Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 8.8e-170 600.1 288 100.0
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 8.9e-122 440.7 266 82.0
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.3e-77 293.9 252 55.6
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 5.7e-76 288.5 266 55.6
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 4.1e-74 282.3 266 52.6
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 1.7e-72 276.9 266 53.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 2.9e-72 276.2 264 52.3
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 5.5e-71 271.9 250 52.0
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 4.6e-70 268.9 250 52.4
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.0e-69 267.7 266 50.8
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 3.0e-69 266.2 266 51.1
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 5.7e-68 261.9 266 49.2
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 2.8e-67 259.6 277 46.6
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 4.1e-66 255.8 267 48.3
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 5.3e-66 255.4 265 47.9
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 4.5e-65 252.3 228 51.8
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.9e-65 251.9 274 47.4
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 7.7e-65 251.5 252 49.6
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 7.7e-65 251.5 232 53.9
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 7.7e-65 251.5 270 47.4
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 1.0e-64 251.1 250 48.0
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.0e-64 251.1 228 51.3
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.0e-64 251.1 254 50.4
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 5.0e-64 248.8 261 46.4
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.1e-63 247.7 252 49.2
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.1e-63 247.7 270 46.3
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.4e-63 247.3 228 52.2
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.9e-63 246.9 245 45.7
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 2.5e-63 246.5 228 52.6
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 2.5e-63 246.5 237 50.6
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.5e-63 246.5 237 51.5
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 3.2e-63 246.1 253 47.8
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 4.2e-63 245.7 237 51.5
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 7.2e-63 245.0 261 46.0
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.2e-63 245.0 237 51.1
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.2e-62 244.2 268 48.1
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 1.6e-62 243.8 267 44.6
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 2.1e-62 243.4 236 51.7
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 2.7e-62 243.0 252 48.8
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.7e-62 243.0 234 51.7
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.6e-62 242.7 235 50.2
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 3.6e-62 242.7 276 44.6
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 4.7e-62 242.3 230 50.4
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 6.1e-62 241.9 272 44.9
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 7.9e-62 241.5 227 50.7
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.0e-61 241.1 245 44.5
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.4e-61 240.7 245 44.9
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.9e-61 239.2 251 48.2
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 6.7e-61 238.4 251 47.8
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 6.7e-61 238.4 249 46.6
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.0e-60 236.9 268 47.0
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 3.3e-60 236.1 232 48.7
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 4.4e-60 235.7 234 47.4
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 4.4e-60 235.7 262 42.7
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 9.7e-60 234.6 236 48.7
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 9.7e-60 234.6 229 48.0
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.7e-59 233.8 227 50.2
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 2.8e-59 233.0 237 48.1
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 6.3e-59 231.9 267 45.3
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 8.2e-59 231.5 220 51.4
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.1e-58 231.1 268 47.4
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.4e-58 230.7 267 48.3
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 3.1e-58 229.6 268 46.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 4.1e-58 229.2 267 42.3
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 5.3e-58 228.8 245 46.5
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.2e-57 227.6 267 44.6
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 2.0e-57 226.9 268 44.4
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 2.6e-57 226.5 226 49.6
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.9e-57 225.3 245 45.7
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 3.8e-56 222.6 226 46.5
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 5.0e-56 222.2 233 46.4
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 5.0e-56 222.2 234 50.0
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 6.5e-56 221.9 229 48.0
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 6.5e-56 221.9 229 48.0
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 6.5e-56 221.9 229 48.0
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 6.5e-56 221.9 212 50.5
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 6.5e-56 221.9 235 45.5
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 6.5e-56 221.9 270 43.7
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 8.5e-56 221.5 229 47.6
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-55 221.1 251 47.0
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 1.5e-55 220.7 220 47.7
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 1.5e-55 220.7 254 45.7
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.9e-55 220.3 265 42.3
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 1.9e-55 220.3 235 48.1
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 1.9e-55 220.3 211 53.1
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.5e-55 219.9 250 43.6
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.2e-55 219.2 201 53.7
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 1.2e-54 217.6 230 46.5
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 2.1e-54 216.9 249 46.2
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 4.7e-54 215.7 230 47.8
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 6.1e-54 215.3 230 46.5
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 8.0e-54 214.9 242 45.5
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-53 214.2 218 47.2
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 3.0e-53 213.0 230 47.0
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 3.0e-53 213.0 262 43.9
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 3.0e-53 213.0 231 46.8
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 3.0e-53 213.0 231 46.8
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 3.0e-53 213.0 273 43.2
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 4.0e-53 212.6 212 47.2
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 4.0e-53 212.6 232 44.8
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 8.8e-53 211.5 230 45.7
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 1.2e-52 211.1 272 43.4
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 1.2e-52 211.1 266 41.4
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 2.6e-52 209.9 231 45.5
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 5.7e-52 208.8 230 48.7
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 5.7e-52 208.8 237 46.8
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 7.5e-52 208.4 204 50.5
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 7.5e-52 208.4 211 47.9
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 2.2e-51 206.8 231 45.9
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 2.2e-51 206.8 231 45.9
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 2.8e-51 206.5 237 43.0
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 3.7e-51 206.1 219 45.7
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 4.8e-51 205.7 185 56.8
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 4.8e-51 205.7 228 46.1
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 3.1e-50 203.0 219 47.0
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 3.1e-50 203.0 170 54.7
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 7.0e-50 201.8 219 45.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.0e-49 200.3 273 41.4
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 7.7e-49 198.4 214 46.7
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.3e-48 197.6 221 45.2
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.2e-48 196.8 223 41.7
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.8e-48 196.1 288 40.3
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.8e-48 196.1 270 40.4
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.5e-47 194.1 212 46.7
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 2.5e-47 193.4 236 41.5
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 3.2e-47 193.0 212 46.7
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 5.5e-47 192.2 275 40.7
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 4.7e-46 189.1 275 40.4
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.4e-45 187.6 250 41.2
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 4.0e-45 186.0 213 46.0
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 5.2e-45 185.7 182 52.7
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 5.2e-45 185.7 183 51.4
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 6.8e-45 185.3 309 35.9
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.8e-45 185.3 234 41.9
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 6.8e-45 185.3 202 44.1
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 6.8e-45 185.3 245 41.2
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 8.8e-45 184.9 180 50.6
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.6e-44 183.3 211 46.0
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 2.6e-44 183.3 182 50.5
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 5.7e-44 182.2 179 50.8
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 2.8e-43 179.9 258 38.4
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 8.3e-43 178.3 185 48.6
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.4e-42 177.6 252 40.9
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.6e-41 174.1 233 42.1
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 3.8e-40 169.5 275 34.9
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 4.2e-39 166.0 161 49.7
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 7.2e-39 165.2 221 37.6
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 4.4e-36 156.0 219 40.6
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.7e-36 155.6 137 51.8
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 7.5e-36 155.2 202 44.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 1.1e-34 151.4 200 43.0
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.8e-34 150.6 302 32.5
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 7.0e-34 148.7 166 45.8
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 7.8e-33 145.2 318 31.4
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.9e-32 143.3 265 32.1
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.5e-31 140.2 246 33.3
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.5e-28 131.0 240 37.1
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 3.4e-28 129.8 201 33.8
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 3.4e-28 129.8 222 35.6
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 9.8e-28 128.3 180 42.2
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.9e-27 126.7 122 45.9
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 2.4e-26 123.6 165 41.8
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 4.6e-25 119.4 122 44.3
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.6e-22 110.9 85 58.8
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.4e-21 107.8 149 42.3
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.9e-19 100.1 81 55.6
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 6.4e-19 99.0 226 30.5
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 6.4e-19 99.0 194 32.0
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.1e-18 98.2 135 39.3
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.2e-18 96.7 258 28.7
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 1.2e-17 94.7 248 27.0
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 7.3e-15 85.5 72 50.0
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 8.9e-13 78.6 99 40.4
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 4.4e-12 76.3 136 34.6
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 5.8e-12 75.9 95 38.9
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-10 70.1 130 30.0
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 1.2e-09 68.2 44 61.4
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 2.1e-09 67.4 88 43.2
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.7e-09 67.0 54 53.7
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 6.0e-09 65.9 132 35.6
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.0e-08 65.1 54 48.1
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 3.0e-08 63.5 42 61.9
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.5e-07 61.2 67 46.3


User provided reference genes

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