Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 3.0e-167 592.0 356 100.0
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 3.6e-80 302.8 317 58.4
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.2e-78 297.7 336 62.2
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 2.0e-78 297.0 342 59.6
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.3e-73 279.6 357 50.7
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 4.3e-73 279.3 339 61.1
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 5.2e-71 272.3 283 65.0
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 5.2e-71 272.3 283 65.0
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.4e-68 264.2 273 63.7
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 2.4e-68 263.5 310 57.1
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 3.2e-68 263.1 279 63.8
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 5.4e-68 262.3 284 59.9
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 4.6e-67 259.2 319 53.6
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 7.8e-67 258.5 266 62.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.0e-66 258.1 284 59.2
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.0e-66 258.1 301 59.5
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 2.3e-66 256.9 274 56.9
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 5.0e-66 255.8 283 59.4
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 6.6e-66 255.4 361 47.1
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 6.6e-66 255.4 311 53.1
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 2.5e-65 253.4 364 53.8
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 4.3e-65 252.7 291 56.4
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 5.6e-65 252.3 283 58.7
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 7.3e-65 251.9 309 60.8
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.2e-64 251.1 291 57.0
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 6.2e-64 248.8 318 50.3
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 8.0e-64 248.4 308 62.0
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 4.0e-63 246.1 278 54.0
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 6.8e-63 245.4 313 51.1
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.7e-61 240.7 302 48.7
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 2.2e-61 240.4 315 55.9
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 2.9e-61 240.0 327 55.4
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 3.7e-61 239.6 326 51.5
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 6.4e-61 238.8 272 59.2
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.1e-60 238.0 322 51.9
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.1e-60 238.0 318 53.8
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.9e-60 237.3 322 47.8
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.9e-60 237.3 317 58.0
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 2.4e-60 236.9 335 53.1
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.2e-60 236.5 318 57.2
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 4.1e-60 236.1 263 62.4
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 7.0e-60 235.3 264 53.8
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 9.2e-60 235.0 304 54.9
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 9.2e-60 235.0 325 44.3
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.2e-59 234.6 338 51.8
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.6e-59 234.2 275 59.3
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 2.0e-59 233.8 281 56.2
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 2.0e-59 233.8 314 58.9
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 2.7e-59 233.4 320 57.2
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 4.6e-59 232.6 265 56.2
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 6.0e-59 232.3 360 47.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 6.0e-59 232.3 319 55.8
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 7.8e-59 231.9 272 50.7
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.0e-58 231.5 326 55.5
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 1.3e-58 231.1 310 49.0
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 1.3e-58 231.1 264 55.7
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.7e-58 230.7 278 54.0
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 2.3e-58 230.3 317 54.9
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.3e-58 230.3 272 54.4
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 2.3e-58 230.3 339 51.0
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.0e-58 229.9 263 53.2
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 6.6e-58 228.8 262 61.8
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 8.6e-58 228.4 259 63.3
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 8.6e-58 228.4 264 58.7
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.9e-57 227.3 289 54.3
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.9e-57 227.3 282 52.5
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 5.6e-57 225.7 261 58.2
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 1.2e-56 224.6 314 51.0
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.6e-56 224.2 273 59.3
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 2.8e-56 223.4 274 47.8
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 3.6e-56 223.0 261 62.8
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 8.1e-56 221.9 286 48.3
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.1e-55 221.5 271 50.2
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 1.4e-55 221.1 272 48.9
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 2.3e-55 220.3 259 61.4
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 3.1e-55 219.9 258 55.4
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.2e-54 218.0 260 58.1
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 7.5e-54 215.3 271 48.3
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 3.7e-53 213.0 267 51.3
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 6.4e-53 212.2 261 51.7
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.1e-52 211.5 272 53.3
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.4e-52 210.3 414 41.3
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 9.2e-52 208.4 322 48.1
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 9.2e-52 208.4 277 50.2
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 5.1e-50 202.6 268 50.4
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.6e-50 202.2 323 46.4
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 6.6e-50 202.2 273 52.7
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.9e-49 200.7 256 59.8
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.9e-49 200.7 323 51.7
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 5.6e-49 199.1 285 46.0
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 4.7e-48 196.1 268 46.3
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 8.9e-47 191.8 176 56.2
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.0e-46 190.7 350 42.6
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 4.4e-46 189.5 224 51.8
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.7e-45 187.6 272 54.0
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.4e-44 184.5 159 60.4
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 1.9e-44 184.1 153 64.1
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.1e-44 183.0 177 54.2
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 3.0e-42 176.8 152 63.2
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 1.5e-41 174.5 296 50.3
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 3.1e-39 166.8 231 56.3
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.2e-36 156.8 125 63.2
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 2.4e-31 140.6 271 43.5
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 1.5e-25 121.3 258 38.8
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 9.0e-23 112.1 287 32.4
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 3.2e-20 103.6 310 32.3
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 2.1e-19 100.9 113 51.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 3.1e-15 87.0 243 32.9
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.1e-12 78.6 184 34.8
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 2.5e-12 77.4 46 71.7
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 3.5e-11 73.6 45 62.2
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 6.0e-11 72.8 137 35.8
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 1.3e-08 65.1 114 63.2
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 2.8e-08 63.9 60 43.3
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 4.8e-08 63.2 84 48.8
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 8.2e-08 62.4 149 42.3


User provided reference genes

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