Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 5.6e-64 247.7 145 100.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.1e-54 216.9 144 77.1
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 5.2e-54 214.5 144 78.5
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 6.8e-54 214.2 144 78.5
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.8e-54 214.2 144 77.8
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.8e-54 214.2 144 77.8
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 6.8e-54 214.2 144 77.8
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 144 78.5
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.5e-53 213.0 144 77.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-53 213.0 145 74.5
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 2.6e-53 212.2 144 84.7
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 3.4e-53 211.8 144 76.4
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 4.4e-53 211.5 144 78.5
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 5.8e-53 211.1 144 76.4
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 5.8e-53 211.1 144 76.4
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.8e-53 211.1 144 76.4
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 5.8e-53 211.1 144 75.7
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.6e-53 210.7 144 77.1
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-53 210.3 143 77.6
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-53 210.3 143 77.6
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 9.9e-53 210.3 144 77.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.3e-52 209.9 145 76.6
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.3e-52 209.9 144 84.7
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.7e-52 209.5 144 76.4
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.2e-52 209.1 144 77.1
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 2.2e-52 209.1 144 75.7
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.2e-52 209.1 144 77.1
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.9e-52 208.8 143 76.9
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.8e-52 208.4 143 77.6
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 6.4e-52 207.6 144 76.4
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 6.4e-52 207.6 144 75.7
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.4e-52 207.6 145 74.5
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 8.4e-52 207.2 144 75.0
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 8.4e-52 207.2 144 75.7
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 8.4e-52 207.2 143 76.9
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.4e-51 206.5 143 75.5
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 1.9e-51 206.1 144 75.7
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.4e-51 205.7 144 75.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.4e-51 205.7 145 75.9
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.2e-51 205.3 144 88.2
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 3.2e-51 205.3 144 75.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 4.1e-51 204.9 144 72.9
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.1e-51 204.9 142 76.8
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.1e-51 204.9 142 75.4
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 4.1e-51 204.9 141 76.6
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 5.4e-51 204.5 145 75.2
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 9.2e-51 203.8 144 73.6
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 9.2e-51 203.8 144 75.7
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 9.2e-51 203.8 144 75.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.2e-50 203.4 144 75.7
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.6e-50 203.0 144 73.6
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.6e-50 203.0 144 75.0
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.1e-50 202.6 145 75.2
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 4.6e-50 201.4 144 72.2
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 7.8e-50 200.7 144 75.0
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 7.8e-50 200.7 144 74.3
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 7.8e-50 200.7 145 73.8
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.0e-49 200.3 144 75.0
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.0e-49 200.3 157 68.8
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.7e-49 199.5 145 73.8
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 86.0
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.7e-49 199.5 145 73.8
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.7e-49 199.5 145 73.8
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.3e-49 199.1 145 73.1
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.3e-49 199.1 144 74.3
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.3e-49 199.1 144 74.3
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-49 199.1 143 76.2
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-49 199.1 143 76.2
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-49 199.1 143 76.2
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.3e-49 199.1 145 73.1
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 3.9e-49 198.4 145 73.1
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 3.9e-49 198.4 145 73.1
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 3.9e-49 198.4 145 73.1
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.1e-49 198.0 145 73.1
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 5.1e-49 198.0 145 73.1
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 6.6e-49 197.6 145 73.1
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 8.7e-49 197.2 145 72.4
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.7e-49 197.2 145 72.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.7e-49 197.2 145 72.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.7e-49 197.2 145 72.4
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 72.4
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 143 75.5
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 71.7
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 1.9e-48 196.1 144 74.3
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.5e-48 195.7 144 75.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 3.3e-48 195.3 145 71.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 3.3e-48 195.3 134 77.6
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 3.3e-48 195.3 144 72.2
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 3.3e-48 195.3 144 72.9
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.3e-48 195.3 144 72.2
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.3e-48 194.9 145 72.4
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 4.3e-48 194.9 145 71.7
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 4.3e-48 194.9 145 71.7
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 4.3e-48 194.9 132 78.0
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 4.3e-48 194.9 144 72.9
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.3e-48 194.9 144 72.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.2e-47 193.4 143 75.5
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 2.1e-47 192.6 145 71.0
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.8e-47 192.2 132 78.0
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.8e-47 192.2 144 73.6
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.8e-47 192.2 144 73.6
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 3.6e-47 191.8 144 71.5
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.6e-47 191.8 144 73.6
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 4.7e-47 191.4 144 74.3
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 6.2e-47 191.0 145 70.3
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 8.1e-47 190.7 143 73.4
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.1e-46 190.3 145 71.0
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.4e-46 189.9 147 72.1
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 2.4e-46 189.1 144 72.9
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 2.4e-46 189.1 144 72.9
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 2.4e-46 189.1 144 72.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 4.0e-46 188.3 144 81.9
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.5e-45 186.4 130 76.9
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.5e-45 186.4 131 75.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.5e-45 186.4 144 72.2
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.0e-45 186.0 145 68.3
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 3.4e-45 185.3 159 65.4
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 4.4e-45 184.9 132 75.0
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 7.6e-45 184.1 134 73.1
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 9.9e-45 183.7 131 74.8
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 4.9e-44 181.4 146 79.5
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 8.4e-44 180.6 129 75.2
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.4e-44 180.6 132 85.6
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.1e-43 180.3 142 79.6
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 3.2e-43 178.7 143 70.6
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.2e-43 178.3 92 93.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 7.1e-43 177.6 180 60.0
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 9.3e-43 177.2 89 95.5
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.2e-42 176.8 151 67.5
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.6e-42 176.4 202 54.0
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.1e-42 176.0 143 67.8
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.0e-41 173.7 143 79.0
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 3.0e-41 172.2 86 95.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.0e-41 172.2 89 93.3
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 5.6e-40 167.9 145 64.8
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.3e-40 167.5 168 58.9
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.3e-39 166.8 152 71.1
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.1e-38 163.7 144 66.7
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.4e-38 162.5 136 70.6
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 6.9e-38 161.0 142 62.7
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-37 160.2 143 65.0
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.2e-37 160.2 121 72.7
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 3.4e-37 158.7 144 66.0
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 9.9e-37 157.1 90 83.3
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.4e-35 152.5 121 69.4
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 7.1e-35 151.0 139 64.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.6e-34 149.8 124 68.5
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 1.8e-33 146.4 123 83.7
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.1e-33 144.8 116 69.8
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.9e-32 142.9 121 67.8
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 5.6e-32 141.4 83 79.5
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 6.2e-31 137.9 77 83.1
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 5.3e-30 134.8 113 67.3
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 2.6e-29 132.5 134 54.5
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.9e-27 126.3 132 58.3
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 7.9e-26 120.9 116 60.3
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.8e-25 119.8 144 50.0
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.7e-25 117.9 63 87.3
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 4.3e-24 115.2 104 65.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 9.6e-24 114.0 99 68.7
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-23 113.2 132 53.8
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.7e-23 112.1 132 53.0
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.9e-22 107.8 119 55.5
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.9e-22 107.8 119 55.5
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 7.6e-21 104.4 99 65.7
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.3e-20 103.6 108 62.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.5e-19 99.4 82 63.4
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.0e-17 94.0 143 45.5
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 1.3e-17 93.6 48 87.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 7.4e-16 87.8 76 64.5
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-15 87.0 82 61.0
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 2.8e-15 85.9 81 61.7
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 5.3e-14 81.6 82 61.0
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 8.5e-12 74.3 77 58.4
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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