Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 2.8e-237 825.1 476 100.0
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 4.9e-133 478.8 367 66.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 9.2e-132 474.6 340 70.6
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 4.6e-131 472.2 349 68.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 1.0e-130 471.1 350 68.6
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 8.6e-130 468.0 340 69.7
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.9e-129 466.8 356 66.6
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 2.5e-129 466.5 363 65.8
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 7.3e-129 464.9 343 68.5
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 9.5e-129 464.5 349 66.5
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.8e-128 463.0 375 63.7
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.8e-127 460.3 355 65.1
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.3e-127 459.9 345 66.4
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 8.9e-127 458.0 348 68.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.2e-126 457.6 347 65.7
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.0e-126 456.8 349 68.2
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.0e-126 456.8 349 68.2
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 3.4e-126 456.1 349 68.2
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 4.4e-126 455.7 347 66.0
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 5.8e-126 455.3 344 68.3
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 9.9e-126 454.5 356 64.9
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.3e-125 454.1 345 68.7
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.7e-125 453.8 365 65.5
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 2.9e-125 453.0 346 66.8
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 4.9e-125 452.2 355 64.5
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 4.9e-125 452.2 355 64.2
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 8.4e-125 451.4 346 67.9
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 7.1e-124 448.4 359 65.2
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 9.2e-124 448.0 363 62.8
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.2e-123 447.6 349 65.3
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 4.6e-123 445.7 423 57.0
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 7.8e-123 444.9 341 65.7
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.3e-122 443.4 354 63.6
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 3.0e-122 443.0 355 63.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.1e-121 441.0 369 62.3
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.5e-121 440.7 345 65.5
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.9e-121 440.3 367 62.9
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 2.5e-121 439.9 397 59.2
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 5.6e-121 438.7 333 67.9
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 9.6e-121 438.0 345 65.2
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 9.6e-121 438.0 338 65.4
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.2e-120 437.6 361 62.9
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 2.1e-120 436.8 371 61.5
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 3.6e-120 436.0 347 64.3
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 4.7e-120 435.6 344 64.8
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 8.1e-120 434.9 368 60.6
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.1e-119 434.5 354 63.8
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 2.4e-119 433.3 350 63.7
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 8.9e-119 431.4 349 63.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 8.9e-119 431.4 348 61.2
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.2e-118 431.0 344 64.5
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.2e-118 431.0 353 64.0
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 3.4e-118 429.5 356 61.5
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 7.6e-118 428.3 332 64.8
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 9.9e-118 427.9 351 63.2
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 9.9e-118 427.9 350 63.4
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.9e-117 425.6 342 65.2
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 8.4e-117 424.9 345 63.5
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.9e-116 423.7 353 62.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 2.4e-116 423.3 354 62.4
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 9.3e-116 421.4 340 62.6
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 9.3e-116 421.4 348 62.4
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 9.3e-116 421.4 343 65.3
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.6e-115 420.6 341 63.9
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.6e-115 420.6 343 64.7
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 3.5e-115 419.5 343 65.3
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 4.6e-115 419.1 342 64.0
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 6.0e-115 418.7 343 65.6
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 1.7e-114 417.2 398 56.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.3e-114 416.8 342 65.2
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.9e-114 416.0 336 61.6
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 4.3e-113 412.5 349 61.3
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 4.3e-113 412.5 349 61.3
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 4.3e-113 412.5 350 62.0
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 7.3e-113 411.8 349 61.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 7.3e-113 411.8 337 63.2
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 3.6e-112 409.5 356 61.2
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 4.8e-112 409.1 368 59.0
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 4.8e-112 409.1 351 61.5
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 6.2e-112 408.7 349 60.2
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 6.2e-112 408.7 348 62.1
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 6.2e-112 408.7 348 60.9
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.1e-111 407.9 349 61.9
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 3.1e-111 406.4 349 61.3
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 3.1e-111 406.4 350 60.6
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 6.4e-109 398.7 344 61.3
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.9e-108 397.1 322 65.5
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.4e-108 396.7 348 58.6
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 2.7e-107 393.3 308 67.2
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.0e-106 391.3 354 59.0
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.1e-105 387.9 292 67.5
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.5e-105 387.5 350 58.9
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 3.0e-90 336.7 344 56.1
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 1.1e-89 334.7 383 47.8
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 4.3e-89 332.8 359 54.0
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 2.6e-86 323.6 240 67.9
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.5e-84 317.0 363 49.6
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 6.1e-83 312.4 352 50.3
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.6e-80 304.3 254 63.8
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.9e-75 285.4 212 69.8
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 5.5e-68 262.7 211 66.4
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.6e-67 261.2 202 66.8
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 3.0e-66 256.9 344 44.2
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.5e-65 254.6 345 45.2
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.8e-63 247.7 341 40.2
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.8e-56 223.8 353 39.1
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.4e-55 221.5 223 51.1
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.3e-45 187.6 153 62.7
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 1.3e-37 161.8 161 52.8
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.8e-31 141.4 311 31.5
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 8.9e-26 122.5 74 78.4
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 5.8e-25 119.8 102 59.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.9e-24 117.5 93 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.3e-20 102.8 115 47.8
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 2.1e-19 101.3 150 44.0
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 6.2e-19 99.8 346 27.7
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 6.4e-16 89.7 347 27.7
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 7.8e-14 82.8 113 46.9
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.2e-11 75.5 75 48.0


User provided reference genes

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