Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 4.9e-115 417.9 230 100.0
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.7e-78 296.6 228 68.0
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.4e-77 293.5 228 67.1
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 4.1e-77 292.0 232 65.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 4.5e-76 288.5 230 64.3
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 2.9e-75 285.8 230 65.2
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.1e-74 283.9 232 64.7
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 4.2e-74 282.0 233 66.1
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 2.1e-73 279.6 233 64.4
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 4.7e-73 278.5 232 63.8
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 4.7e-73 278.5 233 64.4
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.0e-72 277.3 231 65.8
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.0e-72 277.3 231 65.8
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.0e-72 277.3 228 65.4
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 8.8e-72 274.2 229 61.6
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 2.6e-71 272.7 230 63.0
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 9.8e-71 270.8 212 68.4
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.3e-70 270.4 229 62.0
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 2.2e-70 269.6 230 62.2
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 3.7e-70 268.9 230 61.7
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 3.7e-70 268.9 245 59.6
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 1.4e-69 266.9 234 65.8
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 4.1e-69 265.4 230 62.2
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 5.4e-69 265.0 232 64.7
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 7.0e-69 264.6 233 70.4
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.6e-68 263.5 231 65.4
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 5.9e-68 261.5 230 68.7
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 6.6e-67 258.1 236 60.6
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 1.1e-66 257.3 241 64.7
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 1.5e-66 256.9 239 65.3
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 2.5e-66 256.1 230 59.1
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 2.5e-66 256.1 230 61.3
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 4.2e-66 255.4 214 68.7
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.6e-65 253.4 256 60.5
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 2.1e-65 253.1 234 62.0
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.8e-65 252.7 225 59.1
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 3.6e-65 252.3 232 55.2
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.8e-64 250.0 232 59.9
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 2.3e-64 249.6 230 62.6
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 3.0e-64 249.2 232 54.7
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 4.0e-64 248.8 247 55.1
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 5.2e-64 248.4 238 62.2
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 5.2e-64 248.4 230 57.8
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 8.9e-64 247.7 230 63.9
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 1.2e-63 247.3 230 57.4
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 2.0e-63 246.5 240 55.4
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.8e-62 242.7 234 56.8
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 6.3e-62 241.5 232 53.9
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 4.1e-61 238.8 219 62.1
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 4.1e-61 238.8 234 56.0
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 5.4e-61 238.4 227 53.7
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 7.0e-61 238.0 234 62.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 2.0e-60 236.5 231 55.4
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.7e-60 236.1 235 62.6
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 3.5e-60 235.7 233 52.8
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 4.5e-60 235.3 156 75.0
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 5.9e-60 235.0 230 62.6
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 2.9e-59 232.6 236 51.7
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 3.9e-59 232.3 232 55.6
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 1.1e-58 230.7 233 55.8
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 1.9e-58 229.9 240 52.9
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 4.3e-58 228.8 241 53.9
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 4.3e-58 228.8 215 60.9
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 7.3e-58 228.0 234 54.3
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 1.2e-57 227.3 234 54.7
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.8e-57 226.1 233 56.2
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 3.6e-57 225.7 230 53.9
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 3.6e-57 225.7 230 52.6
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 4.7e-57 225.3 185 64.3
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 4.7e-57 225.3 152 73.0
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 6.1e-57 224.9 229 54.1
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 8.0e-57 224.6 230 52.2
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.0e-56 224.2 239 56.9
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.0e-56 224.2 223 55.6
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 1.4e-56 223.8 226 52.7
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.3e-56 223.0 243 53.1
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 5.2e-56 221.9 244 52.9
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 5.2e-56 221.9 243 53.1
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 8.9e-56 221.1 242 53.3
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.2e-55 220.7 240 52.9
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.0e-55 219.9 249 51.8
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.0e-55 219.9 233 59.2
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 9.8e-55 217.6 215 61.4
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.3e-54 217.2 233 54.1
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 2.9e-54 216.1 236 52.5
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 2.9e-54 216.1 234 57.7
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 3.7e-54 215.7 236 52.5
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.4e-54 214.9 230 51.7
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 1.1e-53 214.2 233 54.5
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 1.1e-53 214.2 245 50.2
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 1.4e-53 213.8 217 59.9
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.9e-53 213.4 212 55.2
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.2e-53 212.6 211 55.0
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 4.1e-53 212.2 232 52.6
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 4.1e-53 212.2 205 62.4
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 5.4e-53 211.8 187 56.7
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 5.4e-53 211.8 231 55.8
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 9.2e-53 211.1 233 53.2
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 9.2e-53 211.1 233 53.2
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 9.2e-53 211.1 229 50.2
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.0e-52 209.9 212 54.7
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 4.6e-52 208.8 243 46.5
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 6.0e-52 208.4 230 52.2
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 1.0e-51 207.6 151 67.5
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 1.7e-51 206.8 243 51.0
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 3.0e-51 206.1 234 49.6
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 1.9e-50 203.4 228 50.0
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 3.3e-50 202.6 233 52.4
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 3.3e-50 202.6 232 47.4
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 5.6e-50 201.8 222 49.1
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 5.6e-50 201.8 199 52.8
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 9.5e-50 201.1 132 75.0
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 2.8e-49 199.5 232 52.2
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 1.4e-48 197.2 206 59.7
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 1.8e-48 196.8 236 49.6
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 1.8e-48 196.8 215 54.0
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 1.8e-48 196.8 231 48.9
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 8.9e-48 194.5 235 50.2
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 2.0e-47 193.4 235 50.2
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 3.4e-47 192.6 230 49.1
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.4e-47 192.6 230 47.4
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 4.4e-47 192.2 235 48.9
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 1.7e-46 190.3 152 61.8
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 2.9e-46 189.5 230 48.7
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 3.7e-46 189.1 239 48.5
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 3.2e-45 186.0 231 47.6
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 5.4e-45 185.3 214 56.1
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 2.7e-44 183.0 145 61.4
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 2.3e-43 179.9 185 50.3
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 3.0e-43 179.5 142 64.1
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 1.1e-42 177.6 165 55.8
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 9.5e-42 174.5 237 42.2
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.1e-40 171.0 232 45.7
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 8.9e-40 167.9 233 44.2
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 1.3e-38 164.1 247 44.9
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-38 162.9 142 59.2
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 3.3e-34 149.4 128 58.6
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 1.4e-32 144.1 180 52.8
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 2.4e-32 143.3 239 39.3
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 2.6e-31 139.8 214 43.0
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 1.3e-25 120.9 228 34.6
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 9.0e-24 114.8 72 76.4
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 1.4e-21 107.5 175 44.0
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 1.3e-19 100.9 132 48.5
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 5.1e-19 99.0 62 72.6
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 2.1e-17 93.6 55 74.5
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 4.0e-16 89.4 142 40.8
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 2.0e-15 87.0 54 74.1
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 7.6e-15 85.1 54 70.4
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 3.8e-14 82.8 94 50.0
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 3.3e-10 69.7 152 34.2
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 3.7e-09 66.2 44 68.2
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.8e-08 63.9 51 54.9
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.9e-08 62.0 68 52.9
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 1.5e-07 60.8 73 41.1
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 2.6e-07 60.1 44 63.6
MCO03G325 Micromonas commoda HOM05D004719 ORTHO05D005519 3.8e-06 56.2 159 32.7


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