Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy84s004 Aquilegia oxysepala HOM05D004194 ORTHO05D077318 3.8e-131 471.5 231 100.0
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 5.6e-34 148.7 271 33.6
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 2.0e-31 140.2 290 31.7
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 1.7e-30 137.1 290 31.0
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 4.9e-30 135.6 290 32.1
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 6.4e-30 135.2 290 31.4
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 1.1e-29 134.4 290 31.4
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 1.9e-29 133.7 290 31.7
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 1.9e-29 133.7 290 30.7
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 2.4e-29 133.3 290 30.3
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 2.4e-29 133.3 290 31.0
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 3.2e-29 132.9 290 30.7
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 3.2e-29 132.9 290 30.7
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 3.2e-29 132.9 290 30.7
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 3.2e-29 132.9 290 31.4
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 4.2e-29 132.5 293 30.7
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 4.2e-29 132.5 290 31.4
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 4.2e-29 132.5 290 31.0
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 4.2e-29 132.5 290 31.0
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 5.4e-29 132.1 290 31.7
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 5.4e-29 132.1 290 31.7
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 5.4e-29 132.1 290 30.3
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 5.4e-29 132.1 290 30.7
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 7.1e-29 131.7 293 29.7
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 7.1e-29 131.7 293 29.7
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 7.1e-29 131.7 290 31.7
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 7.1e-29 131.7 290 30.7
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 7.1e-29 131.7 290 31.0
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 9.3e-29 131.3 293 30.0
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 9.3e-29 131.3 290 31.0
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 9.3e-29 131.3 290 31.4
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 1.2e-28 131.0 290 31.4
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 1.6e-28 130.6 293 29.4
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 1.6e-28 130.6 293 29.7
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 1.6e-28 130.6 293 29.7
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 2.1e-28 130.2 293 29.7
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 30.7
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 31.0
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 30.3
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 31.0
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 30.7
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 30.7
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 30.7
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 2.1e-28 130.2 290 31.0
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 2.7e-28 129.8 290 31.0
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 2.7e-28 129.8 290 30.7
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 2.7e-28 129.8 290 31.0
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 2.7e-28 129.8 290 31.0
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 2.7e-28 129.8 290 30.7
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 3.5e-28 129.4 293 29.7
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 3.5e-28 129.4 290 29.7
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 3.5e-28 129.4 290 29.7
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 4.6e-28 129.0 290 30.7
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 4.6e-28 129.0 293 30.7
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 4.6e-28 129.0 293 30.7
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 4.6e-28 129.0 293 29.7
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 4.6e-28 129.0 290 30.7
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 6.0e-28 128.6 290 31.0
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 6.0e-28 128.6 290 30.7
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 6.0e-28 128.6 290 29.7
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 7.9e-28 128.3 294 30.6
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 7.9e-28 128.3 290 31.0
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 1.3e-27 127.5 290 30.0
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 1.3e-27 127.5 290 31.4
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 1.3e-27 127.5 290 31.0
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 1.3e-27 127.5 290 30.7
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 1.8e-27 127.1 290 30.7
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 1.8e-27 127.1 290 30.0
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.8e-27 127.1 290 30.3
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 1.8e-27 127.1 290 31.0
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 2.3e-27 126.7 290 29.7
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 2.3e-27 126.7 290 30.3
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 2.3e-27 126.7 290 30.7
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 3.0e-27 126.3 290 29.3
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 3.0e-27 126.3 290 29.3
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 3.9e-27 125.9 290 29.3
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 3.9e-27 125.9 290 30.0
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 3.9e-27 125.9 290 31.0
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 5.1e-27 125.6 290 30.0
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 5.1e-27 125.6 290 30.0
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 5.1e-27 125.6 290 29.3
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 6.7e-27 125.2 290 29.7
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 8.7e-27 124.8 290 29.0
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 1.5e-26 124.0 290 29.7
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 1.5e-26 124.0 290 30.3
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 1.9e-26 123.6 290 29.7
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 2.5e-26 123.2 264 30.3
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 2.5e-26 123.2 290 30.3
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 3.3e-26 122.9 290 30.0
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 4.3e-26 122.5 290 28.3
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 5.6e-26 122.1 290 30.0
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 1.3e-25 120.9 290 30.3
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 1.6e-25 120.6 290 28.6
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 2.1e-25 120.2 297 29.3
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 2.8e-25 119.8 297 29.3
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 2.8e-25 119.8 290 29.7
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 3.7e-25 119.4 311 28.3
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 4.8e-25 119.0 305 29.2
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 1.4e-24 117.5 290 29.0
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 2.4e-24 116.7 282 29.1
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 2.4e-24 116.7 272 29.4
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 4.0e-24 115.9 143 44.1
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 6.9e-24 115.2 143 44.1
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 9.0e-24 114.8 143 44.1
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 9.0e-24 114.8 143 44.1
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 9.0e-24 114.8 143 44.1
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 9.0e-24 114.8 143 43.4
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 1.2e-23 114.4 143 44.8
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 1.5e-23 114.0 308 28.9
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.5e-23 114.0 143 44.1
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 2.0e-23 113.6 143 44.1
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 3.4e-23 112.8 323 27.9
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 4.5e-23 112.5 254 29.9
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 4.5e-23 112.5 254 29.9
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 4.5e-23 112.5 143 44.1
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 4.5e-23 112.5 143 44.1
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 5.8e-23 112.1 143 43.4
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 7.6e-23 111.7 143 43.4
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 9.9e-23 111.3 143 44.1
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 2.2e-22 110.2 290 27.6
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 2.9e-22 109.8 268 28.7
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 3.8e-22 109.4 143 42.0
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 1.4e-21 107.5 340 27.1
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 1.9e-21 107.1 238 30.3
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 2.5e-21 106.7 290 27.2
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 5.5e-21 105.5 149 41.6
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 9.3e-21 104.8 90 54.4
HPP92_001149 Vanilla planifolia HOM05D004194 ORTHO05D005641 4.6e-20 102.4 93 51.6
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 6.0e-20 102.1 163 38.0
C02p04750 Brassica napus HOM05D004194 ORTHO05D005641 1.9e-18 97.1 95 47.4
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 5.6e-18 95.5 220 30.9
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 1.3e-17 94.4 181 34.8
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 1.6e-17 94.0 266 27.4
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 1.4e-16 90.9 291 26.5
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 1.8e-16 90.5 143 39.2
Lj4C718T1 Lonicera japonica HOM05D004194 ORTHO05D005641 1.2e-15 87.8 93 48.4
BcaB01g03715 Brassica carinata HOM05D004194 ORTHO05D005641 3.8e-14 82.8 172 30.2
Oeu028023.1 Olea europaea HOM05D004194 ORTHO05D033851 3.8e-14 82.8 68 54.4
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.8e-14 82.8 136 36.8
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 3.0e-11 73.2 255 26.7
BraA02t05060Z Brassica rapa HOM05D004194 ORTHO05D033851 1.9e-10 70.5 70 47.1
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 3.1e-08 63.2 217 26.3
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 5.3e-08 62.4 116 35.3
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 8.5e-06 55.1 77 31.2


User provided reference genes

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