Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02720 Aquilegia oxysepala HOM05D003241 ORTHO05D000401 2.7e-103 378.6 186 100.0
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 7.5e-13 78.2 59 69.5
Aqoxy7G02297 Aquilegia oxysepala HOM05D003241 ORTHO05D078300 7.0e-11 71.6 41 75.6
Aqoxy5G02115 Aquilegia oxysepala HOM05D017921 ORTHO05D077980 1.7e-09 67.0 58 50.0
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 3.0e-09 66.2 74 52.7
Lj2C819G2 Lonicera japonica HOM05D003241 ORTHO05D003812 3.9e-09 65.9 55 61.8
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 3.9e-09 65.9 53 64.2
Lj2A813G14 Lonicera japonica HOM05D003241 ORTHO05D003812 5.0e-09 65.5 74 52.7
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 1.1e-08 64.3 51 64.7
Actinidia38515 Actinidia chinensis HOM05D003241 ORTHO05D003812 1.5e-08 63.9 69 55.1
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 2.5e-08 63.2 59 57.6
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 4.3e-08 62.4 72 52.8
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 4.3e-08 62.4 59 55.9
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 5.6e-08 62.0 51 62.7
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 7.3e-08 61.6 71 52.1
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 9.5e-08 61.2 61 54.1
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 1.6e-07 60.5 69 52.2
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 2.1e-07 60.1 69 53.6
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 2.1e-07 60.1 69 53.6
Migut.J00827 Erythranthe guttata HOM05D003241 ORTHO05D003812 2.1e-07 60.1 74 45.9
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 2.8e-07 59.7 69 52.2
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 2.8e-07 59.7 53 58.5
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 3.6e-07 59.3 59 55.9
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 4.7e-07 58.9 69 52.2
Sp6g27340 Schrenkiella parvula HOM05D003241 ORTHO05D003812 4.7e-07 58.9 69 50.7
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 6.2e-07 58.5 69 50.7
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 6.2e-07 58.5 69 50.7
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 6.2e-07 58.5 69 50.7
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 6.2e-07 58.5 69 53.6
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 8.0e-07 58.2 69 50.7
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 8.0e-07 58.2 69 50.7
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 8.0e-07 58.2 69 50.7
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 8.0e-07 58.2 69 50.7
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 8.0e-07 58.2 51 60.8
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 8.0e-07 58.2 51 60.8
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 8.0e-07 58.2 59 52.5
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 8.0e-07 58.2 71 46.5
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 8.0e-07 58.2 51 62.7
Sc22g0003580 Simmondsia chinensis HOM05D003241 ORTHO05D003812 8.0e-07 58.2 69 52.2
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 1.1e-06 57.8 69 52.2
FvH4_4g15641 Fragaria vesca HOM05D003241 ORTHO05D003812 1.1e-06 57.8 59 55.9
FAN12G3728 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.1e-06 57.8 59 55.9
FAN20G2531 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.1e-06 57.8 59 55.9
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.1e-06 57.8 69 49.3
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.1e-06 57.8 69 49.3
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 1.1e-06 57.8 69 49.3
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.1e-06 57.8 51 58.8
FAN27G2894 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.4e-06 57.4 59 55.9
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 1.4e-06 57.4 69 49.3
TWI56G1359 Tripterygium wilfordii HOM05D020473 ORTHO05D026208 1.4e-06 57.4 87 32.2
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 1.8e-06 57.0 69 52.2
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 2.3e-06 56.6 51 56.9
FAN22G0104 Fragaria x ananassa HOM05D003241 ORTHO05D003812 2.3e-06 56.6 59 54.2
Glyma.15G216300 Glycine max HOM05D003241 ORTHO05D003812 2.3e-06 56.6 74 44.6
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 2.3e-06 56.6 49 61.2
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 3.1e-06 56.2 51 58.8
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 3.1e-06 56.2 69 49.3
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 3.1e-06 56.2 69 47.8
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 3.1e-06 56.2 51 56.9
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 4.0e-06 55.8 69 49.3
FAN15G1779 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.0e-06 55.8 59 54.2
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 4.0e-06 55.8 59 54.2
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 4.0e-06 55.8 59 54.2
BcaC04g18847 Brassica carinata HOM05D003241 ORTHO05D003812 5.2e-06 55.5 69 47.8
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 5.2e-06 55.5 69 49.3
MD17G1218600 Malus domestica HOM05D001576 ORTHO05D000401 5.2e-06 55.5 94 31.9
PSO339G1389 Papaver somniferum HOM05D003241 ORTHO05D003812 5.2e-06 55.5 51 56.9
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 6.8e-06 55.1 134 33.6
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 6.8e-06 55.1 74 44.6
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 6.8e-06 55.1 69 49.3
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 6.8e-06 55.1 51 56.9
PSO013G0353 Papaver somniferum HOM05D003241 ORTHO05D003812 6.8e-06 55.1 51 56.9
PSO339G6261 Papaver somniferum HOM05D003241 ORTHO05D003812 6.8e-06 55.1 51 56.9
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 6.8e-06 55.1 74 44.6
VMungo1127G0135 Vigna mungo HOM05D003241 ORTHO05D003812 6.8e-06 55.1 69 49.3
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 8.9e-06 54.7 51 54.9
CDE06G2045 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 8.9e-06 54.7 51 54.9
Lj1A444T9 Lonicera japonica HOM05D003241 ORTHO05D003812 8.9e-06 54.7 49 57.1
Lju445A0T12 Lonicera japonica HOM05D003241 ORTHO05D003812 8.9e-06 54.7 49 57.1


User provided reference genes

Program Settings