Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02149 Aquilegia oxysepala HOM05D000951 ORTHO05D077320 4.9e-90 334.3 158 100.0
Aqoxy7G02098 Aquilegia oxysepala HOM05D000951 ORTHO05D001597 5.4e-12 75.1 40 85.0
COL.COLO4_05763 Corchorus olitorius HOM05D000951 ORTHO05D001597 5.6e-09 65.1 39 71.8
Nn8g39389 Nelumbo nucifera HOM05D000951 ORTHO05D001597 7.3e-09 64.7 40 72.5
PGR102G2134 Punica granatum HOM05D000951 ORTHO05D001597 7.3e-09 64.7 40 70.0
MD00G1107200 Malus domestica HOM05D000951 ORTHO05D001597 1.6e-08 63.5 39 71.8
MD02G1035100 Malus domestica HOM05D000951 ORTHO05D001597 1.6e-08 63.5 56 57.1
Atru.chr7.1199 Acer truncatum HOM05D000951 ORTHO05D001597 2.1e-08 63.2 39 71.8
GSVIVG01015504001 Vitis vinifera HOM05D000951 ORTHO05D001597 2.1e-08 63.2 40 70.0
Eucgr.C01134 Eucalyptus grandis HOM05D000951 ORTHO05D001597 2.8e-08 62.8 55 56.4
Hma1.2p1_0665F.1_g199140 Hydrangea macrophylla HOM05D000951 ORTHO05D001597 2.8e-08 62.8 40 70.0
Oeu058063.1 Olea europaea HOM05D000951 ORTHO05D001597 2.8e-08 62.8 40 70.0
HanXRQChr12g0356351 Helianthus annuus HOM05D000951 ORTHO05D001597 4.7e-08 62.0 56 53.6
RcHm_v2.0_Chr2g0089111 Rosa chinensis HOM05D000951 ORTHO05D001597 4.7e-08 62.0 56 55.4
TWI63G0382 Tripterygium wilfordii HOM05D000951 ORTHO05D001597 4.7e-08 62.0 40 70.0
AL6G31630 Arabidopsis lyrata HOM05D000951 ORTHO05D001597 6.2e-08 61.6 40 67.5
AT5G20080 Arabidopsis thaliana HOM05D000951 ORTHO05D001597 6.2e-08 61.6 40 67.5
Carub.0006s1846 Capsella rubella HOM05D000951 ORTHO05D001597 6.2e-08 61.6 40 67.5
CARHR192750 Cardamine hirsuta HOM05D000951 ORTHO05D001597 6.2e-08 61.6 40 67.5
Prupe.7G239800 Prunus persica HOM05D000951 ORTHO05D001597 6.2e-08 61.6 40 70.0
QL02p087833 Quercus lobata HOM05D000951 ORTHO05D001597 6.2e-08 61.6 39 71.8
TWI34G0260 Tripterygium wilfordii HOM05D000951 ORTHO05D001597 8.1e-08 61.2 40 65.0
Lsat_1_v5_gn_5_97060 Lactuca sativa HOM05D000951 ORTHO05D001597 1.1e-07 60.8 39 66.7
Actinidia22002 Actinidia chinensis HOM05D000951 ORTHO05D001597 1.4e-07 60.5 40 62.5
Aa31LG6G8050 Aethionema arabicum HOM05D000951 ORTHO05D001597 1.8e-07 60.1 40 65.0
CSS0016952 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 2.3e-07 59.7 40 62.5
CSS0049606 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 2.3e-07 59.7 40 62.5
Ciclev10008900m.g Citrus clementina HOM05D000951 ORTHO05D001597 2.3e-07 59.7 40 65.0
Dinv36545 Davidia involucrata HOM05D000951 ORTHO05D001597 3.1e-07 59.3 40 65.0
PSO170G4324 Papaver somniferum HOM05D000951 ORTHO05D001597 3.1e-07 59.3 39 64.1
PSO455G0024 Papaver somniferum HOM05D000951 ORTHO05D001597 3.1e-07 59.3 39 64.1
Cpa.g.c35493 Carica papaya HOM05D000951 ORTHO05D001597 4.0e-07 58.9 39 69.2
CANSAT11G2446 Cannabis sativa HOM05D000951 ORTHO05D001597 5.2e-07 58.5 40 67.5
Duzib150G0417 Durio zibethinus HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 65.0
Duzib168G1010 Durio zibethinus HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 65.0
Gohir.A06G057300 Gossypium hirsutum HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 65.0
Gohir.D06G055600 Gossypium hirsutum HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 65.0
THA.LOC104799648 Tarenaya hassleriana HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 65.0
Thecc.09G123300 Theobroma cacao HOM05D000951 ORTHO05D001597 6.8e-07 58.2 40 67.5
TAR625G0129 Trochodendron aralioides HOM05D000951 ORTHO05D001597 6.8e-07 58.2 39 64.1
Thhalv10014199m.g Eutrema salsugineum HOM05D000951 ORTHO05D001597 8.9e-07 57.8 40 62.5
Manes.14G130700 Manihot esculenta HOM05D000951 ORTHO05D001597 8.9e-07 57.8 39 66.7
Sp6g24330 Schrenkiella parvula HOM05D000951 ORTHO05D001597 8.9e-07 57.8 40 62.5
Migut.J01171 Erythranthe guttata HOM05D000951 ORTHO05D001597 1.5e-06 57.0 40 62.5
FvH4_1g03580 Fragaria vesca HOM05D000951 ORTHO05D001597 2.0e-06 56.6 41 65.9
FAN19G0775 Fragaria x ananassa HOM05D000951 ORTHO05D001597 2.0e-06 56.6 41 65.9
Sabra06G0168500 Salix brachista HOM05D000951 ORTHO05D001597 2.0e-06 56.6 42 61.9
BcaB01g04810 Brassica carinata HOM05D000951 ORTHO05D001597 2.6e-06 56.2 39 61.5
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 2.6e-06 56.2 39 61.5
CiPaw.03G242000 Carya illinoinensis HOM05D000951 ORTHO05D001597 2.6e-06 56.2 40 65.0
ClCG11G002910 Citrullus lanatus HOM05D000951 ORTHO05D001597 2.6e-06 56.2 40 65.0
FAN23G0118 Fragaria x ananassa HOM05D000951 ORTHO05D001597 2.6e-06 56.2 41 65.9
MELO3C004519.2 Cucumis melo HOM05D000951 ORTHO05D001597 3.4e-06 55.8 40 65.0
CsaV3_2G002740 Cucumis sativus L. HOM05D000951 ORTHO05D001597 3.4e-06 55.8 40 62.5
Cc06_g08770 Coffea canephora HOM05D000951 ORTHO05D001597 4.4e-06 55.5 39 61.5
FAN28G2833 Fragaria x ananassa HOM05D000951 ORTHO05D001597 4.4e-06 55.5 41 65.9
Potri.006G218600 Populus trichocarpa HOM05D000951 ORTHO05D001597 4.4e-06 55.5 39 66.7
MSTRG.19606 Avicennia marina HOM05D000951 ORTHO05D001597 5.8e-06 55.1 40 60.0
Gorai.010G064900 Gossypium raimondii HOM05D000951 ORTHO05D001597 7.6e-06 54.7 40 62.5
Solyc05g018520.3 Solanum lycopersicum HOM05D000951 ORTHO05D001597 7.6e-06 54.7 40 62.5
Sopen05g015640 Solanum pennellii HOM05D000951 ORTHO05D001597 7.6e-06 54.7 40 62.5


User provided reference genes

Program Settings