Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-95 350.1 166 100.0
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-32 143.7 188 45.2
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-26 123.2 188 38.3
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-24 115.2 167 38.9
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 6.5e-24 114.8 172 38.4
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 6.5e-24 114.8 165 39.4
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 4.2e-23 112.1 166 41.0
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 6.1e-22 108.2 165 40.6
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 7.9e-22 107.8 165 39.4
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 2.3e-21 106.3 165 37.6
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 2.3e-21 106.3 167 37.7
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 2.3e-21 106.3 165 40.0
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 2.3e-21 106.3 165 38.2
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-21 105.9 198 34.8
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 3.0e-21 105.9 165 37.0
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 5.1e-21 105.1 165 35.8
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 5.1e-21 105.1 165 36.4
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 5.1e-21 105.1 165 34.5
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 6.7e-21 104.8 134 43.3
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 8.7e-21 104.4 165 37.6
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 8.7e-21 104.4 167 38.3
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 8.7e-21 104.4 165 38.2
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.5e-20 102.8 165 35.2
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 3.3e-20 102.4 167 36.5
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 3.3e-20 102.4 165 35.2
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-20 101.7 192 32.8
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-20 101.7 179 35.2
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 7.4e-20 101.3 167 35.9
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 1.6e-19 100.1 165 38.2
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 2.2e-19 99.8 173 36.4
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 4.8e-19 98.6 165 37.0
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 4.8e-19 98.6 166 36.7
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 6.3e-19 98.2 165 35.8
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 6.3e-19 98.2 165 37.6
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 6.3e-19 98.2 180 33.9
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 6.3e-19 98.2 130 41.5
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 1.8e-18 96.7 165 35.2
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 2.4e-18 96.3 165 37.6
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 2.4e-18 96.3 165 34.5
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 4.1e-18 95.5 165 36.4
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 6.9e-18 94.7 130 40.0
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 6.9e-18 94.7 165 35.2
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 9.0e-18 94.4 165 37.6
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 9.0e-18 94.4 165 34.5
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 9.0e-18 94.4 165 33.9
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 9.0e-18 94.4 165 33.9
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 1.2e-17 94.0 139 38.1
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 1.5e-17 93.6 173 35.8
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.5e-17 93.6 165 35.2
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.5e-17 93.6 165 35.2
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.0e-17 93.2 165 37.0
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 2.0e-17 93.2 165 33.9
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 2.6e-17 92.8 178 33.7
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 4.5e-17 92.0 184 30.4
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 4.5e-17 92.0 166 32.5
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 5.9e-17 91.7 166 34.3
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 7.7e-17 91.3 166 32.5
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 1.3e-16 90.5 155 34.2
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.7e-16 90.1 176 33.0
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 1.7e-16 90.1 180 32.2
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.2e-16 89.7 165 32.7
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.9e-16 89.4 165 33.3
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 2.9e-16 89.4 165 33.3
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 3.8e-16 89.0 126 38.9
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 5.0e-16 88.6 167 31.7
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 6.5e-16 88.2 166 31.9
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 8.5e-16 87.8 166 33.1
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 1.4e-15 87.0 133 37.6
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.4e-15 87.0 133 37.6
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-15 86.7 184 34.8
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 1.9e-15 86.7 165 33.9
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 3.2e-15 85.9 161 34.2
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 5.5e-15 85.1 174 31.0
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 5.5e-15 85.1 165 35.8
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 7.2e-15 84.7 182 34.6
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 7.2e-15 84.7 135 37.8
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.2e-14 84.0 200 31.0
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 1.6e-14 83.6 172 32.0
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 3.6e-14 82.4 165 30.9
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 6.1e-14 81.6 166 31.9
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 1.8e-13 80.1 165 30.9
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.8e-13 80.1 181 32.0
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 3.9e-13 79.0 167 31.7
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 3.9e-13 79.0 167 31.7
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 6.7e-13 78.2 167 32.3
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 8.8e-13 77.8 126 40.5
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 8.8e-13 77.8 180 30.6
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 8.8e-13 77.8 165 32.7
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-12 77.4 129 41.9
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.0e-12 76.6 181 31.5
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.0e-12 76.6 181 31.5
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 2.5e-12 76.3 129 34.9
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.5e-12 76.3 177 30.5
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.5e-12 76.3 177 30.5
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.5e-12 76.3 177 30.5
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 2.5e-12 76.3 167 30.5
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 4.3e-12 75.5 167 31.1
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 4.3e-12 75.5 167 31.1
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 4.3e-12 75.5 167 31.1
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 7.4e-12 74.7 126 38.1
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 7.4e-12 74.7 121 34.7
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 1.3e-11 73.9 167 29.9
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.7e-11 73.6 167 29.9
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 1.7e-11 73.6 169 29.6
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-11 73.2 170 27.1
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 3.7e-11 72.4 177 29.4
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 3.7e-11 72.4 167 31.7
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 6.3e-11 71.6 171 30.4
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-10 70.5 183 30.6
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 1.8e-10 70.1 167 29.3
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-10 69.7 181 30.9
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 3.1e-10 69.3 135 31.1
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 4.5e-09 65.5 135 30.4
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-08 63.2 144 31.9
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-07 60.5 141 29.8
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 3.2e-07 59.3 124 27.4
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-07 58.9 131 30.5
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 7.2e-07 58.2 63 41.3
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 4.7e-06 55.5 64 40.6


User provided reference genes

Program Settings