Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01281 Aquilegia oxysepala HOM05D003008 ORTHO05D003346 1.0e-306 1055.8 509 100.0
Aqoxy1G01512 Aquilegia oxysepala HOM05D003008 ORTHO05D003346 7.9e-222 773.9 725 59.9
Nn7g37799 Nelumbo nucifera HOM05D003008 ORTHO05D003346 3.7e-139 499.2 709 41.3
GSVIVG01021728001 Vitis vinifera HOM05D003008 ORTHO05D003346 2.4e-138 496.5 676 42.9
Dinv08829 Davidia involucrata HOM05D003008 ORTHO05D003346 5.1e-136 488.8 697 41.3
CDE01G0377 Ceratophyllum demersum HOM05D003008 ORTHO05D003346 1.1e-135 487.6 576 45.3
Eucgr.D01628 Eucalyptus grandis HOM05D003008 ORTHO05D003346 2.5e-135 486.5 626 42.7
Cc09_g07360 Coffea canephora HOM05D003008 ORTHO05D003346 4.3e-135 485.7 628 43.0
CSS0037242 Camellia sinensis var. sinensis HOM05D003008 ORTHO05D003346 8.1e-134 481.5 701 40.1
Migut.M01920 Erythranthe guttata HOM05D003008 ORTHO05D003346 8.1e-134 481.5 703 39.8
Glyma.15G134500 Glycine max HOM05D003008 ORTHO05D003346 1.4e-133 480.7 634 43.2
CiPaw.03G113700 Carya illinoinensis HOM05D003008 ORTHO05D003346 1.8e-133 480.3 679 40.6
HPP92_013208 Vanilla planifolia HOM05D003008 ORTHO05D003346 3.1e-133 479.6 451 53.4
Sopen02g006420 Solanum pennellii HOM05D003008 ORTHO05D003346 6.8e-133 478.4 664 41.7
Phvul.006G124400 Phaseolus vulgaris HOM05D003008 ORTHO05D003346 8.9e-133 478.0 676 41.3
Glyma.09G028600 Glycine max HOM05D003008 ORTHO05D003346 2.6e-132 476.5 638 42.3
Solyc02g022830.3 Solanum lycopersicum HOM05D003008 ORTHO05D003346 2.6e-132 476.5 666 41.6
PGR044G1782 Punica granatum HOM05D003008 ORTHO05D003346 4.4e-132 475.7 680 40.1
Ca_25498_v3 Cicer arietinum L. HOM05D003008 ORTHO05D003346 9.9e-132 474.6 684 39.8
ECA248G0148 Erigeron canadensis HOM05D003008 ORTHO05D003346 2.9e-131 473.0 645 41.1
Thecc.06G011200 Theobroma cacao HOM05D003008 ORTHO05D003346 6.4e-131 471.9 712 39.6
SalBow8G1512 Salvia bowleyana HOM05D003008 ORTHO05D003346 8.3e-131 471.5 707 39.6
VMungo0540G1323 Vigna mungo HOM05D003008 ORTHO05D003346 1.4e-130 470.7 677 41.2
vmacro03472 Vaccinium macrocarpon HOM05D003008 ORTHO05D003346 3.2e-130 469.5 644 40.7
MD10G1243800 Malus domestica HOM05D003008 ORTHO05D003346 4.1e-130 469.2 701 41.2
Lsat_1_v5_gn_1_91720 Lactuca sativa HOM05D003008 ORTHO05D003346 1.6e-129 467.2 677 39.9
Prupe.4G099700 Prunus persica HOM05D003008 ORTHO05D003346 1.6e-129 467.2 698 40.7
RcHm_v2.0_Chr5g0018171 Rosa chinensis HOM05D003008 ORTHO05D003346 1.6e-129 467.2 687 41.3
Lj1C1159T8 Lonicera japonica HOM05D003008 ORTHO05D003346 3.5e-129 466.1 664 41.4
ATR0763G210 Amborella trichopoda HOM05D003008 ORTHO05D003346 4.6e-129 465.7 645 40.9
arahy.Tifrunner.gnm1.ann1.WH7KDQ Arachis hypogaea HOM05D003008 ORTHO05D003346 6.0e-129 465.3 653 41.2
Oeu060320.2 Olea europaea HOM05D003008 ORTHO05D003346 1.7e-128 463.8 627 43.2
Lalb_Chr15g0088941 Lupinus albus HOM05D003008 ORTHO05D003346 3.9e-128 462.6 625 41.4
PSO675G7488 Papaver somniferum HOM05D003008 ORTHO05D003346 3.9e-128 462.6 615 42.9
FAN21G3776 Fragaria x ananassa HOM05D003008 ORTHO05D003346 6.6e-128 461.8 670 41.0
PSO541G5492 Papaver somniferum HOM05D003008 ORTHO05D003346 8.6e-128 461.5 615 42.9
Manes.14G125700 Manihot esculenta HOM05D003008 ORTHO05D003346 1.5e-127 460.7 712 39.7
QL03p057306 Quercus lobata HOM05D003008 ORTHO05D003346 1.9e-127 460.3 268 76.9
Nitab4.5_0000076g0040 Nicotiana tabacum HOM05D003008 ORTHO05D003346 2.5e-127 459.9 615 43.3
FvH4_3g11220 Fragaria vesca HOM05D003008 ORTHO05D003346 4.3e-127 459.1 686 40.2
Sc10g0009650 Simmondsia chinensis HOM05D003008 ORTHO05D003346 1.2e-126 457.6 261 79.3
TWI15G0228 Tripterygium wilfordii HOM05D003008 ORTHO05D003346 1.2e-126 457.6 269 77.0
Medtr2g031620 Medicago truncatula HOM05D003008 ORTHO05D003346 2.1e-126 456.8 623 40.9
Actinidia33712 Actinidia chinensis HOM05D003008 ORTHO05D003346 3.6e-126 456.1 699 39.8
Lj6g0020929 Lotus japonicus HOM05D003008 ORTHO05D003346 3.6e-126 456.1 614 40.6
Atru.chr10.699 Acer truncatum HOM05D003008 ORTHO05D003346 4.7e-126 455.7 262 80.2
Gohir.A05G112501 Gossypium hirsutum HOM05D003008 ORTHO05D003346 4.7e-126 455.7 660 39.7
Lalb_Chr18g0058241 Lupinus albus HOM05D003008 ORTHO05D003346 8.1e-126 454.9 614 41.9
SGA_v2.0_scaffold223G42877 Striga asiatica HOM05D003008 ORTHO05D003346 1.4e-125 454.1 610 41.5
HanXRQChr01g0020641 Helianthus annuus HOM05D003008 ORTHO05D003346 4.0e-125 452.6 671 40.2
Gohir.D05G113000 Gossypium hirsutum HOM05D003008 ORTHO05D003346 1.2e-124 451.1 660 39.7
Sed0021502 Sechium edule HOM05D003008 ORTHO05D003346 1.2e-124 451.1 659 40.1
AUR62025821 Chenopodium quinoa HOM05D003008 ORTHO05D003346 2.0e-124 450.3 585 43.2
Potri.001G461300 Populus trichocarpa HOM05D003008 ORTHO05D003346 2.0e-124 450.3 706 38.4
Aa31LG6G11900 Aethionema arabicum HOM05D003008 ORTHO05D003346 7.6e-124 448.4 672 40.9
Ciclev10014667m.g Citrus clementina HOM05D003008 ORTHO05D003346 2.9e-123 446.4 261 76.2
Gorai.009G117100 Gossypium raimondii HOM05D003008 ORTHO05D003346 1.4e-122 444.1 267 75.3
Lj2A336T37 Lonicera japonica HOM05D003008 ORTHO05D003346 3.2e-122 443.0 264 74.2
HanXRQChr11g0340941 Helianthus annuus HOM05D003008 ORTHO05D003346 9.2e-122 441.4 262 76.3
MELO3C002865.2 Cucumis melo HOM05D003008 ORTHO05D003346 4.6e-121 439.1 645 39.5
Carub.0001s2896 Capsella rubella HOM05D003008 ORTHO05D003346 7.8e-121 438.3 694 38.3
CDE02G0274 Ceratophyllum demersum HOM05D003008 ORTHO05D003346 1.0e-120 438.0 621 40.4
Psat1g164800 Pisum sativum HOM05D003008 ORTHO05D003346 1.0e-120 438.0 260 75.8
TPR.G15179 Trifolium pratense HOM05D003008 ORTHO05D003346 1.7e-120 437.2 263 74.9
EL10Ac8g19523 Beta vulgaris HOM05D003008 ORTHO05D003346 2.3e-120 436.8 634 40.9
CsaV3_1G037560 Cucumis sativus L. HOM05D003008 ORTHO05D003346 3.9e-120 436.0 680 38.4
FAN25G1988 Fragaria x ananassa HOM05D003008 ORTHO05D003346 3.9e-120 436.0 259 74.9
THA.LOC104798583 Tarenaya hassleriana HOM05D003008 ORTHO05D003346 2.5e-119 433.3 267 74.5
Sabra16G0313000 Salix brachista HOM05D003008 ORTHO05D003346 1.6e-118 430.6 274 70.4
Ah.09g232330 Amaranthus hybridus HOM05D000070 ORTHO05D003346 2.8e-118 429.9 260 76.5
arahy.Tifrunner.gnm1.ann1.447SJP Arachis hypogaea HOM05D003008 ORTHO05D003346 3.6e-118 429.5 256 77.0
Thhalv10006950m.g Eutrema salsugineum HOM05D003008 ORTHO05D003346 3.6e-118 429.5 632 40.7
CARHR030150 Cardamine hirsuta HOM05D003008 ORTHO05D003346 4.7e-118 429.1 630 40.2
BcaC05g27092 Brassica carinata HOM05D003008 ORTHO05D003346 5.3e-117 425.6 273 73.3
C05p29740 Brassica napus HOM05D003008 ORTHO05D003346 5.3e-117 425.6 273 73.3
BolC5t31702H Brassica oleracea HOM05D003008 ORTHO05D003346 5.3e-117 425.6 273 73.3
DCAR_000835 Daucus carota HOM05D003008 ORTHO05D003346 9.0e-117 424.9 250 76.4
Duzib235G1093 Durio zibethinus HOM05D003008 ORTHO05D003346 1.2e-116 424.5 703 38.0
A09p35720 Brassica napus HOM05D003008 ORTHO05D003346 1.5e-116 424.1 273 72.9
BraA09t39097Z Brassica rapa HOM05D003008 ORTHO05D003346 1.5e-116 424.1 273 72.9
Zm00001eb274090 Zea mays HOM05D003008 ORTHO05D003346 2.0e-116 423.7 282 69.5
BcaB07g32707 Brassica carinata HOM05D003008 ORTHO05D003346 3.4e-116 422.9 273 72.9
Sp1g26580 Schrenkiella parvula HOM05D003008 ORTHO05D003346 1.7e-115 420.6 273 72.2
DCAR_007820 Daucus carota HOM05D003008 ORTHO05D003346 2.9e-115 419.9 651 38.7
AL1G44740 Arabidopsis lyrata HOM05D003008 ORTHO05D003346 3.8e-115 419.5 641 39.6
AT1G30680 Arabidopsis thaliana HOM05D003008 ORTHO05D003346 4.9e-115 419.1 621 40.3
SEGI_26502 Sequoiadendron giganteum HOM05D003008 ORTHO05D003346 1.1e-114 417.9 263 71.5
HPP92_005928 Vanilla planifolia HOM05D003008 ORTHO05D003346 9.3e-114 414.8 264 70.5
Mapoly0003s0305 Marchantia polymorpha HOM05D003008 ORTHO05D003346 1.2e-113 414.5 261 71.3
Pp3c12_26070 Physcomitrium patens HOM05D003008 ORTHO05D003346 1.5e-111 407.5 261 70.1
Rhsim13G0124600 Rhododendron simsii HOM05D003008 ORTHO05D003346 1.5e-111 407.5 661 36.8
GSVIVG01008778001 Vitis vinifera HOM05D003008 ORTHO05D003346 5.6e-111 405.6 677 37.8
AagrBONN_evm.TU.Sc2ySwM_117.1205 Anthoceros agrestis HOM05D003008 ORTHO05D003346 8.1e-110 401.7 262 68.3
MBI02_g32311_MAGBIO Magnolia biondii HOM05D003008 ORTHO05D003346 2.4e-109 400.2 293 64.2
SMO364G0389 Selaginella moellendorffii HOM05D003008 ORTHO05D003346 3.8e-107 392.9 253 70.8
COL.COLO4_22894 Corchorus olitorius HOM05D003008 ORTHO05D003346 7.1e-106 388.7 262 68.7
SHI24823 Sapria himalayana HOM05D003008 ORTHO05D003346 7.4e-103 378.6 230 73.9
CANSAT35G1991 Cannabis sativa HOM05D003008 ORTHO05D003346 9.9e-100 368.2 619 36.8
CBR_g16946 Chara braunii HOM05D003008 ORTHO05D003346 7.1e-98 362.1 271 61.3
AUR62029886 Chenopodium quinoa HOM05D003008 ORTHO05D003346 1.6e-97 360.9 332 56.3
MCO14G370 Micromonas commoda HOM05D003008 ORTHO05D003346 1.0e-96 358.2 260 63.8
Os06g0671700 Oryza sativa ssp. japonica HOM05D003008 ORTHO05D003346 2.5e-95 353.6 224 70.5
Cfa023567 Carpinus fangiana HOM05D003008 ORTHO05D003346 5.6e-95 352.4 652 36.0
PRCOL_00000580 Prasinoderma coloniale HOM05D003008 ORTHO05D003346 6.0e-89 332.4 307 53.7
CBR_g38556 Chara braunii HOM05D003008 ORTHO05D003346 1.3e-88 331.3 245 61.6
FAN16G0127 Fragaria x ananassa HOM05D003008 ORTHO05D003346 1.8e-88 330.9 251 62.9
unitig_92.g28176 Utricularia gibba HOM05D003008 ORTHO05D003346 9.7e-87 325.1 202 72.8
ClCG03G008470 Citrullus lanatus HOM05D003008 ORTHO05D003346 1.6e-86 324.3 320 53.4
Atru.chr2.1568 Acer truncatum HOM05D003008 ORTHO05D003346 2.6e-84 317.0 186 78.5
Oeu058493.2 Olea europaea HOM05D003008 ORTHO05D003346 1.6e-73 281.2 221 63.8
Cre12.g514950 Chlamydomonas reinhardtii HOM05D003008 ORTHO05D003346 1.1e-71 275.0 287 48.8
Haze_13591 Corylus avellana HOM05D003008 ORTHO05D003346 1.2e-57 228.4 210 53.8
Haze_13592 Corylus avellana HOM05D003008 ORTHO05D003346 1.7e-51 208.0 119 76.5
CAN.G39.25 Capsicum annuum HOM05D003008 ORTHO05D003346 1.9e-50 204.5 114 78.9
SGA_v2.0_scaffold1G00291 Striga asiatica HOM05D003008 ORTHO05D003346 1.9e-50 204.5 507 29.2
Cre12.g503150 Chlamydomonas reinhardtii HOM05D003008 ORTHO05D003346 2.0e-47 194.5 349 33.8
arahy.Tifrunner.gnm1.ann1.7QV6JY Arachis hypogaea HOM05D003008 ORTHO05D003346 3.1e-45 187.2 100 83.0
SEGI_40021 Sequoiadendron giganteum HOM05D003008 ORTHO05D003346 6.8e-40 169.5 133 58.6
Nitab4.5_0002005g0070 Nicotiana tabacum HOM05D003008 ORTHO05D003346 7.3e-34 149.4 394 28.7
MD05G1265800 Malus domestica HOM05D003008 ORTHO05D003346 1.4e-32 145.2 185 44.9
GSVIVG01021741001 Vitis vinifera HOM05D003008 ORTHO05D003346 1.5e-31 141.7 187 45.5
TAR626G0717 Trochodendron aralioides HOM05D003008 ORTHO05D003346 5.8e-31 139.8 204 40.2
arahy.Tifrunner.gnm1.ann1.SN2S9U Arachis hypogaea HOM05D003008 ORTHO05D003346 1.4e-29 135.2 459 25.3
Hma1.2p1_1413F.1_g281810 Hydrangea macrophylla HOM05D003008 ORTHO05D003346 4.6e-28 130.2 186 38.7
SEGI_37953 Sequoiadendron giganteum HOM05D003008 ORTHO05D003346 1.0e-27 129.0 75 76.0
Pp3c21_10530 Physcomitrium patens HOM05D003008 ORTHO05D003346 6.6e-27 126.3 108 59.3
Pp3c21_10540 Physcomitrium patens HOM05D003008 ORTHO05D003346 6.6e-27 126.3 108 59.3
Peaxi162Scf00155g00316 Petunia axillaris HOM05D003008 ORTHO05D003346 7.5e-23 112.8 496 24.6
SGA_v2.0_scaffold306G48030 Striga asiatica HOM05D003008 ORTHO05D003346 1.3e-22 112.1 140 40.7
CSS0042083 Camellia sinensis var. sinensis HOM05D003008 ORTHO05D003346 2.9e-22 110.9 123 42.3
CAN.G39.24 Capsicum annuum HOM05D003008 ORTHO05D003346 6.4e-22 109.8 60 78.3
Sabra16G0312800 Salix brachista HOM05D003008 ORTHO05D003346 6.4e-22 109.8 206 35.4
CAN.G39.23 Capsicum annuum HOM05D003008 ORTHO05D003346 3.2e-21 107.5 107 48.6
BcaB03g13821 Brassica carinata HOM05D003008 ORTHO05D003346 4.1e-21 107.1 206 35.9
SalBow8G4789 Salvia bowleyana HOM05D003008 ORTHO05D003346 5.4e-21 106.7 202 35.1
Nitab4.5_0002005g0080 Nicotiana tabacum HOM05D003008 ORTHO05D003346 1.0e-19 102.4 167 39.5
ATR0681G109 Amborella trichopoda HOM05D003008 ORTHO05D003346 1.7e-19 101.7 92 52.2
Oeu060323.2 Olea europaea HOM05D000022 ORTHO05D000071 6.6e-19 99.8 136 41.9
HanXRQChr17g0565071 Helianthus annuus HOM05D003008 ORTHO05D003346 1.5e-18 98.6 59 71.2
Gohir.D05G112900 Gossypium hirsutum HOM05D003008 ORTHO05D003346 3.3e-18 97.4 167 34.1
Dinv26204 Davidia involucrata HOM05D003008 ORTHO05D003346 4.3e-18 97.1 168 38.1
PSO063G4114 Papaver somniferum HOM05D003008 ORTHO05D003346 1.2e-17 95.5 233 32.6
Oeu058494.1 Olea europaea HOM05D000022 ORTHO05D000071 1.6e-17 95.1 130 46.2
Sabra16G0312900 Salix brachista HOM05D003008 ORTHO05D003346 2.8e-17 94.4 145 35.9
Actinidia33693 Actinidia chinensis HOM05D003008 ORTHO05D003346 3.6e-17 94.0 170 37.1
arahy.Tifrunner.gnm1.ann1.MYLU20 Arachis hypogaea HOM05D003008 ORTHO05D003346 3.6e-17 94.0 115 42.6
TWI15G0229 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 4.7e-17 93.6 126 39.7
arahy.Tifrunner.gnm1.ann1.57FUCZ Arachis hypogaea HOM05D003008 ORTHO05D003346 1.4e-16 92.0 115 41.7
COL.COLO4_22895 Corchorus olitorius HOM05D003008 ORTHO05D003346 1.8e-16 91.7 189 35.4
Sabra16G0312700 Salix brachista HOM05D003008 ORTHO05D003346 1.8e-16 91.7 143 35.7
Phvul.006G124200 Phaseolus vulgaris HOM05D003008 ORTHO05D003346 4.0e-16 90.5 142 38.7
Lalb_Chr18g0058251 Lupinus albus HOM05D003008 ORTHO05D003346 5.2e-16 90.1 81 51.9
Manes.09G088066 Manihot esculenta HOM05D003008 ORTHO05D003346 6.8e-16 89.7 101 46.5
Potri.001G461200 Populus trichocarpa HOM05D003008 ORTHO05D003346 8.9e-16 89.4 140 35.7
HPP92_005917 Vanilla planifolia HOM05D002182 ORTHO05D004671 8.9e-16 89.4 148 37.8
Lj1A1159T86 Lonicera japonica HOM05D003008 ORTHO05D003346 1.2e-15 89.0 123 41.5
TWI63G0820 Tripterygium wilfordii HOM05D003008 ORTHO05D003346 1.2e-15 89.0 150 34.7
Haze_05935 Corylus avellana HOM05D003008 ORTHO05D003346 2.6e-15 87.8 121 38.8
Nitab4.5_0001181g0080 Nicotiana tabacum HOM05D003008 ORTHO05D003346 3.4e-15 87.4 170 34.7
Lj6g0000719 Lotus japonicus HOM05D003008 ORTHO05D003346 7.6e-15 86.3 127 37.8
ClCG03G008500 Citrullus lanatus HOM05D003008 ORTHO05D003346 9.9e-15 85.9 183 31.1
ECA233G3161 Erigeron canadensis HOM05D003008 ORTHO05D003346 1.7e-14 85.1 102 40.2
Atru.chr10.698 Acer truncatum HOM05D003008 ORTHO05D003346 2.9e-14 84.3 100 42.0
FAN21G3010 Fragaria x ananassa HOM05D003008 ORTHO05D003346 2.9e-14 84.3 169 32.5
Cfa000776 Carpinus fangiana HOM05D003008 ORTHO05D003346 3.7e-14 84.0 121 38.0
CsaV3_1G037590 Cucumis sativus L. HOM05D003008 ORTHO05D003346 1.1e-13 82.4 154 33.1
CAN.G660.46 Capsicum annuum HOM05D003008 ORTHO05D003346 1.9e-13 81.6 117 35.0
FvH4_3g11200 Fragaria vesca HOM05D003008 ORTHO05D003346 4.1e-13 80.5 151 33.1
RcHm_v2.0_Chr5g0018141 Rosa chinensis HOM05D003008 ORTHO05D003346 7.1e-13 79.7 133 36.1
AT1G30660 Arabidopsis thaliana HOM05D003008 ORTHO05D003346 9.2e-13 79.3 129 40.3
Cpa.g.sc489.1 Carica papaya HOM05D003008 ORTHO05D003346 9.2e-13 79.3 132 32.6
Ciclev10015609m.g Citrus clementina HOM05D003008 ORTHO05D003346 9.2e-13 79.3 101 44.6
HanXRQChr01g0020621 Helianthus annuus HOM05D003008 ORTHO05D003346 9.2e-13 79.3 157 32.5
Sopen02g019320 Solanum pennellii HOM05D003008 ORTHO05D003346 1.2e-12 79.0 116 34.5
Solyc02g070230.2 Solanum lycopersicum HOM05D003008 ORTHO05D003346 2.1e-12 78.2 116 34.5
Sed0001268 Sechium edule HOM05D003008 ORTHO05D003346 6.0e-12 76.6 143 30.8
AL1G44720 Arabidopsis lyrata HOM05D003008 ORTHO05D003346 1.0e-11 75.9 107 42.1
QL05p064497 Quercus lobata HOM05D003008 ORTHO05D003346 2.3e-11 74.7 131 37.4
FAN25G1216 Fragaria x ananassa HOM05D003008 ORTHO05D003346 3.0e-11 74.3 190 28.9
FAN16G1739 Fragaria x ananassa HOM05D003008 ORTHO05D003346 3.9e-11 73.9 194 28.4
Lsat_1_v5_gn_8_128321 Lactuca sativa HOM05D003008 ORTHO05D003346 3.9e-11 73.9 102 40.2
SMO236G0116 Selaginella moellendorffii HOM05D003008 ORTHO05D003346 8.6e-11 72.8 53 60.4
Peaxi162Scf00701g00055 Petunia axillaris HOM05D003008 ORTHO05D003346 2.5e-10 71.2 131 35.1
Lsat_1_v5_gn_1_91780 Lactuca sativa HOM05D003008 ORTHO05D003346 4.3e-10 70.5 102 37.3


User provided reference genes

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