Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 7.4e-42 173.3 80 100.0
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 7.2e-29 130.2 133 53.4
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 8.2e-17 90.1 94 45.7
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 4.1e-16 87.8 118 42.4
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 4.1e-16 87.8 118 42.4
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 5.3e-16 87.4 116 42.2
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 7.0e-16 87.0 118 41.5
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 2.6e-15 85.1 117 39.3
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 2.6e-15 85.1 119 39.5
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.3e-14 82.8 117 39.3
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 5.0e-14 80.9 118 38.1
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 5.0e-14 80.9 110 39.1
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 8.5e-14 80.1 110 39.1
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 1.1e-13 79.7 118 39.0
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 1.9e-13 79.0 117 38.5
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 4.2e-13 77.8 108 39.8
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 5.5e-13 77.4 119 34.5
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 9.4e-13 76.6 109 38.5
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 9.4e-13 76.6 109 38.5
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 9.4e-13 76.6 108 38.9
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 2.7e-12 75.1 115 33.9
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.7e-12 75.1 109 37.6
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 3.6e-12 74.7 108 37.0
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 4.7e-12 74.3 108 38.9
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 4.7e-12 74.3 108 38.9
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 4.7e-12 74.3 117 34.2
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 6.1e-12 73.9 123 32.5
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 6.1e-12 73.9 108 38.9
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 6.1e-12 73.9 108 38.9
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 6.1e-12 73.9 108 38.9
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 6.1e-12 73.9 108 38.9
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 8.0e-12 73.6 108 38.0
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 8.0e-12 73.6 114 34.2
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 8.0e-12 73.6 122 33.6
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 1.0e-11 73.2 108 36.1
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 1.0e-11 73.2 108 36.1
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.0e-11 73.2 114 34.2
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 1.4e-11 72.8 117 35.0
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 1.8e-11 72.4 108 36.1
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.8e-11 72.4 117 33.3
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 1.8e-11 72.4 119 36.1
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 3.0e-11 71.6 109 34.9
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 4.0e-11 71.2 109 35.8
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 4.0e-11 71.2 111 36.9
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 4.0e-11 71.2 117 35.0
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 5.2e-11 70.9 110 36.4
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 6.7e-11 70.5 108 37.0
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 8.8e-11 70.1 108 37.0
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 8.8e-11 70.1 108 35.2
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 1.5e-10 69.3 110 37.3
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 1.5e-10 69.3 115 32.2
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 1.5e-10 69.3 108 34.3
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 1.5e-10 69.3 117 33.3
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 1.5e-10 69.3 117 33.3
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 1.5e-10 69.3 104 37.5
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.0e-10 68.9 76 42.1
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 2.0e-10 68.9 111 35.1
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 2.0e-10 68.9 126 32.5
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 2.6e-10 68.6 108 36.1
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 2.6e-10 68.6 110 36.4
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 2.6e-10 68.6 108 36.1
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 3.3e-10 68.2 108 35.2
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 4.4e-10 67.8 108 35.2
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 4.4e-10 67.8 108 34.3
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 4.4e-10 67.8 108 34.3
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 4.4e-10 67.8 101 36.6
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 5.7e-10 67.4 108 34.3
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 7.5e-10 67.0 58 50.0
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 7.5e-10 67.0 58 50.0
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 7.5e-10 67.0 123 31.7
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 9.7e-10 66.6 60 51.7
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 9.7e-10 66.6 117 32.5
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 9.7e-10 66.6 113 35.4
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 1.3e-09 66.2 111 35.1
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 1.7e-09 65.9 126 31.7
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 1.7e-09 65.9 112 33.0
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 1.7e-09 65.9 108 33.3
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 3.7e-09 64.7 124 29.8
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 3.7e-09 64.7 117 31.6
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 3.7e-09 64.7 105 36.2
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 3.7e-09 64.7 104 36.5
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 4.8e-09 64.3 108 33.3
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 6.3e-09 63.9 115 33.9
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 1.1e-08 63.2 123 28.5
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 1.8e-08 62.4 108 33.3
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.8e-08 62.4 45 62.2
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.1e-08 61.6 104 36.5
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.1e-08 61.6 104 36.5
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 3.1e-08 61.6 104 36.5
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 3.1e-08 61.6 108 31.5
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 9.1e-08 60.1 58 50.0
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 2.7e-07 58.5 105 34.3
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 2.7e-07 58.5 109 32.1
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 3.5e-07 58.2 126 28.6
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 5.9e-07 57.4 109 29.4
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 1.3e-06 56.2 77 35.1
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.2e-06 55.5 77 35.1
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 2.2e-06 55.5 77 35.1
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 3.8e-06 54.7 108 30.6
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 6.5e-06 53.9 44 54.5
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 6.5e-06 53.9 123 27.6
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 6.5e-06 53.9 106 31.1
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 8.5e-06 53.5 109 31.2


User provided reference genes

Program Settings