Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00216 Aquilegia oxysepala HOM05D003402 ORTHO05D038534 1.7e-91 339.3 172 100.0
PSO135G0058 Papaver somniferum HOM05D003402 ORTHO05D038534 6.5e-27 124.8 166 42.2
ATR0743G241 Amborella trichopoda HOM05D003402 ORTHO05D003939 2.7e-17 92.8 159 36.5
Gohir.D13G133300 Gossypium hirsutum HOM05D003402 ORTHO05D003939 2.7e-17 92.8 159 35.8
Duzib213G0004 Durio zibethinus HOM05D003402 ORTHO05D003939 6.1e-17 91.7 159 35.8
Cc07_g13980 Coffea canephora HOM05D003402 ORTHO05D003939 7.9e-17 91.3 159 36.5
COL.COLO4_07759 Corchorus olitorius HOM05D003402 ORTHO05D003939 1.0e-16 90.9 159 35.2
Gohir.A13G130156 Gossypium hirsutum HOM05D003402 ORTHO05D003939 1.0e-16 90.9 159 34.6
TPR.G17934 Trifolium pratense HOM05D003402 ORTHO05D003939 1.0e-16 90.9 159 35.2
Gohir.D05G386500 Gossypium hirsutum HOM05D003402 ORTHO05D003939 1.4e-16 90.5 159 35.8
MD03G1039400 Malus domestica HOM05D003402 ORTHO05D003939 1.4e-16 90.5 159 35.8
vmacro11627 Vaccinium macrocarpon HOM05D003402 ORTHO05D003939 1.4e-16 90.5 160 35.0
HPP92_006270 Vanilla planifolia HOM05D003402 ORTHO05D003939 1.4e-16 90.5 160 36.9
Duzib170G0574 Durio zibethinus HOM05D003402 ORTHO05D003939 1.8e-16 90.1 159 35.2
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 1.8e-16 90.1 159 35.8
Gohir.A04G003200 Gossypium hirsutum HOM05D003402 ORTHO05D003939 2.3e-16 89.7 159 35.8
Dinv41799 Davidia involucrata HOM05D003402 ORTHO05D003939 3.0e-16 89.4 160 35.0
Gorai.009G453200 Gossypium raimondii HOM05D003402 ORTHO05D003939 3.0e-16 89.4 159 35.2
Gorai.013G149600 Gossypium raimondii HOM05D003402 ORTHO05D003939 3.0e-16 89.4 159 34.6
arahy.Tifrunner.gnm1.ann1.YUWQ2H Arachis hypogaea HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 34.6
MSTRG.3724 Avicennia marina HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 34.6
Eucgr.K00301 Eucalyptus grandis HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 35.2
FvH4_5g31610 Fragaria vesca HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 35.8
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 35.8
MD11G1039900 Malus domestica HOM05D003402 ORTHO05D003939 3.9e-16 89.0 159 35.2
arahy.Tifrunner.gnm1.ann1.Z231WD Arachis hypogaea HOM05D003402 ORTHO05D003939 5.1e-16 88.6 159 34.6
FAN17G0134 Fragaria x ananassa HOM05D003402 ORTHO05D003939 5.1e-16 88.6 159 35.2
Prupe.6G032300 Prunus persica HOM05D003402 ORTHO05D003939 5.1e-16 88.6 159 35.8
RcHm_v2.0_Chr7g0227141 Rosa chinensis HOM05D003402 ORTHO05D003939 5.1e-16 88.6 159 35.2
FAN08G1169 Fragaria x ananassa HOM05D003402 ORTHO05D003939 6.7e-16 88.2 159 35.2
MBI10_g27408_MAGBIO Magnolia biondii HOM05D003402 ORTHO05D003939 6.7e-16 88.2 159 35.2
Os01g0788950 Oryza sativa ssp. japonica HOM05D003402 ORTHO05D003939 6.7e-16 88.2 159 36.5
Os03g0115200 Oryza sativa ssp. japonica HOM05D003402 ORTHO05D003939 6.7e-16 88.2 159 36.5
Zm00001eb151110 Zea mays HOM05D003402 ORTHO05D003939 6.7e-16 88.2 159 36.5
FAN03G3056 Fragaria x ananassa HOM05D003402 ORTHO05D003939 8.8e-16 87.8 159 34.6
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 8.8e-16 87.8 159 34.6
Manes.03G143100 Manihot esculenta HOM05D003402 ORTHO05D003939 8.8e-16 87.8 159 34.0
Prupe.6G031600 Prunus persica HOM05D003402 ORTHO05D003939 8.8e-16 87.8 159 35.8
HanXRQChr08g0232741 Helianthus annuus HOM05D003402 ORTHO05D003939 1.1e-15 87.4 159 34.6
Lsat_1_v5_gn_5_681 Lactuca sativa HOM05D003402 ORTHO05D003939 1.1e-15 87.4 159 35.2
Zm00001eb369690 Zea mays HOM05D003402 ORTHO05D003939 1.1e-15 87.4 159 36.5
Lj1P897T22 Lonicera japonica HOM05D003402 ORTHO05D003939 1.5e-15 87.0 159 34.6
Sed0014715 Sechium edule HOM05D003402 ORTHO05D003939 1.5e-15 87.0 159 34.6
Thecc.07G005500 Theobroma cacao HOM05D003402 ORTHO05D003939 1.5e-15 87.0 159 34.6
Dinv40893 Davidia involucrata HOM05D000015 ORTHO05D002536 2.0e-15 86.7 160 34.4
Glyma.18G072700 Glycine max HOM05D003402 ORTHO05D003939 2.0e-15 86.7 159 33.3
Nn2g11712 Nelumbo nucifera HOM05D003402 ORTHO05D003939 2.0e-15 86.7 159 34.6
Oeu017108.1 Olea europaea HOM05D003402 ORTHO05D003939 2.0e-15 86.7 159 35.2
Potri.001G469200 Populus trichocarpa HOM05D003402 ORTHO05D003939 2.0e-15 86.7 159 34.6
Sed0010383 Sechium edule HOM05D003402 ORTHO05D003939 2.0e-15 86.7 159 34.0
TAR627G1074 Trochodendron aralioides HOM05D003402 ORTHO05D003939 2.0e-15 86.7 160 34.4
Atru.chr1.1993 Acer truncatum HOM05D003402 ORTHO05D003939 2.6e-15 86.3 159 34.6
Glyma.18G072600 Glycine max HOM05D003402 ORTHO05D003939 2.6e-15 86.3 159 33.3
Phvul.006G060100 Phaseolus vulgaris HOM05D003402 ORTHO05D003939 2.6e-15 86.3 160 33.1
Rhsim09G0029600 Rhododendron simsii HOM05D003402 ORTHO05D003939 2.6e-15 86.3 160 33.8
Sed0017285 Sechium edule HOM05D003402 ORTHO05D003939 2.6e-15 86.3 159 34.0
ClCG01G000820 Citrullus lanatus HOM05D003402 ORTHO05D003939 3.3e-15 85.9 159 34.0
TAR629G1228 Trochodendron aralioides HOM05D003402 ORTHO05D003939 3.3e-15 85.9 160 33.1
Aqoxy4G03102 Aquilegia oxysepala HOM05D003402 ORTHO05D003939 4.4e-15 85.5 160 34.4
ClCG10G004100 Citrullus lanatus HOM05D003402 ORTHO05D003939 4.4e-15 85.5 159 34.0
CsaV3_5G000960 Cucumis sativus L. HOM05D003402 ORTHO05D003939 4.4e-15 85.5 159 34.0
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 4.4e-15 85.5 159 34.0
Hma1.2p1_0193F.1_g084090 Hydrangea macrophylla HOM05D003402 ORTHO05D003939 4.4e-15 85.5 160 34.4
Hma1.2p1_2995F.1_g331420 Hydrangea macrophylla HOM05D003402 ORTHO05D003939 4.4e-15 85.5 160 34.4
Mapoly0008s0090 Marchantia polymorpha HOM05D003402 ORTHO05D003939 4.4e-15 85.5 159 34.6
EL10Ac4g10262 Beta vulgaris HOM05D003402 ORTHO05D003939 5.7e-15 85.1 159 33.3
CSS0009706 Camellia sinensis var. sinensis HOM05D003402 ORTHO05D003939 5.7e-15 85.1 160 34.4
MELO3C014081.2 Cucumis melo HOM05D003402 ORTHO05D003939 5.7e-15 85.1 159 33.3
DCAR_013538 Daucus carota HOM05D003402 ORTHO05D003939 5.7e-15 85.1 159 35.2
PSO675G7280 Papaver somniferum HOM05D003402 ORTHO05D003939 5.7e-15 85.1 160 32.5
Sabra16G0318200 Salix brachista HOM05D003402 ORTHO05D003939 5.7e-15 85.1 159 34.6
EL10Ac4g10278 Beta vulgaris HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 33.3
CiPaw.14G096300 Carya illinoinensis HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 33.3
Ciclev10029250m.g Citrus clementina HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 34.0
Manes.05G206500 Manihot esculenta HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 34.0
Potri.011G166000 Populus trichocarpa HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 33.3
PGR083G2770 Punica granatum HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 34.0
PGSC0003DMG400030475 Solanum tuberosum HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 34.6
SGA_v2.0_scaffold45G17223 Striga asiatica HOM05D003402 ORTHO05D003939 7.4e-15 84.7 159 34.6
CANSAT01G1535 Cannabis sativa HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.6
AUR62026671 Chenopodium quinoa HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.0
AUR62035669 Chenopodium quinoa HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.0
Haze_09893 Corylus avellana HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 32.7
DCAR_023786 Daucus carota HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 35.2
Pp3c2_270 Physcomitrium patens HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.0
QL08p001639 Quercus lobata HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 33.3
Sc03g0011690 Simmondsia chinensis HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.0
unitig_748.g8474 Utricularia gibba HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 34.0
VMungo0540G0608 Vigna mungo HOM05D003402 ORTHO05D003939 9.7e-15 84.3 159 33.3
CAN.G874.67 Capsicum annuum HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 34.6
Cpa.g.sc19.128 Carica papaya HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 34.0
Ca_27956_v3 Cicer arietinum L. HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 34.0
MELO3C005848.2 Cucumis melo HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 33.3
Migut.K00808 Erythranthe guttata HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 32.7
Migut.K00809 Erythranthe guttata HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 33.3
Psat5g164680 Pisum sativum HOM05D003402 ORTHO05D003939 1.3e-14 84.0 159 34.0
Ca_07475_v3 Cicer arietinum L. HOM05D003402 ORTHO05D003939 1.7e-14 83.6 159 33.3
Ca_14849_v3 Cicer arietinum L. HOM05D003402 ORTHO05D003939 1.7e-14 83.6 159 34.0
Duzib268G1061 Durio zibethinus HOM05D003402 ORTHO05D003939 1.7e-14 83.6 161 34.8
Nitab4.5_0006644g0010 Nicotiana tabacum HOM05D003402 ORTHO05D003939 1.7e-14 83.6 159 35.2
SHI18619 Sapria himalayana HOM05D003402 ORTHO05D003939 1.7e-14 83.6 159 32.1
Sopen06g034020 Solanum pennellii HOM05D003402 ORTHO05D003939 1.7e-14 83.6 159 34.0
AUR62040577 Chenopodium quinoa HOM05D003402 ORTHO05D003939 2.2e-14 83.2 159 34.0
VMungo0251G3320 Vigna mungo HOM05D003402 ORTHO05D003939 2.2e-14 83.2 159 33.3
Cfa016938 Carpinus fangiana HOM05D003402 ORTHO05D003939 2.8e-14 82.8 159 32.1
Lalb_Chr15g0082451 Lupinus albus HOM05D003402 ORTHO05D003939 2.8e-14 82.8 159 33.3
Lalb_Chr20g0115311 Lupinus albus HOM05D003402 ORTHO05D003939 2.8e-14 82.8 159 34.0
Nn1g09837 Nelumbo nucifera HOM05D003402 ORTHO05D003939 2.8e-14 82.8 160 32.5
TWI73G0622 Tripterygium wilfordii HOM05D003402 ORTHO05D003939 2.8e-14 82.8 159 33.3
CANSAT01G1735 Cannabis sativa HOM05D003402 ORTHO05D003939 3.7e-14 82.4 159 33.3
CiPaw.11G208600 Carya illinoinensis HOM05D003402 ORTHO05D003939 3.7e-14 82.4 159 32.7
Phvul.002G190300 Phaseolus vulgaris HOM05D003402 ORTHO05D003939 3.7e-14 82.4 159 32.7
Lj5g0012042 Lotus japonicus HOM05D003402 ORTHO05D003939 4.8e-14 82.0 159 33.3
Medtr3g061130 Medicago truncatula HOM05D003402 ORTHO05D003939 4.8e-14 82.0 157 33.8
PGR042G2666 Punica granatum HOM05D003402 ORTHO05D003939 4.8e-14 82.0 158 33.5
unitig_0.g2650 Utricularia gibba HOM05D003402 ORTHO05D003939 6.3e-14 81.6 159 32.7
CsaV3_3G003950 Cucumis sativus L. HOM05D003402 ORTHO05D003939 8.2e-14 81.3 159 33.3
Lj6g0015324 Lotus japonicus HOM05D003402 ORTHO05D003939 8.2e-14 81.3 159 32.1
MSTRG.15682 Avicennia marina HOM05D003402 ORTHO05D003939 1.1e-13 80.9 159 32.1
SGA_v2.0_scaffold17G08096 Striga asiatica HOM05D003402 ORTHO05D003939 1.4e-13 80.5 158 30.4
SGA_v2.0_scaffold312G48272 Striga asiatica HOM05D003402 ORTHO05D003939 1.4e-13 80.5 158 30.4
Ciclev10032222m.g Citrus clementina HOM05D003402 ORTHO05D003939 2.4e-13 79.7 159 32.1
Nitab4.5_0012601g0010 Nicotiana tabacum HOM05D003402 ORTHO05D003939 2.4e-13 79.7 159 34.6
THA.LOC104801911 Tarenaya hassleriana HOM05D003402 ORTHO05D003939 2.4e-13 79.7 160 31.9
Thhalv10014450m.g Eutrema salsugineum HOM05D003402 ORTHO05D003939 3.1e-13 79.3 159 32.7
CARHR087880 Cardamine hirsuta HOM05D003402 ORTHO05D003939 4.1e-13 79.0 159 32.7
Sp1g41330 Schrenkiella parvula HOM05D003402 ORTHO05D003939 4.1e-13 79.0 159 32.7
SMO353G0217 Selaginella moellendorffii HOM05D003402 ORTHO05D003939 4.1e-13 79.0 159 32.7
SEGI_07786 Sequoiadendron giganteum HOM05D003402 ORTHO05D003939 4.1e-13 79.0 159 32.1
Ah.01g016790 Amaranthus hybridus HOM05D003402 ORTHO05D003939 5.3e-13 78.6 159 33.3
EL10Ac1g01597 Beta vulgaris HOM05D003402 ORTHO05D003939 5.3e-13 78.6 159 32.1
AagrBONN_evm.TU.Sc2ySwM_344.2223 Anthoceros agrestis HOM05D003402 ORTHO05D003939 6.9e-13 78.2 159 31.4
AagrBONN_evm.TU.Sc2ySwM_344.5330 Anthoceros agrestis HOM05D003402 ORTHO05D003939 6.9e-13 78.2 159 31.4
Peaxi162Scf00359g10124 Petunia axillaris HOM05D003402 ORTHO05D003939 6.9e-13 78.2 125 39.2
Thhalv10021508m.g Eutrema salsugineum HOM05D003402 ORTHO05D003939 9.1e-13 77.8 159 32.7
arahy.Tifrunner.gnm1.ann1.V7LA8U Arachis hypogaea HOM05D003402 ORTHO05D003939 1.2e-12 77.4 156 33.3
BcaC05g29198 Brassica carinata HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 32.1
A05p36350 Brassica napus HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 32.1
C05p54700 Brassica napus HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 32.1
BolC5t34140H Brassica oleracea HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 32.1
BraA05t22435Z Brassica rapa HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 32.1
Carub.0003s1264 Capsella rubella HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 31.4
Sp3g11460 Schrenkiella parvula HOM05D003402 ORTHO05D003939 1.2e-12 77.4 159 31.4
BcaB06g25476 Brassica carinata HOM05D003402 ORTHO05D003939 1.5e-12 77.0 159 32.1
THA.LOC104822711 Tarenaya hassleriana HOM05D003402 ORTHO05D003939 1.5e-12 77.0 159 32.1
AL3G25080 Arabidopsis lyrata HOM05D003402 ORTHO05D003939 2.0e-12 76.6 159 31.4
AT3G13230 Arabidopsis thaliana HOM05D003402 ORTHO05D003939 2.0e-12 76.6 159 31.4
CANSAT78G0394 Cannabis sativa HOM05D003402 ORTHO05D003939 2.6e-12 76.3 158 29.7
Aa31LG8G510 Aethionema arabicum HOM05D003402 ORTHO05D003939 3.4e-12 75.9 159 30.8
Cre12.g549700 Chlamydomonas reinhardtii HOM05D003402 ORTHO05D003939 5.9e-12 75.1 160 29.4
MBI10_g27411_MAGBIO Magnolia biondii HOM05D003402 ORTHO05D003939 7.7e-12 74.7 118 39.0
Sed0006897 Sechium edule HOM05D001876 ORTHO05D002002 7.7e-12 74.7 158 33.5
CBR_g49013 Chara braunii HOM05D003402 ORTHO05D003939 1.0e-11 74.3 156 31.4
Sed0019842 Sechium edule HOM05D003402 ORTHO05D003939 1.0e-11 74.3 161 34.8
A05p17340 Brassica napus HOM05D003402 ORTHO05D003939 1.3e-11 73.9 160 32.5
BcaB02g10802 Brassica carinata HOM05D003402 ORTHO05D003939 1.1e-10 70.9 159 32.1
Ah.16g107980 Amaranthus hybridus HOM05D003402 ORTHO05D003939 1.9e-10 70.1 169 32.0
MCO11G345 Micromonas commoda HOM05D003402 ORTHO05D003939 2.5e-10 69.7 159 32.1
BcaB02g10801 Brassica carinata HOM05D003402 ORTHO05D003939 1.2e-09 67.4 153 31.4
AUR62043266 Chenopodium quinoa HOM05D003402 ORTHO05D003939 1.0e-08 64.3 100 38.0
PRCOL_00004610 Prasinoderma coloniale HOM05D003402 ORTHO05D003939 3.0e-08 62.8 156 26.3
AUR62017905 Chenopodium quinoa HOM05D003402 ORTHO05D003939 6.7e-08 61.6 160 30.0
AUR62033193 Chenopodium quinoa HOM05D003402 ORTHO05D003939 2.0e-07 60.1 100 36.0
Hund02357 Selenicereus undatus HOM05D003402 ORTHO05D003939 2.0e-07 60.1 165 28.5
EL10Ac4g07749 Beta vulgaris HOM05D003402 ORTHO05D003939 4.4e-07 58.9 161 29.2
Haze_26506 Corylus avellana HOM05D003402 ORTHO05D003939 7.4e-07 58.2 152 24.3
Hund02372 Selenicereus undatus HOM05D003402 ORTHO05D003939 1.3e-06 57.4 165 28.5
CSS0032042 Camellia sinensis var. sinensis HOM05D003402 ORTHO05D003939 1.7e-06 57.0 125 33.6


User provided reference genes

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