05D002925 ORTHO05D003247 5.4e-11 73.2 212 33.0
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 7.1e-11 72.8 197 34.5
Oeu024826.1 Olea europaea HOM05D002925 ORTHO05D003247 9.2e-11 72.4 221 32.6
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 1.2e-10 72.0 200 34.0
BolC7t42671H Brassica oleracea HOM05D000298 ORTHO05D003247 2.7e-10 70.9 175 36.6
ECA232G0543 Erigeron canadensis HOM05D002925 ORTHO05D003247 6.0e-10 69.7 292 28.4
Lalb_Chr11g0065401 Lupinus albus HOM05D002925 ORTHO05D003247 6.0e-10 69.7 116 37.9
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 7.8e-10 69.3 196 33.7
Lsat_1_v5_gn_1_3860 Lactuca sativa HOM05D002925 ORTHO05D003247 7.8e-10 69.3 205 33.7
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 7.8e-10 69.3 128 42.2
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 7.8e-10 69.3 228 32.0
BcaB03g14218 Brassica carinata HOM05D002925 ORTHO05D003247 2.3e-09 67.8 170 35.9
PGSC0003DMG400036857 Solanum tuberosum HOM05D002925 ORTHO05D003247 5.1e-09 66.6 172 34.9
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 6.6e-09 66.2 160 35.6
Nn5g30080 Nelumbo nucifera HOM05D002925 ORTHO05D003247 6.6e-09 66.2 166 36.1
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 1.1e-08 65.5 201 30.3
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 1.1e-08 65.5 132 39.4
A07p14550 Brassica napus HOM05D002925 ORTHO05D003247 1.5e-08 65.1 169 36.1
BraA07t29201Z Brassica rapa HOM05D002925 ORTHO05D003247 1.5e-08 65.1 169 36.1
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 1.9e-08 64.7 127 40.9
Dinv44782 Davidia involucrata HOM05D002925 ORTHO05D003247 1.9e-08 64.7 261 31.0
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 1.9e-08 64.7 245 29.8
unitig_8.g5045 Utricularia gibba HOM05D002925 ORTHO05D003247 1.9e-08 64.7 192 34.4
Dinv10478 Davidia involucrata HOM05D011424 ORTHO05D016274 2.5e-08 64.3 108 41.7
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 3.3e-08 63.9 154 34.4
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 4.3e-08 63.5 147 38.1
PSO541G2635 Papaver somniferum HOM05D002925 ORTHO05D003247 9.6e-08 62.4 130 42.3
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 2.8e-07 60.8 113 40.7
Dinv09022 Davidia involucrata HOM05D002925 ORTHO05D003247 6.2e-07 59.7 122 37.7
Sc23g0000240 Simmondsia chinensis HOM05D002925 ORTHO05D003247 6.2e-07 59.7 173 34.1
HanXRQChr02g0043481 Helianthus annuus HOM05D002925 ORTHO05D003247 1.1e-06 58.9 199 31.2
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 1.4e-06 58.5 249 27.3
Sopen02g012230 Solanum pennellii HOM05D002925 ORTHO05D003247 1.8e-06 58.2 173 33.5
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 3.1e-06 57.4 81 45.7
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 6.9e-06 56.2 111 37.8


User provided reference genes

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