Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 8.8e-293 1010.0 691 100.0
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 3.3e-207 725.7 536 73.1
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 9.1e-197 691.0 543 69.8
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 3.8e-195 685.6 543 70.5
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 4.2e-194 682.2 543 69.8
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.5e-191 673.7 543 69.2
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 1.5e-191 673.7 545 68.8
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.2e-190 669.8 543 68.7
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 2.8e-190 669.5 544 68.9
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 7.0e-189 664.8 545 68.8
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 2.0e-188 663.3 545 68.6
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 2.7e-188 662.9 543 68.5
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 2.7e-188 662.9 540 68.0
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 1.3e-187 660.6 546 64.1
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 2.9e-187 659.4 538 65.1
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 6.5e-187 658.3 524 67.9
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 6.5e-187 658.3 543 68.3
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.2e-186 655.6 534 67.8
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 5.5e-186 655.2 534 67.8
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 7.2e-186 654.8 550 64.2
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 7.2e-186 654.8 534 68.4
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 2.1e-185 653.3 534 68.0
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 2.7e-185 652.9 542 66.8
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 4.7e-185 652.1 497 67.8
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 1.8e-184 650.2 534 66.5
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 8.8e-184 647.9 536 67.5
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 2.0e-183 646.7 528 66.1
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.7e-182 643.7 532 65.8
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 2.2e-182 643.3 530 66.4
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 6.3e-182 641.7 542 63.7
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 6.3e-182 641.7 463 70.4
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 6.3e-182 641.7 530 66.2
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 9.1e-181 637.9 526 64.4
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 1.2e-180 637.5 540 68.0
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 2.7e-180 636.3 526 67.3
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 3.5e-180 636.0 532 63.5
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 7.7e-180 634.8 543 63.4
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 7.7e-180 634.8 533 66.2
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 4.2e-178 629.0 459 68.6
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 3.6e-177 625.9 533 65.7
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 8.0e-177 624.8 492 69.1
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 1.0e-176 624.4 520 66.7
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 3.0e-176 622.9 460 68.3
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 6.8e-176 621.7 522 65.1
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 8.9e-176 621.3 518 66.0
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 1.5e-175 620.5 543 63.7
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 2.0e-175 620.2 529 64.3
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 4.4e-175 619.0 535 63.9
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 5.7e-175 618.6 528 63.8
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.3e-174 617.5 528 65.0
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.3e-174 617.5 520 65.2
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 7.0e-173 611.7 536 61.8
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 2.7e-172 609.8 432 70.8
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 4.5e-172 609.0 425 72.0
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 1.0e-171 607.8 527 63.6
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 2.9e-171 606.3 540 62.6
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 5.6e-170 602.1 465 67.5
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.2e-169 600.9 534 63.5
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.6e-169 600.5 411 72.0
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 1.6e-169 600.5 526 62.2
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 2.1e-169 600.1 427 71.2
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 6.1e-169 598.6 498 65.1
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 1.0e-168 597.8 526 61.8
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 2.3e-168 596.7 587 59.3
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 3.0e-168 596.3 542 62.0
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 8.3e-166 588.2 434 68.9
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.2e-164 584.3 460 66.5
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 2.0e-164 583.6 422 69.9
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 2.0e-164 583.6 520 61.9
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 6.0e-164 582.0 492 61.6
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 3.0e-163 579.7 433 67.9
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 3.9e-163 579.3 387 72.9
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 8.6e-163 578.2 545 60.7
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 1.6e-161 573.9 511 64.0
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 4.7e-161 572.4 518 60.0
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 6.2e-161 572.0 536 60.3
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 1.8e-160 570.5 524 59.5
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 2.9e-158 563.1 425 67.3
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 3.7e-158 562.8 490 61.6
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 4.1e-157 559.3 528 57.2
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 1.2e-156 557.8 490 62.0
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 1.7e-155 553.9 423 66.7
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 1.7e-155 553.9 506 62.3
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 1.9e-154 550.4 461 62.0
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 7.3e-154 548.5 424 66.5
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 7.3e-154 548.5 546 57.9
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 7.3e-154 548.5 538 58.0
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 2.1e-153 547.0 534 55.6
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 8.1e-153 545.0 534 59.2
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 2.3e-152 543.5 495 59.0
TAR623G0538 Trochodendron aralioides HOM05D005013 ORTHO05D006005 8.9e-152 541.6 396 69.2
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 1.5e-151 540.8 508 56.3
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 9.9e-151 538.1 463 61.8
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 1.7e-150 537.3 373 70.0
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 2.9e-150 536.6 537 55.1
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 3.7e-150 536.2 450 62.4
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 1.9e-149 533.9 433 63.5
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 2.1e-148 530.4 478 60.7
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 1.8e-144 517.3 422 64.0
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.8e-144 517.3 525 56.4
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 3.1e-144 516.5 538 54.3
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 3.1e-144 516.5 460 60.2
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 4.9e-142 509.2 533 58.2
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 1.9e-141 507.3 454 60.1
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 2.9e-134 483.4 541 51.4
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 6.0e-132 475.7 456 56.6
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 2.1e-129 467.2 487 52.6
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 1.8e-128 464.2 394 66.5
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 7.1e-125 452.2 381 62.2
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 7.1e-125 452.2 427 57.4
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 1.2e-119 434.9 396 56.3
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 2.6e-111 407.1 361 67.0
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 2.6e-111 407.1 330 62.7
BcaNung02135 Brassica carinata HOM05D005013 ORTHO05D006005 3.9e-107 393.3 348 58.6
Mapoly0123s0029 Marchantia polymorpha HOM05D005013 ORTHO05D006005 8.7e-107 392.1 367 54.2
Actinidia21716 Actinidia chinensis HOM05D005013 ORTHO05D006005 8.2e-105 385.6 353 59.5
SMO116G0383 Selaginella moellendorffii HOM05D005013 ORTHO05D006005 3.1e-104 383.6 360 56.1
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 4.5e-103 379.8 352 56.2
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 1.8e-99 367.9 423 48.2
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 2.3e-91 340.9 360 52.8
SHI11095 Sapria himalayana HOM05D005013 ORTHO05D006005 3.0e-91 340.5 390 49.5
AL2G41840 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 5.0e-86 323.2 215 74.0
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 8.0e-84 315.8 317 60.9
CBR_g8033 Chara braunii HOM05D005013 ORTHO05D006005 1.9e-77 294.7 373 45.6
Cpa.g.sc109.3 Carica papaya HOM05D005013 ORTHO05D006005 2.1e-76 291.2 211 69.7
Cpa.g.sc109.1 Carica papaya HOM05D005013 ORTHO05D006005 6.3e-73 279.6 281 62.6
CDE06G0689 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 2.2e-70 271.2 364 44.5
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 2.5e-69 267.7 509 40.1
BraA10t45345Z Brassica rapa HOM05D005013 ORTHO05D006005 1.8e-67 261.5 175 73.1
HPP92_015185 Vanilla planifolia HOM05D005013 ORTHO05D006005 3.5e-47 194.1 198 52.5
Lj5C53T3 Lonicera japonica HOM05D005013 ORTHO05D006005 5.0e-46 190.3 204 48.5
Migut.I00890 Erythranthe guttata HOM05D005013 ORTHO05D006005 5.8e-42 176.8 506 28.9
Oeu023599.1 Olea europaea HOM05D005013 ORTHO05D006005 3.2e-40 171.0 170 52.4
CARHR074670 Cardamine hirsuta HOM05D005013 ORTHO05D006005 7.5e-34 149.8 96 71.9
Psat4g155920 Pisum sativum HOM05D001854 ORTHO05D001800 1.1e-27 129.4 110 59.1
Psat4g155880 Pisum sativum HOM05D001854 ORTHO05D001800 2.4e-27 128.3 110 59.1
Lsat_1_v5_gn_6_46660 Lactuca sativa HOM05D005013 ORTHO05D006005 3.1e-27 127.9 95 69.5
Nn2g13410 Nelumbo nucifera HOM05D005013 ORTHO05D006005 2.0e-26 125.2 121 61.2
MCO01G084 Micromonas commoda HOM05D005013 ORTHO05D006005 7.8e-23 113.2 356 26.1
Cre12.g520250 Chlamydomonas reinhardtii HOM05D005013 ORTHO05D006005 5.1e-22 110.5 234 32.5
CAN.G907.1 Capsicum annuum HOM05D005013 ORTHO05D006005 3.3e-21 107.8 89 60.7
TAR560G0009 Trochodendron aralioides HOM05D005013 ORTHO05D006005 2.1e-15 88.6 140 52.9
Oeu023601.1 Olea europaea HOM05D005013 ORTHO05D006005 1.3e-14 85.9 145 38.6
CBR_g48652 Chara braunii HOM05D005013 ORTHO05D006005 6.6e-14 83.6 163 37.4
vmacro04324 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 7.3e-13 80.1 123 39.0
Lsat_1_v5_gn_1_14160 Lactuca sativa HOM05D005013 ORTHO05D006005 2.8e-12 78.2 106 47.2
Oeu026780.1 Olea europaea HOM05D005013 ORTHO05D006005 6.2e-12 77.0 62 59.7
AL2G25330 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 1.1e-11 76.3 141 39.0
Lsat_1_v5_gn_5_133740 Lactuca sativa HOM05D000912 ORTHO05D021086 2.4e-08 65.1 43 76.7
CAN.G1143.9 Capsicum annuum HOM05D000602 ORTHO05D001147 3.2e-08 64.7 121 37.2
CAN.G1143.11 Capsicum annuum HOM05D005013 ORTHO05D115532 9.3e-08 63.2 44 63.6
SEGI_39677 Sequoiadendron giganteum HOM05D050634 ORTHO05D006005 3.0e-06 58.2 111 35.1


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