Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy74s001 Aquilegia oxysepala HOM05D005293 ORTHO05D006764 6.3e-80 300.8 165 100.0
Aqoxy7G02580 Aquilegia oxysepala HOM05D005293 ORTHO05D006764 1.5e-76 289.7 164 97.0
TAR362G0639 Trochodendron aralioides HOM05D005293 ORTHO05D006764 5.7e-65 251.1 146 87.0
Haze_04033 Corylus avellana HOM05D005293 ORTHO05D006764 2.4e-63 245.7 144 85.4
Dinv30900 Davidia involucrata HOM05D005293 ORTHO05D006764 3.2e-63 245.4 146 84.9
Cfa006727 Carpinus fangiana HOM05D005293 ORTHO05D006764 4.1e-63 245.0 144 85.4
Migut.N00939 Erythranthe guttata HOM05D005293 ORTHO05D006764 1.2e-62 243.4 146 84.9
Lj5C327G4 Lonicera japonica HOM05D005293 ORTHO05D006764 1.2e-62 243.4 146 84.9
Actinidia16868 Actinidia chinensis HOM05D005293 ORTHO05D006764 1.6e-62 243.0 146 84.9
CiPaw.07G030400 Carya illinoinensis HOM05D005293 ORTHO05D006764 1.6e-62 243.0 141 85.8
Lsat_1_v5_gn_8_116220 Lactuca sativa HOM05D005293 ORTHO05D006764 1.6e-62 243.0 139 87.8
Ca_09301_v3 Cicer arietinum L. HOM05D005293 ORTHO05D006764 2.0e-62 242.7 144 86.1
QL03p014223 Quercus lobata HOM05D005293 ORTHO05D006764 3.5e-62 241.9 141 85.1
Sed0019289 Sechium edule HOM05D005293 ORTHO05D006764 3.5e-62 241.9 136 88.2
ATR0693G200 Amborella trichopoda HOM05D005293 ORTHO05D006764 1.0e-61 240.4 138 85.5
Cc02_g35200 Coffea canephora HOM05D005293 ORTHO05D006764 1.0e-61 240.4 147 83.7
Glyma.19G228100 Glycine max HOM05D005293 ORTHO05D006764 1.0e-61 240.4 144 84.7
Nn3g21747 Nelumbo nucifera HOM05D005293 ORTHO05D006764 1.0e-61 240.4 146 82.9
Cpa.g.sc48.172 Carica papaya HOM05D005293 ORTHO05D006764 1.3e-61 240.0 145 82.1
HanXRQChr09g0258691 Helianthus annuus HOM05D005293 ORTHO05D006764 1.3e-61 240.0 143 84.6
BcaC04g22064 Brassica carinata HOM05D005293 ORTHO05D006764 2.3e-61 239.2 136 86.0
A09p19050 Brassica napus HOM05D005293 ORTHO05D006764 2.3e-61 239.2 136 86.0
C09p23880 Brassica napus HOM05D005293 ORTHO05D006764 2.3e-61 239.2 136 86.0
BolC9t55314H Brassica oleracea HOM05D005293 ORTHO05D006764 2.3e-61 239.2 136 86.0
Medtr7g112140 Medicago truncatula HOM05D005293 ORTHO05D006764 2.3e-61 239.2 144 84.7
PGR031G3792 Punica granatum HOM05D005293 ORTHO05D006764 3.9e-61 238.4 144 81.9
BraA09t37523Z Brassica rapa HOM05D005293 ORTHO05D006764 5.0e-61 238.0 136 85.3
Sp2g06270 Schrenkiella parvula HOM05D005293 ORTHO05D006764 5.0e-61 238.0 136 86.0
Manes.09G177500 Manihot esculenta HOM05D005293 ORTHO05D006764 6.6e-61 237.7 149 79.9
MSTRG.27933 Avicennia marina HOM05D005293 ORTHO05D006764 8.6e-61 237.3 146 84.2
CsaV3_1G037900 Cucumis sativus L. HOM05D005293 ORTHO05D006764 8.6e-61 237.3 141 83.7
Hma1.2p1_0008F-1.1_g005500 Hydrangea macrophylla HOM05D005293 ORTHO05D006764 8.6e-61 237.3 146 83.6
Lj1g0018442 Lotus japonicus HOM05D005293 ORTHO05D006764 1.1e-60 236.9 146 81.5
Thhalv10023228m.g Eutrema salsugineum HOM05D005293 ORTHO05D006764 2.5e-60 235.7 136 85.3
TWI56G0054 Tripterygium wilfordii HOM05D005293 ORTHO05D006764 2.5e-60 235.7 148 79.1
TPR.G1667 Trifolium pratense HOM05D005293 ORTHO05D006764 3.3e-60 235.3 144 83.3
CARHR055040 Cardamine hirsuta HOM05D005293 ORTHO05D006764 4.3e-60 235.0 140 85.0
Prupe.6G311900 Prunus persica HOM05D005293 ORTHO05D006764 4.3e-60 235.0 145 81.4
arahy.Tifrunner.gnm1.ann1.BVXC9K Arachis hypogaea HOM05D005293 ORTHO05D006764 5.6e-60 234.6 134 87.3
Duzib106G1789 Durio zibethinus HOM05D005293 ORTHO05D006764 5.6e-60 234.6 147 81.6
MD12G1204700 Malus domestica HOM05D005293 ORTHO05D006764 7.3e-60 234.2 147 82.3
THA.LOC104820617 Tarenaya hassleriana HOM05D005293 ORTHO05D006764 7.3e-60 234.2 132 87.1
PSO478G4822 Papaver somniferum HOM05D005293 ORTHO05D006764 9.5e-60 233.8 144 81.9
CANSAT54G1875 Cannabis sativa HOM05D005293 ORTHO05D006764 1.2e-59 233.4 147 79.6
Thecc.05G324300 Theobroma cacao HOM05D005293 ORTHO05D006764 1.2e-59 233.4 147 81.6
AL1G66250 Arabidopsis lyrata HOM05D005293 ORTHO05D006764 2.1e-59 232.6 136 84.6
CSS0026167 Camellia sinensis var. sinensis HOM05D005293 ORTHO05D006764 2.1e-59 232.6 146 80.8
Potri.013G007800 Populus trichocarpa HOM05D005293 ORTHO05D006764 2.1e-59 232.6 141 82.3
Carub.0002s0755 Capsella rubella HOM05D005293 ORTHO05D006764 2.8e-59 232.3 136 84.6
PSO782G5414 Papaver somniferum HOM05D005293 ORTHO05D006764 2.8e-59 232.3 144 81.2
BcaB07g31127 Brassica carinata HOM05D005293 ORTHO05D006764 3.6e-59 231.9 136 84.6
Aa31LG2G11430 Aethionema arabicum HOM05D005293 ORTHO05D006764 4.7e-59 231.5 134 85.1
AT1G56500 Arabidopsis thaliana HOM05D005293 ORTHO05D006764 1.0e-58 230.3 136 83.1
Phvul.001G224700 Phaseolus vulgaris HOM05D005293 ORTHO05D006764 1.0e-58 230.3 144 79.9
Sc16g0009090 Simmondsia chinensis HOM05D005293 ORTHO05D006764 1.0e-58 230.3 135 83.7
Ah.06g196020 Amaranthus hybridus HOM05D005293 ORTHO05D006764 1.4e-58 229.9 140 81.4
Gohir.D13G115500 Gossypium hirsutum HOM05D005293 ORTHO05D006764 1.8e-58 229.6 147 80.3
Gorai.013G130100 Gossypium raimondii HOM05D005293 ORTHO05D006764 1.8e-58 229.6 147 80.3
Sabra13G0006700 Salix brachista HOM05D005293 ORTHO05D006764 1.8e-58 229.6 141 80.9
Atru.chr2.352 Acer truncatum HOM05D005293 ORTHO05D006764 2.3e-58 229.2 136 83.8
Psat3g012680 Pisum sativum HOM05D005293 ORTHO05D006764 2.3e-58 229.2 144 80.6
COL.COLO4_05541 Corchorus olitorius HOM05D005293 ORTHO05D006764 4.0e-58 228.4 147 79.6
ECA232G4555 Erigeron canadensis HOM05D005293 ORTHO05D006764 4.0e-58 228.4 134 86.6
vmacro01574 Vaccinium macrocarpon HOM05D005293 ORTHO05D006764 4.0e-58 228.4 146 82.9
Solyc01g100650.3 Solanum lycopersicum HOM05D005293 ORTHO05D006764 5.2e-58 228.0 144 79.9
Eucgr.H03302 Eucalyptus grandis HOM05D005293 ORTHO05D006764 6.8e-58 227.6 142 81.0
FvH4_6g07620 Fragaria vesca HOM05D005293 ORTHO05D006764 6.8e-58 227.6 147 77.6
Os03g0311300 Oryza sativa ssp. japonica HOM05D005293 ORTHO05D006764 6.8e-58 227.6 141 80.1
CAN.G1076.24 Capsicum annuum HOM05D005293 ORTHO05D006764 8.9e-58 227.3 144 80.6
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 8.9e-58 227.3 145 80.0
FAN09G2780 Fragaria x ananassa HOM05D005293 ORTHO05D006764 8.9e-58 227.3 147 77.6
unitig_746.g26883 Utricularia gibba HOM05D005293 ORTHO05D006764 8.9e-58 227.3 143 79.7
Hund21867 Selenicereus undatus HOM05D005293 ORTHO05D006764 1.2e-57 226.9 141 81.6
Gohir.A13G112600 Gossypium hirsutum HOM05D005293 ORTHO05D006764 2.0e-57 226.1 147 78.9
Lalb_Chr04g0260421 Lupinus albus HOM05D005293 ORTHO05D006764 2.0e-57 226.1 146 79.5
DCAR_029342 Daucus carota HOM05D005293 ORTHO05D006764 4.4e-57 224.9 145 77.9
Nitab4.5_0001338g0090 Nicotiana tabacum HOM05D005293 ORTHO05D006764 4.4e-57 224.9 133 84.2
AUR62006736 Chenopodium quinoa HOM05D005293 ORTHO05D006764 5.8e-57 224.6 140 80.7
FAN14G3496 Fragaria x ananassa HOM05D005293 ORTHO05D006764 5.8e-57 224.6 147 76.9
RcHm_v2.0_Chr3g0457281 Rosa chinensis HOM05D005293 ORTHO05D006764 5.8e-57 224.6 147 76.9
Nitab4.5_0004525g0070 Nicotiana tabacum HOM05D005293 ORTHO05D006764 9.8e-57 223.8 146 78.1
EL10Ac4g09472 Beta vulgaris HOM05D005293 ORTHO05D006764 6.4e-56 221.1 134 81.3
Zm00001eb014950 Zea mays HOM05D005293 ORTHO05D006764 4.1e-55 218.4 129 85.3
Zm00001eb014960 Zea mays HOM05D005293 ORTHO05D006764 4.1e-55 218.4 129 85.3
Oeu016565.1 Olea europaea HOM05D005293 ORTHO05D006764 5.4e-55 218.0 123 87.8
MBI19_g03258_MAGBIO Magnolia biondii HOM05D005293 ORTHO05D006764 1.2e-54 216.9 144 72.9
GSVIVG01031253001 Vitis vinifera HOM05D005293 ORTHO05D006764 3.0e-53 212.2 123 86.2
HPP92_013515 Vanilla planifolia HOM05D005293 ORTHO05D006764 5.0e-53 211.5 146 75.3
SEGI_20624 Sequoiadendron giganteum HOM05D005293 ORTHO05D006764 4.4e-49 198.4 135 71.9
ClCG03G017750 Citrullus lanatus HOM05D005293 ORTHO05D006764 4.1e-47 191.8 141 72.3
MELO3C015255.2 Cucumis melo HOM05D005293 ORTHO05D006764 7.1e-47 191.0 141 71.6
SMO358G0750 Selaginella moellendorffii HOM05D005293 ORTHO05D006764 1.6e-46 189.9 127 74.0
AagrBONN_evm.TU.Sc2ySwM_228.2939 Anthoceros agrestis HOM05D005293 ORTHO05D006764 2.1e-46 189.5 140 68.6
FAN05G3958 Fragaria x ananassa HOM05D005293 ORTHO05D006764 2.7e-46 189.1 147 67.3
Peaxi162Scf01061g00134 Petunia axillaris HOM05D005293 ORTHO05D006764 2.7e-46 189.1 146 68.5
Pp3c22_14790 Physcomitrium patens HOM05D005293 ORTHO05D006764 1.1e-44 183.7 144 64.6
CSS0034972 Camellia sinensis var. sinensis HOM05D005293 ORTHO05D006764 1.2e-43 180.3 114 78.9
Mapoly0010s0206 Marchantia polymorpha HOM05D005293 ORTHO05D006764 6.2e-43 177.9 136 68.4
Pp3c21_18980 Physcomitrium patens HOM05D005293 ORTHO05D006764 2.6e-41 172.6 127 64.6
Rhsim11G0095900 Rhododendron simsii HOM05D005293 ORTHO05D006764 9.2e-39 164.1 149 65.1
AUR62000381 Chenopodium quinoa HOM05D005293 ORTHO05D006764 7.8e-38 161.0 143 62.9
Glyma.03G230900 Glycine max HOM05D005293 ORTHO05D006764 5.2e-34 148.3 85 85.9
CBR_g26291 Chara braunii HOM05D005293 ORTHO05D006764 3.3e-28 129.0 132 55.3
PGSC0003DMG402002797 Solanum tuberosum HOM05D005293 ORTHO05D006764 1.6e-22 110.2 71 76.1
Ah.06g196040 Amaranthus hybridus HOM05D005293 ORTHO05D006764 5.1e-21 105.1 121 51.2
Ah.06g196090 Amaranthus hybridus HOM05D005293 ORTHO05D006764 2.9e-16 89.4 62 74.2
TPR.G33040 Trifolium pratense HOM05D002952 ORTHO05D003361 1.9e-07 60.1 33 90.9
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 9.3e-07 57.8 35 80.0


User provided reference genes

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