Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 2.7e-58 228.8 148 100.0
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 5.5e-43 177.9 148 81.1
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 2.8e-42 175.6 148 80.4
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 4.7e-42 174.9 148 80.4
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 6.8e-41 171.0 148 75.7
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 8.6e-36 154.1 144 75.0
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 8.6e-36 154.1 148 64.9
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 4.3e-35 151.8 144 74.3
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 5.6e-35 151.4 143 73.4
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 1.2e-34 150.2 142 69.7
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 3.6e-34 148.7 133 72.2
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.7e-34 148.3 144 70.1
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 8.0e-34 147.5 142 53.5
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 1.8e-33 146.4 131 74.0
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 3.0e-33 145.6 131 75.6
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.0e-33 145.2 144 68.8
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 8.9e-33 144.1 138 71.7
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 1.2e-32 143.7 140 72.1
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 1.5e-32 143.3 138 71.7
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 2.0e-32 142.9 141 71.6
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 2.0e-32 142.9 144 71.5
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 2.0e-32 142.9 140 71.4
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 3.4e-32 142.1 137 70.1
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 4.4e-32 141.7 140 60.0
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.4e-32 141.7 148 70.9
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 4.4e-32 141.7 130 74.6
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 5.8e-32 141.4 136 72.1
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 7.5e-32 141.0 148 67.6
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 7.5e-32 141.0 131 71.0
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 1.3e-31 140.2 130 76.2
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.7e-31 139.8 148 69.6
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 2.2e-31 139.4 137 69.3
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 2.9e-31 139.0 136 70.6
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 4.9e-31 138.3 137 66.4
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 4.9e-31 138.3 131 73.3
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 4.9e-31 138.3 138 69.6
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 6.4e-31 137.9 139 68.3
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 8.3e-31 137.5 141 71.6
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 8.3e-31 137.5 131 71.8
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 8.3e-31 137.5 138 68.1
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 1.1e-30 137.1 137 68.6
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 1.4e-30 136.7 137 70.8
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.4e-30 136.7 137 65.7
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.4e-30 136.7 130 73.8
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.4e-30 136.7 131 71.8
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.9e-30 136.3 130 74.6
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 2.4e-30 136.0 136 61.8
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 4.1e-30 135.2 88 70.5
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 5.4e-30 134.8 134 67.2
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 5.4e-30 134.8 130 74.6
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 7.0e-30 134.4 132 68.9
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 9.2e-30 134.0 130 70.0
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 9.2e-30 134.0 141 58.9
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.2e-29 133.7 132 72.7
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 1.6e-29 133.3 138 69.6
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 2.0e-29 132.9 132 68.2
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 2.7e-29 132.5 121 78.5
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 2.7e-29 132.5 130 73.1
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 3.5e-29 132.1 122 74.6
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 6.0e-29 131.3 132 67.4
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 1.3e-28 130.2 131 68.7
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 1.3e-28 130.2 132 68.2
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 1.7e-28 129.8 140 65.7
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 1.7e-28 129.8 136 52.2
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 2.3e-28 129.4 138 64.5
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 5.0e-28 128.3 140 62.9
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 6.6e-28 127.9 135 68.9
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 8.6e-28 127.5 132 71.2
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 2.5e-27 125.9 137 63.5
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 2.5e-27 125.9 132 65.9
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 3.3e-27 125.6 118 72.9
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 5.6e-27 124.8 138 64.5
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 7.3e-27 124.4 132 72.0
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 4.7e-26 121.7 129 72.1
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 6.2e-26 121.3 88 68.2
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 8.0e-26 120.9 133 60.9
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 1.8e-25 119.8 136 66.9
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 1.8e-25 119.8 138 62.3
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 1.8e-25 119.8 89 64.0
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 6.8e-25 117.9 124 46.0
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 2.0e-24 116.3 142 53.5
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 4.4e-24 115.2 136 60.3
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 5.8e-24 114.8 86 58.1
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 7.5e-24 114.4 127 65.4
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 7.5e-24 114.4 136 61.8
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 9.8e-24 114.0 134 62.7
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 9.8e-24 114.0 136 61.0
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 1.7e-23 113.2 132 62.1
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 1.7e-23 113.2 136 61.8
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 1.7e-23 113.2 136 61.0
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.9e-23 111.7 132 61.4
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.9e-23 111.7 132 61.4
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 4.9e-23 111.7 137 60.6
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 4.9e-23 111.7 132 61.4
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 1.1e-22 110.5 132 59.8
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 1.4e-22 110.2 150 56.0
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 1.9e-22 109.8 113 72.6
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 2.4e-22 109.4 136 59.6
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 5.4e-22 108.2 129 60.5
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 1.2e-21 107.1 136 63.2
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 1.2e-21 107.1 122 49.2
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 3.5e-21 105.5 143 55.2
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.3e-20 103.6 143 39.9
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 3.0e-20 102.4 98 79.6
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 8.6e-20 100.9 141 55.3
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 8.6e-20 100.9 141 55.3
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 4.3e-19 98.6 79 53.2
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 9.5e-19 97.4 133 39.1
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.1e-17 94.0 127 58.3
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 8.9e-17 90.9 122 51.6
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 8.9e-17 90.9 127 54.3
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 2.0e-16 89.7 142 52.8
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.3e-15 87.0 96 62.5
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 6.4e-15 84.7 140 42.1
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 2.4e-14 82.8 130 50.0
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 1.0e-12 77.4 70 51.4
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.9e-11 73.2 93 44.1
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 2.1e-10 69.7 118 32.2
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 2.1e-10 69.7 118 32.2
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 2.1e-10 69.7 118 32.2
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 6.2e-10 68.2 134 28.4
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 1.4e-09 67.0 118 30.5
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 1.4e-09 67.0 118 30.5
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 1.4e-09 67.0 135 28.1
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 1.8e-09 66.6 123 47.2
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.2e-08 63.9 96 34.4
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.4e-08 62.0 97 48.5
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 5.8e-08 61.6 58 48.3
Hma1.2p1_1820F.1_g304180 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 3.8e-07 58.9 66 86.4
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 4.9e-07 58.5 73 38.4


User provided reference genes

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