Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 5.4e-175 617.5 292 100.0
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 9.7e-124 447.2 292 70.5
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 5.0e-120 434.9 282 70.6
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.4e-117 426.8 284 69.4
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-116 423.7 285 68.8
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 5.7e-116 421.4 289 66.8
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.2e-113 413.7 298 64.4
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 2.6e-113 412.5 289 64.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 3.4e-113 412.1 283 67.1
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 7.7e-113 411.0 292 65.4
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 2.2e-112 409.5 290 63.4
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.6e-110 403.3 285 65.3
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.0e-109 400.6 278 65.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.3e-109 399.4 285 64.9
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.1e-108 397.1 287 61.7
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 3.3e-108 395.6 289 63.7
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 3.3e-108 395.6 289 62.3
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 6.3e-107 391.3 289 61.6
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.7e-104 383.3 289 61.6
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.8e-104 382.1 294 58.2
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.1e-103 380.6 289 58.1
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.5e-103 380.2 284 60.9
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 4.2e-103 378.6 275 60.7
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.2e-103 377.9 292 58.9
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 9.4e-103 377.5 275 61.1
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.2e-102 377.1 285 59.6
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.2e-102 377.1 289 60.2
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.6e-102 376.7 289 59.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.1e-102 376.3 282 61.0
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 2.7e-102 375.9 293 57.7
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 2.7e-102 375.9 289 59.9
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 6.1e-102 374.8 274 62.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.8e-101 373.2 291 58.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 2.3e-101 372.9 285 59.3
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 2.3e-101 372.9 291 58.8
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 2.3e-101 372.9 291 58.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 6.7e-101 371.3 288 61.5
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 2.6e-100 369.4 289 57.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 7.5e-100 367.9 268 60.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 9.7e-100 367.5 272 61.8
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.7e-99 366.7 295 57.3
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.7e-99 365.5 289 59.2
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.8e-99 365.2 286 57.7
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 4.1e-98 362.1 281 59.1
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 5.3e-98 361.7 285 57.2
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.9e-95 353.2 241 67.6
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 5.5e-95 351.7 234 67.5
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 3.6e-94 349.0 291 58.4
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 6.1e-94 348.2 290 54.8
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 1.4e-93 347.1 289 55.7
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 3.1e-90 335.9 275 58.9
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 7.0e-90 334.7 266 57.1
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 4.5e-89 332.0 231 65.4
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.3e-88 330.5 279 53.8
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.7e-88 330.1 275 56.0
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.0e-88 328.6 275 56.4
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 4.2e-87 325.5 289 54.7
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 6.3e-83 311.6 270 57.0
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 7.7e-81 304.7 273 50.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.8e-77 293.5 315 47.3
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.0e-76 290.0 240 56.7
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 3.7e-75 285.8 212 59.9
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.6e-71 271.9 223 55.6
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.2e-70 270.8 285 47.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.8e-69 266.9 279 45.2
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.3e-69 266.5 220 56.4
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 9.8e-68 261.2 276 43.8
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.7e-67 260.4 214 56.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.4e-66 256.5 276 41.3
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.1e-61 241.1 237 51.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.1e-58 231.1 210 49.0
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 6.0e-57 225.3 364 35.2
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 5.6e-55 218.8 223 48.0
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 4.4e-52 209.1 229 47.6
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 8.1e-38 161.8 105 66.7
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.9e-34 150.6 154 48.7
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 6.2e-30 135.6 102 61.8
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 5.3e-29 132.5 369 26.3
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.1e-23 114.8 64 73.4
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.1e-17 94.0 176 34.1
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.1e-17 94.0 62 69.4
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 2.2e-06 57.4 53 49.1
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 8.2e-06 55.5 44 52.3


User provided reference genes

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