Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 9.7e-52 206.5 99 100.0
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 2.8e-38 161.8 99 75.8
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 2.3e-37 158.7 99 74.7
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.5e-36 156.0 99 72.7
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 1.3e-35 152.9 95 75.8
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 3.1e-34 148.3 94 71.3
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 2.7e-33 145.2 94 69.1
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 5.9e-33 144.1 94 70.2
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 7.8e-33 143.7 94 70.2
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 7.8e-33 143.7 94 70.2
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 2.3e-32 142.1 94 69.1
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.3e-32 142.1 95 69.5
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 2.9e-32 141.7 94 70.2
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 5.0e-32 141.0 95 69.5
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 6.6e-32 140.6 96 68.8
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 8.6e-32 140.2 94 69.1
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.9e-31 139.0 96 67.7
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.9e-31 139.0 96 67.7
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.9e-31 139.0 96 67.7
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 3.3e-31 138.3 95 66.3
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 5.6e-31 137.5 95 67.4
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.6e-30 136.0 92 68.5
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 2.1e-30 135.6 94 67.0
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 4.7e-30 134.4 97 67.0
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 67.0
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 8.0e-30 133.7 92 68.5
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 8.0e-30 133.7 79 78.5
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 1.4e-29 132.9 99 64.6
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.4e-29 132.9 94 68.1
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.8e-29 132.5 101 63.4
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 4.0e-29 131.3 95 65.3
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.0e-29 131.3 93 65.6
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 5.2e-29 131.0 99 62.6
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 5.2e-29 131.0 99 62.6
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 5.2e-29 131.0 97 67.0
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 6.8e-29 130.6 97 66.0
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 6.8e-29 130.6 92 65.2
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 1.2e-28 129.8 92 66.3
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.5e-28 129.4 99 61.6
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 2.0e-28 129.0 94 66.0
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.4e-28 128.3 96 64.6
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 4.4e-28 127.9 94 63.8
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 4.4e-28 127.9 92 65.2
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 4.4e-28 127.9 92 65.2
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 5.7e-28 127.5 98 61.2
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 9.8e-28 126.7 87 66.7
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 9.8e-28 126.7 92 64.1
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 1.3e-27 126.3 92 64.1
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 1.7e-27 125.9 94 61.7
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 1.7e-27 125.9 92 64.1
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 2.2e-27 125.6 96 62.5
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 2.2e-27 125.6 96 62.5
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 2.2e-27 125.6 96 62.5
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 2.2e-27 125.6 96 61.5
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 3.7e-27 124.8 92 63.0
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 3.7e-27 124.8 87 65.5
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 3.7e-27 124.8 87 65.5
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 4.9e-27 124.4 94 62.8
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 4.9e-27 124.4 92 60.9
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 6.4e-27 124.0 94 62.8
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 6.4e-27 124.0 94 62.8
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 6.4e-27 124.0 94 62.8
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 1.1e-26 123.2 96 61.5
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 1.4e-26 122.9 94 62.8
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 1.8e-26 122.5 96 63.5
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 5.4e-26 120.9 87 64.4
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.2e-25 119.8 99 58.6
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 2.0e-25 119.0 144 44.4
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 3.5e-25 118.2 96 58.3
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 4.6e-25 117.9 96 58.3
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 1.3e-24 116.3 134 47.8
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.7e-24 115.9 90 60.0
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 2.3e-24 115.5 96 56.2
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 2.3e-24 115.5 96 57.3
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 5.0e-24 114.4 94 57.4
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 5.0e-24 114.4 86 65.1
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 6.6e-24 114.0 96 56.2
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 8.6e-24 113.6 96 56.2
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 8.6e-24 113.6 90 57.8
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 8.6e-24 113.6 91 58.2
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 4.3e-23 111.3 87 63.2
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 5.6e-23 110.9 96 54.2
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 9.5e-23 110.2 97 59.8
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 1.6e-22 109.4 96 58.3
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 1.6e-22 109.4 69 71.0
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 4.7e-22 107.8 103 53.4
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 3.1e-21 105.1 69 69.6
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 2.6e-20 102.1 96 55.2
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 3.4e-20 101.7 99 57.6
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 7.5e-20 100.5 69 66.7
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 9.8e-20 100.1 165 38.8
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 5.4e-18 94.4 66 66.7
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 1.2e-17 93.2 63 68.3
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 7.8e-17 90.5 67 64.2
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 8.6e-16 87.0 67 61.2
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.3e-15 84.7 65 63.1
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 9.5e-15 83.6 70 60.0
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 2.1e-14 82.4 93 47.3
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 2.1e-14 82.4 68 54.4
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 3.6e-14 81.6 49 69.4
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 3.1e-13 78.6 49 69.4
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 5.8e-12 74.3 54 61.1
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 6.6e-08 60.8 47 61.7
Ca_08439_v3 Cicer arietinum L. HOM05D007428 ORTHO05D009308 4.7e-06 54.7 68 44.1
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 6.2e-06 54.3 55 49.1


User provided reference genes

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