Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.8e-111 405.2 191 100.0
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 7.6e-77 290.8 190 74.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 3.5e-74 282.0 189 72.5
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.0e-73 280.4 190 69.5
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 3.0e-73 278.9 193 70.5
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 2.5e-72 275.8 191 68.6
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.8e-71 272.3 191 68.1
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 3.6e-71 271.9 189 67.2
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.8e-71 271.6 192 68.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 8.1e-71 270.8 185 69.7
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.1e-70 270.4 190 68.9
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.1e-70 270.4 192 66.7
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 4.0e-70 268.5 190 66.8
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.0e-70 268.5 192 68.2
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.0e-70 268.5 192 68.2
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.2e-69 266.9 192 66.1
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.5e-69 266.5 191 66.5
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.6e-69 265.8 186 64.5
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 2.6e-69 265.8 189 68.3
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.8e-69 264.6 191 67.5
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 9.9e-69 263.8 190 67.4
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 9.9e-69 263.8 191 67.5
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.3e-68 263.5 190 65.8
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.3e-68 263.5 187 68.4
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.3e-68 263.5 190 67.9
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.7e-68 263.1 187 69.0
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.7e-68 263.1 186 64.5
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.2e-68 262.7 191 65.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 2.2e-68 262.7 192 66.1
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 3.8e-68 261.9 190 66.3
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 4.9e-68 261.5 187 68.4
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 4.9e-68 261.5 192 63.5
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 8.4e-68 260.8 190 65.8
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.4e-67 260.0 191 64.9
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.4e-67 260.0 192 65.6
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.9e-67 259.6 188 68.6
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.9e-67 259.6 190 64.7
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 3.2e-67 258.8 190 65.3
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 5.4e-67 258.1 190 64.7
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 5.4e-67 258.1 190 64.7
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 7.1e-67 257.7 190 64.7
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 7.1e-67 257.7 190 64.2
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 7.1e-67 257.7 190 65.3
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 7.1e-67 257.7 192 63.5
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 9.3e-67 257.3 191 65.4
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 9.3e-67 257.3 191 65.4
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.2e-66 256.9 192 65.6
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-66 256.9 192 65.1
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.6e-66 256.5 193 64.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 2.1e-66 256.1 191 64.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.1e-66 256.1 192 65.6
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 2.1e-66 256.1 190 65.3
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 2.1e-66 256.1 192 63.5
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 2.7e-66 255.8 191 65.4
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 4.6e-66 255.0 192 65.1
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.3e-65 253.4 180 67.8
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.3e-65 253.4 191 64.9
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.3e-65 252.7 190 64.2
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.3e-65 252.7 192 63.5
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.9e-65 251.9 186 65.6
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 3.9e-65 251.9 192 64.6
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 5.1e-65 251.5 191 63.4
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 5.1e-65 251.5 193 64.8
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 8.7e-65 250.8 192 63.0
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 8.7e-65 250.8 206 62.1
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 8.7e-65 250.8 194 63.9
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.1e-64 250.4 190 65.3
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.5e-64 250.0 192 62.0
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.5e-64 250.0 192 63.0
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.9e-64 249.6 192 62.0
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.9e-64 249.6 191 61.3
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.9e-64 249.6 192 65.1
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.5e-64 249.2 188 62.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 2.5e-64 249.2 192 62.0
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.5e-64 249.2 186 65.6
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 2.5e-64 249.2 190 63.7
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 3.3e-64 248.8 192 65.1
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.3e-64 248.8 191 62.8
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 4.3e-64 248.4 192 61.5
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 4.3e-64 248.4 192 61.5
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 7.4e-64 247.7 192 60.9
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 7.4e-64 247.7 192 62.5
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 9.6e-64 247.3 190 64.7
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.1e-63 246.1 190 64.7
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 8.1e-63 244.2 190 62.6
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.8e-62 243.0 190 62.6
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.8e-62 243.0 190 62.6
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 2.4e-62 242.7 189 63.0
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 5.3e-62 241.5 185 61.6
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.2e-61 240.4 190 61.6
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.6e-61 239.2 184 59.8
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.5e-61 238.4 185 60.5
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.2e-60 236.1 189 60.3
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 2.2e-60 236.1 190 61.6
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.2e-60 236.1 190 61.6
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.2e-60 236.1 190 61.6
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 6.4e-60 234.6 230 53.5
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.7e-58 229.2 185 60.0
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.6e-58 228.4 189 59.8
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 6.0e-58 228.0 192 57.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.8e-57 226.5 192 57.8
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.9e-57 225.3 189 57.7
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.3e-56 222.2 221 52.9
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 5.6e-56 221.5 188 56.4
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.6e-55 219.9 188 55.9
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 2.8e-55 219.2 186 54.8
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 3.7e-55 218.8 183 55.7
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.4e-54 216.9 185 54.6
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.8e-54 216.5 188 55.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 2.4e-54 216.1 192 56.8
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 9.0e-54 214.2 192 56.2
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.2e-53 213.8 192 56.8
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.9e-52 209.1 189 55.0
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-51 206.5 148 66.2
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.2e-51 205.3 186 56.5
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 3.0e-49 199.1 150 64.7
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 6.7e-49 198.0 191 53.4
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.3e-47 191.4 186 53.8
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.3e-39 164.9 135 60.0
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.8e-31 139.4 103 68.0
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 9.1e-30 134.4 83 71.1
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.0e-28 131.0 81 72.8
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.8e-25 117.9 105 53.3
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 3.3e-24 115.9 115 53.9
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.0e-21 106.7 103 51.5
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.0e-13 80.1 96 44.8
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 8.0e-10 68.2 203 27.1
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 9.1e-06 54.7 77 40.3


User provided reference genes

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