Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 1.7e-221 772.3 374 100.0
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 1.4e-175 619.8 481 67.4
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 3.1e-175 618.6 480 66.7
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 3.1e-175 618.6 480 66.7
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 3.4e-174 615.1 479 65.8
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 3.4e-174 615.1 479 66.4
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 5.9e-174 614.4 479 65.3
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 7.6e-174 614.0 479 65.1
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.3e-173 613.2 477 66.0
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.2e-173 612.5 483 64.6
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 2.2e-173 612.5 480 66.2
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 2.2e-173 612.5 480 65.8
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 2.9e-173 612.1 477 66.0
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 1.4e-172 609.8 480 65.8
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 3.2e-172 608.6 479 64.9
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 4.2e-172 608.2 477 64.8
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 5.5e-172 607.8 480 65.2
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 1.2e-171 606.7 480 65.4
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 1.6e-171 606.3 480 65.6
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 3.6e-171 605.1 477 64.8
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 6.1e-171 604.4 477 64.4
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.0e-170 603.6 474 64.8
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.8e-170 602.8 480 65.2
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 3.0e-170 602.1 480 64.4
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 3.9e-170 601.7 477 65.0
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 3.9e-170 601.7 480 65.0
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 5.1e-170 601.3 479 64.7
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 6.7e-170 600.9 479 64.5
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 6.7e-170 600.9 487 64.5
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 1.1e-169 600.1 479 64.5
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 1.5e-169 599.7 478 64.0
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 1.5e-169 599.7 478 64.0
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.9e-169 599.4 480 64.6
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 1.3e-168 596.7 479 63.7
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.3e-168 596.7 481 64.4
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 4.8e-168 594.7 478 64.0
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 4.8e-168 594.7 461 65.7
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 4.8e-168 594.7 480 65.0
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 1.1e-167 593.6 479 63.7
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 2.4e-167 592.4 479 62.6
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 6.9e-167 590.9 480 64.2
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 9.1e-167 590.5 490 63.1
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 2.0e-166 589.3 480 64.2
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 2.6e-166 589.0 483 62.9
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 3.4e-166 588.6 479 62.8
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 3.4e-166 588.6 480 63.8
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 4.5e-166 588.2 480 63.8
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 4.5e-166 588.2 480 63.5
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 5.9e-166 587.8 495 62.2
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 7.7e-166 587.4 483 62.7
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 7.7e-166 587.4 477 63.7
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 1.0e-165 587.0 480 62.9
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 1.7e-165 586.3 473 63.6
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 2.2e-165 585.9 480 63.8
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 2.2e-165 585.9 474 63.1
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 3.8e-165 585.1 475 63.6
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 1.4e-164 583.2 474 64.1
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 2.5e-164 582.4 474 64.3
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 2.5e-164 582.4 487 62.8
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 3.2e-164 582.0 481 62.4
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 7.2e-164 580.9 478 62.6
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 9.4e-164 580.5 474 63.7
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.6e-163 579.7 477 62.5
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 2.1e-163 579.3 445 66.1
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 3.6e-163 578.6 476 62.6
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 4.7e-163 578.2 483 62.5
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 1.0e-162 577.0 480 63.1
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 1.4e-162 576.6 481 62.8
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 2.3e-162 575.9 475 62.7
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 2.3e-162 575.9 472 63.3
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 2.3e-162 575.9 440 65.9
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 3.0e-162 575.5 477 63.3
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 3.0e-162 575.5 480 61.7
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 6.7e-162 574.3 475 62.5
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 8.8e-162 573.9 478 61.7
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 1.1e-161 573.5 473 62.2
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 1.1e-161 573.5 473 62.2
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 1.5e-161 573.2 475 61.5
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.5e-161 573.2 489 61.6
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 9.7e-161 570.5 473 61.9
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 9.7e-161 570.5 475 61.1
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 9.7e-161 570.5 473 62.6
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-160 570.1 480 62.5
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 2.2e-160 569.3 473 62.2
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 1.1e-159 567.0 473 61.3
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 1.8e-159 566.2 481 61.1
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 1.8e-159 566.2 475 61.7
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 4.1e-159 565.1 486 60.3
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 7.0e-159 564.3 456 62.5
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.2e-158 563.5 480 61.2
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.5e-158 563.1 459 62.7
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 2.0e-158 562.8 480 59.6
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 2.6e-158 562.4 477 61.0
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 3.4e-158 562.0 475 62.1
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 5.9e-158 561.2 457 63.5
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 3.8e-157 558.5 480 60.6
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 2.5e-156 555.8 482 60.2
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 5.5e-156 554.7 476 62.0
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 6.7e-154 547.7 366 73.5
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 9.1e-151 537.3 466 60.5
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 9.1e-151 537.3 309 81.9
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.2e-149 532.7 477 58.3
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 2.9e-149 532.3 466 60.5
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 3.8e-149 531.9 505 57.6
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.1e-147 526.2 500 57.0
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 6.7e-146 521.2 477 58.3
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.6e-142 510.0 306 76.5
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 3.8e-141 505.4 460 58.5
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 3.6e-139 498.8 306 75.5
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 5.2e-138 495.0 507 54.6
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 7.0e-135 484.6 470 53.4
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 1.7e-133 479.9 497 54.5
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 4.7e-131 471.9 480 54.0
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 1.5e-129 466.8 474 53.2
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 4.4e-129 465.3 473 54.3
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 1.4e-127 460.3 309 74.8
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.4e-127 460.3 480 51.7
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 5.0e-117 425.2 483 51.3
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.2e-110 404.1 228 81.1
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 1.0e-109 401.0 238 79.0
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 1.1e-108 397.5 466 48.9
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 9.5e-108 394.4 230 79.1
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 2.1e-91 340.1 189 82.5
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 3.1e-82 309.7 309 51.1
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 6.7e-77 292.0 410 43.2
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 1.6e-75 287.3 148 86.5
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 6.9e-74 282.0 345 48.1
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 8.7e-69 265.0 176 69.9
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 5.6e-68 262.3 176 69.3
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 2.6e-65 253.4 166 71.1
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 4.5e-65 252.7 281 51.6
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 1.3e-64 251.1 166 70.5
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 2.9e-64 250.0 275 51.6
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 7.7e-49 198.7 99 86.9
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 7.7e-49 198.7 99 86.9
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 8.8e-37 158.7 105 70.5
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 1.5e-36 157.9 97 75.3
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 5.3e-34 149.4 201 44.8
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 3.5e-33 146.7 111 65.8
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 1.7e-32 144.4 309 32.4
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 6.5e-32 142.5 81 77.8
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 2.1e-30 137.5 320 33.1
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 1.8e-29 134.4 84 75.0
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 3.0e-29 133.7 211 41.7
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.2e-28 131.7 228 38.2
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.2e-28 131.7 228 38.2
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 4.4e-28 129.8 77 77.9
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 4.7e-22 109.8 66 83.3
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 4.0e-21 106.7 66 80.3
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 4.4e-20 103.2 65 69.2
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 5.5e-15 86.3 72 56.9
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 3.6e-14 83.6 82 56.1
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 4.7e-14 83.2 103 48.5
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 1.3e-08 65.1 34 88.2
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 1.5e-07 61.6 52 55.8
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 1.5e-07 61.6 52 55.8
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 2.5e-07 60.8 50 56.0
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 5.6e-07 59.7 35 80.0
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 5.6e-07 59.7 58 55.2
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 7.3e-07 59.3 78 43.6
C03p16540 Brassica napus HOM05D004186 ORTHO05D011383 8.0e-06 55.8 82 39.0


User provided reference genes

Program Settings