Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 5.4e-172 607.8 366 100.0
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-74 284.3 294 62.2
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 9.7e-73 278.1 290 61.7
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 6.3e-72 275.4 272 62.9
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 7.0e-71 271.9 291 59.8
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.0e-70 270.4 291 60.5
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 2.2e-69 266.9 284 59.2
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 5.5e-68 262.3 303 55.1
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 2.1e-67 260.4 294 57.1
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 3.4e-65 253.1 183 72.1
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 1.7e-64 250.8 304 55.3
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 1.7e-64 250.8 173 75.7
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 2.2e-64 250.4 173 74.0
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.8e-64 250.0 284 56.7
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 6.3e-64 248.8 187 69.5
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.4e-63 247.7 178 72.5
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.4e-63 247.7 173 74.0
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.4e-63 247.7 173 74.0
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.4e-63 247.7 285 57.9
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 1.4e-63 247.7 171 74.9
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 1.8e-63 247.3 173 73.4
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 3.1e-63 246.5 178 70.8
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 7.0e-63 245.4 166 76.5
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 7.0e-63 245.4 172 71.5
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.0e-62 243.8 168 72.0
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 4.5e-62 242.7 231 63.2
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 2.2e-61 240.4 300 51.0
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.9e-61 240.0 288 53.1
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 2.9e-61 240.0 173 71.1
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 2.9e-61 240.0 173 71.1
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 2.9e-61 240.0 173 71.1
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 3.8e-61 239.6 227 63.4
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 3.8e-61 239.6 295 52.5
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 5.0e-61 239.2 275 57.8
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 5.0e-61 239.2 173 74.0
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 6.5e-61 238.8 222 59.9
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 8.5e-61 238.4 168 70.8
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 1.1e-60 238.0 194 66.0
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 1.5e-60 237.7 168 73.8
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 2.5e-60 236.9 195 63.6
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 4.2e-60 236.1 291 52.9
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 4.2e-60 236.1 170 70.6
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 5.5e-60 235.7 174 69.5
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.1e-59 233.8 287 54.7
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 3.6e-59 233.0 168 69.0
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 4.7e-59 232.6 168 69.0
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 6.1e-59 232.3 170 69.4
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 8.0e-59 231.9 198 63.1
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 8.0e-59 231.9 191 62.3
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.0e-58 231.5 168 68.5
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.0e-58 231.5 168 68.5
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.0e-58 231.5 168 68.5
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.0e-58 231.5 173 68.2
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 1.0e-58 231.5 172 70.3
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.3e-58 230.3 173 68.2
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 2.3e-58 230.3 282 54.3
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 2.3e-58 230.3 186 65.6
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 4.0e-58 229.6 171 69.0
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 8.8e-58 228.4 225 60.4
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 2.0e-57 227.3 269 53.5
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.0e-57 227.3 169 71.6
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 4.4e-57 226.1 279 54.1
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 7.5e-57 225.3 267 51.3
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 7.5e-57 225.3 166 70.5
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 9.8e-57 224.9 189 64.0
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 2.8e-56 223.4 164 72.0
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 8.3e-56 221.9 188 64.4
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 1.4e-55 221.1 182 63.2
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.8e-55 220.7 194 61.9
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.4e-55 220.3 225 59.6
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 3.1e-55 219.9 199 61.8
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 3.1e-55 219.9 199 61.8
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 5.4e-55 219.2 161 68.9
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 7.0e-55 218.8 167 68.9
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.2e-54 218.0 166 69.3
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 1.2e-54 218.0 160 71.2
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 1.6e-54 217.6 157 71.3
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 3.5e-54 216.5 159 68.6
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 3.5e-54 216.5 228 54.4
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 7.8e-54 215.3 182 63.2
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 1.3e-53 214.5 185 63.8
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.7e-53 214.2 324 45.4
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 6.6e-53 212.2 177 65.5
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 5.6e-52 209.1 187 62.0
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 5.6e-52 209.1 157 71.3
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.2e-51 208.0 184 62.5
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.4e-50 204.5 212 61.8
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.2e-49 201.4 242 52.9
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 1.2e-49 201.4 172 59.9
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 1.5e-49 201.1 312 49.0
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 3.7e-48 196.4 171 61.4
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 4.9e-48 196.1 173 61.3
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 1.6e-46 191.0 172 58.1
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 4.6e-46 189.5 166 59.6
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 8.6e-45 185.3 168 60.7
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 2.8e-43 180.3 175 56.0
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 7.5e-41 172.2 132 72.0
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.3e-40 171.4 180 63.3
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 2.9e-40 170.2 139 66.2
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 2.9e-40 170.2 139 66.2
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 4.9e-40 169.5 124 69.4
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 6.4e-40 169.1 189 54.5
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 4.1e-39 166.4 148 61.5
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 3.6e-35 153.3 226 48.7
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 4.7e-35 152.9 124 66.9
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 1.4e-31 141.4 104 70.2
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 9.2e-31 138.7 119 63.0
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 3.6e-27 126.7 224 46.0
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 4.0e-26 123.2 168 43.5
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.4e-23 114.0 110 56.4
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 3.2e-23 113.6 171 39.2
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 7.3e-20 102.4 70 71.4
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 2.4e-18 97.4 105 55.2
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 6.4e-16 89.4 64 73.4
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 3.5e-14 83.6 135 41.5
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 4.8e-11 73.2 107 43.0
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 4.0e-10 70.1 61 60.7
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 6.9e-10 69.3 61 54.1
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 9.0e-10 68.9 171 42.1
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 1.5e-09 68.2 44 75.0
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.5e-09 68.2 40 85.0
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 3.4e-09 67.0 61 60.7
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.4e-09 67.0 44 77.3
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea HOM05D006300 ORTHO05D007623 1.1e-07 62.0 78 48.7
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 1.2e-06 58.5 171 39.8
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 6.0e-06 56.2 36 72.2


User provided reference genes

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