Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 0.0e+00 1928.3 967 100.0
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 3.3e-301 1038.5 922 60.3
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 1.0e-294 1016.9 970 57.8
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 2.0e-290 1002.7 952 57.6
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 3.9e-278 961.8 965 56.5
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 2.0e-274 949.5 960 56.4
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 1.2e-271 940.3 961 56.1
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 6.0e-271 937.9 941 56.7
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 7.6e-266 921.0 963 54.6
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.1e-264 917.1 964 53.8
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 2.4e-264 916.0 967 53.7
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 3.2e-264 915.6 950 54.2
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 7.1e-264 914.4 957 56.4
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 1.2e-263 913.7 963 53.5
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 5.6e-261 904.8 954 52.8
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.1e-259 900.6 961 53.5
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.4e-259 899.4 976 53.0
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 3.1e-259 899.0 922 56.3
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 9.0e-259 897.5 954 52.3
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 9.0e-259 897.5 954 53.8
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 3.4e-258 895.6 976 52.9
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 4.4e-258 895.2 967 53.3
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 7.6e-258 894.4 975 52.7
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 9.3e-256 887.5 965 52.7
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.6e-255 886.7 976 52.5
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 2.1e-255 886.3 959 52.6
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 3.5e-255 885.6 970 53.7
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 3.5e-255 885.6 954 51.8
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 5.1e-254 881.7 954 51.8
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 2.5e-253 879.4 961 52.2
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 7.3e-253 877.9 958 51.7
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 4.8e-252 875.2 978 52.6
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 8.1e-252 874.4 965 52.1
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.4e-251 873.6 963 52.6
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 1.8e-251 873.2 958 52.8
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 4.0e-251 872.1 965 52.6
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 1.2e-250 870.5 967 51.1
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 4.5e-250 868.6 936 53.0
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 7.6e-250 867.8 979 51.4
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 7.6e-250 867.8 966 52.5
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 2.2e-249 866.3 998 50.8
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 8.4e-249 864.4 1000 49.9
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 1.4e-248 863.6 1005 50.7
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 1.4e-248 863.6 961 51.6
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 4.2e-248 862.1 946 51.2
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 2.1e-247 859.8 911 52.7
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 3.5e-247 859.0 955 53.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 4.3e-245 852.0 948 51.2
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 1.6e-244 850.1 961 49.8
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.6e-244 850.1 816 58.0
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 3.7e-244 849.0 941 52.1
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 4.8e-244 848.6 980 51.9
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 4.8e-244 848.6 980 50.1
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 3.1e-243 845.9 959 50.7
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 1.2e-242 844.0 964 48.9
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 3.4e-242 842.4 976 50.0
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.9e-241 839.3 1009 49.8
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 4.9e-241 838.6 948 51.3
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 1.4e-240 837.0 965 48.3
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 4.2e-240 835.5 970 50.5
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.6e-239 833.6 973 49.9
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 6.7e-238 828.2 977 50.4
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 1.5e-237 827.0 961 50.5
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.5e-237 827.0 848 57.0
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 3.3e-237 825.9 972 49.5
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 3.3e-237 825.9 944 50.7
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 1.3e-236 823.9 915 51.1
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 1.3e-236 823.9 971 49.5
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.3e-236 823.9 978 50.5
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.6e-236 823.5 959 49.0
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 3.7e-236 822.4 965 49.8
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 3.7e-236 822.4 965 49.8
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.8e-236 822.0 984 50.9
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 3.1e-235 819.3 959 48.1
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.4e-232 810.4 935 48.6
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 1.4e-232 810.4 668 63.0
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 4.2e-232 808.9 962 49.0
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 5.5e-232 808.5 980 49.3
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 1.0e-230 804.3 987 49.2
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.3e-230 803.9 947 50.4
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 5.7e-229 798.5 930 48.6
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 8.2e-228 794.7 955 48.2
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 2.6e-226 789.6 957 49.2
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 4.5e-226 788.9 947 49.8
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 1.7e-225 786.9 668 61.4
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 1.7e-225 786.9 680 59.9
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 2.9e-225 786.2 957 47.0
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 1.9e-224 783.5 955 47.9
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 1.9e-224 783.5 957 47.6
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 1.0e-222 777.7 954 49.0
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 2.0e-221 773.5 976 46.8
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.5e-221 773.1 856 52.1
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 6.3e-220 768.5 905 51.0
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 1.1e-219 767.7 987 45.8
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 2.2e-217 760.0 963 46.7
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 8.5e-217 758.1 977 47.6
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 6.1e-215 751.9 933 47.4
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 1.7e-212 743.8 927 47.4
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 2.2e-209 733.4 823 51.9
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 2.2e-209 733.4 671 57.4
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 2.0e-205 720.3 983 44.7
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 5.7e-205 718.8 932 48.4
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 2.2e-204 716.8 957 44.5
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.8e-203 713.8 666 55.3
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 1.8e-198 697.2 961 44.8
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 3.0e-198 696.4 669 53.1
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 7.7e-194 681.8 602 61.5
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 6.1e-183 645.6 942 43.1
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 6.1e-183 645.6 665 52.5
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 7.0e-179 632.1 746 51.1
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 1.7e-169 600.9 690 47.7
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.1e-166 591.7 426 69.7
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.9e-163 580.9 412 70.6
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 2.1e-154 550.8 610 49.2
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 2.5e-152 543.9 968 38.6
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 2.4e-150 537.3 683 44.8
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 2.6e-149 533.9 701 45.5
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 3.5e-146 523.5 642 45.2
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 4.9e-140 503.1 568 49.8
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.2e-139 500.4 725 44.0
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.3e-132 478.4 537 53.4
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 4.3e-128 463.4 767 40.9
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 3.0e-121 440.7 666 41.0
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 1.7e-116 424.9 684 37.6
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 9.4e-107 392.5 446 47.3
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 6.5e-100 369.8 523 44.9
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 5.5e-91 340.1 288 62.5
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 3.5e-85 320.9 235 70.2
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 2.4e-78 298.1 418 40.2
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.2e-75 287.3 180 75.6
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 2.9e-68 264.6 234 59.0
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 5.0e-68 263.8 186 68.3
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.4e-65 255.8 179 69.8
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 2.7e-61 241.5 253 54.9
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 1.2e-56 226.1 240 51.2
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 9.5e-51 206.5 150 64.0
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.7e-50 204.1 134 73.9
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 8.1e-50 203.4 175 58.9
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 8.9e-49 199.9 133 72.9
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 5.1e-44 184.1 114 71.1
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 5.6e-43 180.6 220 47.3
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 6.4e-39 167.2 315 36.2
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 1.3e-31 142.9 542 26.9
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 8.7e-28 130.2 79 77.2
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 9.0e-25 120.2 205 40.5
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 6.4e-23 114.0 592 23.1
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 9.6e-19 100.1 308 30.8
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 4.2e-14 84.7 343 27.7
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 7.4e-11 73.9 47 70.2
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 7.4e-11 73.9 49 67.3
Zm00001eb333660 Zea mays HOM05D000230 ORTHO05D010966 5.8e-08 64.3 47 59.6


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