Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03986 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 0.0e+00 1098.6 548 100.0
Aqoxy7G01063 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 3.7e-84 316.6 312 56.7
Aqoxy7G03991 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 1.3e-36 158.7 478 26.8
Aqoxy7G01064 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 8.7e-17 92.8 95 48.4
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.5e-16 92.0 268 26.9
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 4.9e-12 77.0 108 38.0
CDE05G1217 Ceratophyllum demersum HOM05D000249 ORTHO05D000206 8.4e-12 76.3 310 24.2
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 1.9e-11 75.1 197 28.4
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 1.9e-11 75.1 140 28.6
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 9.3e-11 72.8 246 25.2
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.7e-10 71.2 110 36.4
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 3.5e-10 70.9 135 28.9
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 4.6e-10 70.5 95 33.7
Hma1.2p1_0375F.1_g138740 Hydrangea macrophylla HOM05D000249 ORTHO05D000206 4.6e-10 70.5 88 35.2
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 6.0e-10 70.1 198 26.3
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 6.0e-10 70.1 114 33.3
Sopen04g023200 Solanum pennellii HOM05D000249 ORTHO05D000206 6.0e-10 70.1 114 34.2
Solyc04g051870.3 Solanum lycopersicum HOM05D000249 ORTHO05D000206 7.9e-10 69.7 114 34.2
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 1.0e-09 69.3 114 33.3
Thhalv10025408m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.3e-09 68.2 112 33.0
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.0e-09 67.8 178 28.7
CANSAT11G2049 Cannabis sativa HOM05D000249 ORTHO05D000206 3.9e-09 67.4 246 23.2
Aqoxy6G00478 Aquilegia oxysepala HOM05D000249 ORTHO05D000206 5.1e-09 67.0 137 30.7
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.1e-09 67.0 203 29.6
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 6.7e-09 66.6 263 22.8
PSO675G5947 Papaver somniferum HOM05D000249 ORTHO05D000206 1.1e-08 65.9 87 34.5
A08p14570 Brassica napus HOM05D000249 ORTHO05D000206 1.9e-08 65.1 268 23.9
BraA08t33443Z Brassica rapa HOM05D000249 ORTHO05D000206 1.9e-08 65.1 268 23.9
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.5e-08 64.7 90 35.6
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 7.4e-08 63.2 92 34.8
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 7.4e-08 63.2 92 34.8
C01p13300 Brassica napus HOM05D000249 ORTHO05D000206 9.6e-08 62.8 83 39.8
C07p63080 Brassica napus HOM05D000249 ORTHO05D000206 9.6e-08 62.8 103 30.1
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 9.6e-08 62.8 192 27.6
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 9.6e-08 62.8 92 34.8
AL7G50760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-07 62.4 113 32.7
BcaB07g30006 Brassica carinata HOM05D000956 ORTHO05D003111 1.6e-07 62.0 87 35.6
A01p11300 Brassica napus HOM05D000249 ORTHO05D000206 2.8e-07 61.2 115 32.2
BraA01t01074Z Brassica rapa HOM05D000249 ORTHO05D000206 2.8e-07 61.2 115 32.2
BcaC06g30820 Brassica carinata HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 34.5
A06p39330 Brassica napus HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 34.5
C02p56320 Brassica napus HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 35.6
C07p38940 Brassica napus HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 34.5
BolC2t11690H Brassica oleracea HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 35.6
BolC7t44414H Brassica oleracea HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 34.5
BraA06t26848Z Brassica rapa HOM05D000956 ORTHO05D003111 3.7e-07 60.8 87 34.5
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 4.8e-07 60.5 104 33.7
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 4.8e-07 60.5 94 33.0
AT4G19865 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 6.2e-07 60.1 118 28.8
BcaC03g17635 Brassica carinata HOM05D000956 ORTHO05D003111 6.2e-07 60.1 87 35.6
A01p03420 Brassica napus HOM05D000249 ORTHO05D000206 6.2e-07 60.1 136 29.4
Manes.13G061500 Manihot esculenta HOM05D000956 ORTHO05D003111 6.2e-07 60.1 151 28.5
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 6.2e-07 60.1 115 29.6
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.2e-07 60.1 117 32.5
CARHR246960 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.1e-07 59.7 88 38.6
BolC1t04757H Brassica oleracea HOM05D000956 ORTHO05D003111 1.1e-06 59.3 103 32.0
CSS0032867 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 1.1e-06 59.3 100 31.0
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-06 59.3 88 31.8
A01p11270 Brassica napus HOM05D000249 ORTHO05D000206 1.4e-06 58.9 83 37.3
BraA01t01072Z Brassica rapa HOM05D000249 ORTHO05D000206 1.4e-06 58.9 83 37.3
CARHR095200 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.4e-06 58.9 136 27.9
Ah.01g013910 Amaranthus hybridus HOM05D000956 ORTHO05D003111 1.8e-06 58.5 131 26.7
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.8e-06 58.5 115 34.8
AL7G34820 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-06 58.2 97 36.1
BraA01t00329Z Brassica rapa HOM05D000249 ORTHO05D000206 2.4e-06 58.2 139 28.1
Thhalv10005635m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.1e-06 57.8 90 34.4
PSO541G4415 Papaver somniferum HOM05D000249 ORTHO05D000206 3.1e-06 57.8 84 32.1
PSO675G8073 Papaver somniferum HOM05D000249 ORTHO05D000206 3.1e-06 57.8 92 32.6
A01p37830 Brassica napus HOM05D000956 ORTHO05D003111 4.0e-06 57.4 103 31.1
C01p47910 Brassica napus HOM05D000956 ORTHO05D003111 4.0e-06 57.4 103 31.1
BraA01t03844Z Brassica rapa HOM05D000956 ORTHO05D003111 4.0e-06 57.4 103 31.1
CSS0003503 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 4.0e-06 57.4 175 25.7
CARHR091610 Cardamine hirsuta HOM05D000956 ORTHO05D003111 4.0e-06 57.4 104 27.9
Thhalv10006011m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.0e-06 57.4 112 28.6
Carub.0008s0622 Capsella rubella HOM05D000249 ORTHO05D000206 5.3e-06 57.0 95 33.7
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 5.3e-06 57.0 106 31.1
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 5.3e-06 57.0 94 31.9
AL1G62740 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 6.9e-06 56.6 90 32.2
Carub.0003s1614 Capsella rubella HOM05D000956 ORTHO05D003111 6.9e-06 56.6 90 31.1
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 6.9e-06 56.6 92 31.5


User provided reference genes

Program Settings