Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02933 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.5e-113 412.9 210 100.0
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.4e-95 353.2 207 87.9
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.0e-50 204.1 197 56.3
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 5.3e-47 191.8 201 55.7
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 4.5e-46 188.7 186 57.0
PSO210G4815 Papaver somniferum HOM05D002270 ORTHO05D002866 2.1e-43 179.9 177 56.5
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 3.3e-41 172.6 202 51.0
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.1e-40 169.9 207 47.3
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 3.1e-39 166.0 193 46.1
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 9.0e-39 164.5 193 45.6
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.5e-38 163.7 206 45.6
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 2.6e-38 162.9 194 47.9
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.4e-38 162.5 205 46.3
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 2.2e-37 159.8 193 46.6
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.4e-36 157.1 176 50.6
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.6e-35 152.1 203 45.3
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 6.7e-34 148.3 209 42.1
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 2.5e-33 146.4 199 43.2
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 4.3e-33 145.6 199 42.7
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 7.4e-33 144.8 190 44.7
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.3e-32 144.1 179 48.0
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.3e-32 144.1 207 38.6
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.3e-32 144.1 209 40.7
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 2.4e-31 139.8 210 41.4
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.0e-30 136.7 183 42.6
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 4.5e-30 135.6 208 42.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 5.0e-29 132.1 198 41.9
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.5e-29 131.7 196 39.3
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 6.5e-29 131.7 200 41.5
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.9e-28 130.2 196 38.8
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.9e-28 130.2 202 43.1
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.2e-28 129.4 203 42.4
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.5e-28 128.6 195 42.1
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 5.5e-28 128.6 176 46.6
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.2e-27 127.5 160 41.9
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.6e-27 127.1 164 41.5
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.6e-27 127.1 201 40.3
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.6e-27 127.1 190 36.8
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 2.7e-27 126.3 166 44.0
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 7.9e-27 124.8 194 39.7
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 7.9e-27 124.8 199 38.2
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.3e-26 124.0 164 40.9
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 2.3e-26 123.2 196 38.3
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.9e-26 122.5 209 39.7
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 6.7e-26 121.7 194 39.2
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 8.7e-26 121.3 188 43.6
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 8.7e-26 121.3 196 35.7
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.1e-25 120.9 195 40.5
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.1e-25 120.9 199 40.7
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.5e-25 120.6 195 40.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.5e-25 120.6 200 37.0
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.9e-25 120.2 198 38.9
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.9e-25 120.2 195 43.6
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 2.2e-24 116.7 193 39.9
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 2.2e-24 116.7 195 41.5
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 2.8e-24 116.3 196 34.7
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.8e-24 116.3 201 37.3
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 3.7e-24 115.9 190 40.0
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.8e-23 113.6 168 44.0
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.4e-23 113.2 168 44.0
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 3.1e-23 112.8 168 42.9
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 5.3e-23 112.1 168 42.9
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 6.9e-23 111.7 196 39.8
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.2e-22 110.9 207 40.1
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 1.2e-22 110.9 188 41.0
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 4.5e-22 109.0 195 38.5
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 1.0e-21 107.8 206 38.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.3e-21 107.5 185 38.4
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.3e-21 107.5 187 41.2
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.3e-21 107.5 192 36.5
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.7e-21 107.1 168 39.9
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.9e-21 106.3 207 39.6
PGSC0003DMG400021645 Solanum tuberosum HOM05D002270 ORTHO05D002866 3.8e-21 105.9 135 46.7
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 5.0e-21 105.5 146 45.2
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.1e-20 104.4 188 39.9
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 1.4e-20 104.0 198 35.9
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 1.4e-20 104.0 196 37.8
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 2.5e-20 103.2 197 37.1
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.5e-20 103.2 178 38.2
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.5e-20 103.2 197 37.1
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 3.2e-20 102.8 165 40.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 4.2e-20 102.4 200 37.5
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.6e-19 100.5 179 38.5
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.7e-19 99.8 205 36.6
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.6e-19 99.4 200 36.5
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 6.1e-19 98.6 179 38.5
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 7.9e-19 98.2 193 37.3
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.0e-18 97.8 169 39.6
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.0e-18 97.8 169 39.6
TPR.G10921 Trifolium pratense HOM05D002270 ORTHO05D002866 1.0e-18 97.8 170 41.8
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 3.0e-18 96.3 201 37.3
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 3.0e-18 96.3 202 34.2
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 5.1e-18 95.5 171 37.4
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 8.8e-18 94.7 202 35.6
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.0e-17 93.6 200 34.5
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 2.5e-17 93.2 175 40.0
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 2.5e-17 93.2 179 35.2
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 4.3e-17 92.4 202 34.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 4.3e-17 92.4 174 37.9
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 7.4e-17 91.7 209 36.8
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 2.2e-16 90.1 153 41.2
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 4.8e-16 89.0 162 34.6
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 4.1e-15 85.9 146 34.9
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 5.5e-12 75.5 159 34.0
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 3.7e-08 62.8 103 40.8
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.4e-07 60.1 167 31.7
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 4.1e-07 59.3 173 31.8
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 4.1e-07 59.3 173 31.8
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 7.7e-06 55.1 129 31.0


User provided reference genes

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