Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 5.6e-184 647.5 336 100.0
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.3e-100 369.8 290 67.9
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 9.2e-94 347.8 290 65.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.1e-89 334.3 283 66.1
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.3e-89 333.2 285 64.2
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 6.8e-89 331.6 283 65.4
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.0e-88 330.1 265 64.5
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 9.8e-88 327.8 266 63.2
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.3e-87 327.4 289 62.3
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.7e-87 327.0 266 64.7
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 2.9e-87 326.2 265 63.8
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 7.0e-86 321.6 289 61.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.0e-84 317.8 272 62.1
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 8.6e-84 314.7 215 73.5
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 7.3e-83 311.6 295 59.7
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 7.3e-83 311.6 284 59.9
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.2e-82 310.8 295 57.3
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.2e-82 310.8 229 69.9
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.6e-82 309.3 268 62.7
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.6e-82 309.3 268 62.7
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 4.7e-82 308.9 277 61.7
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 6.2e-82 308.5 270 62.6
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.4e-81 307.4 286 59.8
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.4e-81 307.4 272 59.9
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 2.3e-81 306.6 255 62.0
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 3.1e-81 306.2 278 60.4
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 3.1e-81 306.2 295 58.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 5.2e-81 305.4 264 61.0
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.2e-81 305.4 291 59.8
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 6.8e-81 305.1 291 58.4
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.2e-80 304.3 288 60.4
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 2.0e-80 303.5 282 60.3
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.0e-80 303.5 288 60.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 3.4e-80 302.8 288 58.7
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 4.4e-80 302.4 261 61.3
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 5.8e-80 302.0 286 58.7
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.5e-80 301.6 290 56.9
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 9.9e-80 301.2 281 59.8
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 9.9e-80 301.2 270 60.4
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 6.4e-79 298.5 263 61.2
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 8.3e-79 298.1 275 60.0
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.1e-78 297.7 289 57.4
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.4e-78 296.6 287 57.1
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 3.2e-78 296.2 213 70.4
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 3.2e-78 296.2 264 61.0
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 4.1e-78 295.8 263 61.6
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 5.4e-78 295.4 218 72.0
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 7.1e-78 295.0 213 70.0
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.6e-77 293.9 275 57.5
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.5e-77 292.7 205 72.7
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 6.0e-77 292.0 286 59.8
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.3e-76 290.8 286 59.4
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.7e-76 290.4 189 74.1
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 2.3e-76 290.0 223 67.7
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 2.3e-76 290.0 223 67.7
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.3e-76 290.0 279 58.8
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 3.0e-76 289.7 225 66.2
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 3.0e-76 289.7 223 67.3
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 3.0e-76 289.7 310 55.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 5.1e-76 288.9 288 56.2
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 8.6e-76 288.1 271 59.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 8.6e-76 288.1 279 58.4
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 8.6e-76 288.1 261 58.6
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.5e-75 287.3 214 69.2
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.5e-75 287.3 214 69.2
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.5e-75 287.3 216 68.1
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.9e-75 287.0 270 58.9
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 4.3e-75 285.8 232 63.8
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 7.3e-75 285.0 295 56.6
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 7.3e-75 285.0 218 65.6
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 2.8e-74 283.1 213 68.1
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 2.8e-74 283.1 232 64.2
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 3.6e-74 282.7 210 66.2
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 4.7e-74 282.3 281 56.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 4.7e-74 282.3 290 54.8
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.7e-74 282.3 213 68.1
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 6.2e-74 282.0 218 65.6
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 8.9e-73 278.1 280 55.4
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.4e-72 276.2 222 64.4
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 7.6e-72 275.0 258 60.1
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 7.6e-72 275.0 216 64.8
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 4.9e-71 272.3 274 54.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 6.4e-71 271.9 274 54.0
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.4e-70 270.8 158 84.8
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.4e-70 270.8 289 52.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.9e-70 270.4 182 70.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 6.0e-69 265.4 275 54.2
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.3e-68 264.2 275 54.5
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.1e-67 261.2 218 62.4
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 3.3e-67 259.6 220 60.5
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.3e-65 252.3 280 55.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.3e-65 252.3 282 53.5
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 6.9e-65 251.9 245 58.4
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 8.4e-63 245.0 208 61.1
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.2e-61 241.1 289 52.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 6.0e-61 238.8 172 70.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 7.8e-61 238.4 222 57.7
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.4e-57 227.6 288 46.9
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 3.1e-57 226.5 253 53.0
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 9.0e-57 224.9 218 58.3
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.7e-55 220.7 176 67.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 4.6e-53 212.6 221 49.8
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.6e-51 204.9 288 45.1
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 2.9e-47 193.4 345 39.7
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 6.0e-45 185.7 130 69.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.1e-25 121.7 178 39.3
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.7e-24 115.5 65 81.5
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 8.5e-23 112.1 172 37.2
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 9.1e-17 92.0 62 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.2e-10 70.9 101 39.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 4.1e-09 66.6 58 60.3


User provided reference genes

Program Settings