Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.1e-311 1072.4 539 100.0
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.8e-182 642.1 563 60.4
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.9e-181 639.8 564 60.6
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 1.2e-180 637.1 545 62.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.1e-173 614.0 548 58.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 7.1e-173 611.3 554 57.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 3.5e-172 609.0 564 58.3
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.3e-171 607.1 527 61.3
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 4.3e-170 602.1 518 61.6
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 2.6e-167 592.8 511 60.1
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 4.5e-167 592.0 508 60.4
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.7e-164 582.8 547 58.0
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 7.9e-164 581.3 528 58.5
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.3e-163 579.7 525 58.3
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.9e-163 578.9 506 59.1
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 7.4e-162 574.7 506 58.5
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 2.8e-161 572.8 516 57.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.7e-161 572.4 532 57.1
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 3.7e-161 572.4 533 55.5
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.1e-160 568.9 535 55.5
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 5.3e-160 568.5 553 55.5
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 6.9e-160 568.2 597 54.1
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.2e-159 567.4 504 58.1
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.5e-159 567.0 551 55.2
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.6e-159 566.2 546 56.0
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 4.5e-159 565.5 539 55.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 5.9e-159 565.1 504 58.7
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 2.2e-158 563.1 537 56.1
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 3.8e-158 562.4 527 55.4
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 3.8e-158 562.4 545 54.5
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 6.5e-158 561.6 539 55.3
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 6.5e-158 561.6 545 54.1
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 2.5e-157 559.7 504 56.9
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 7.2e-157 558.1 508 58.9
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 7.2e-157 558.1 520 58.1
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 7.2e-157 558.1 627 52.8
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 2.7e-156 556.2 536 57.3
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 7.9e-156 554.7 561 54.4
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.4e-155 553.9 506 57.1
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.3e-155 553.1 527 56.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 3.9e-155 552.4 519 56.6
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 1.1e-154 550.8 575 53.0
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 9.7e-154 547.7 504 56.3
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 9.7e-154 547.7 586 51.5
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 2.8e-153 546.2 537 54.7
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 7.0e-152 541.6 537 55.3
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.2e-151 540.8 520 56.0
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 2.6e-151 539.7 530 55.3
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.3e-150 537.3 464 59.5
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 3.8e-150 535.8 505 57.0
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 8.5e-150 534.6 506 55.5
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 8.5e-150 534.6 549 52.8
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.1e-149 534.3 507 56.0
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.4e-149 533.9 498 55.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 3.2e-149 532.7 540 52.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.1e-148 530.0 412 65.0
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 2.7e-148 529.6 509 54.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 6.1e-148 528.5 528 54.2
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.0e-147 527.7 528 54.2
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 2.0e-146 523.5 525 54.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.6e-146 523.1 499 54.7
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 4.4e-146 522.3 499 55.1
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 5.7e-146 521.9 523 53.9
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 9.7e-146 521.2 496 55.2
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 9.7e-146 521.2 499 55.7
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-145 520.0 538 53.0
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 2.2e-145 520.0 538 53.0
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 2.2e-145 520.0 498 53.8
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 2.2e-145 520.0 473 56.0
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 2.2e-145 520.0 519 55.7
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.4e-144 517.3 520 52.5
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.8e-144 516.9 511 54.4
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 2.4e-144 516.5 513 53.6
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.1e-144 514.6 561 50.4
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.6e-143 513.1 522 53.6
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 4.5e-143 512.3 539 52.9
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 4.5e-143 512.3 499 55.5
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 3.8e-142 509.2 530 51.9
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 7.2e-141 505.0 432 60.9
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 4.7e-140 502.3 522 51.9
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.0e-139 501.1 498 53.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 3.7e-137 492.7 500 55.2
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 8.3e-137 491.5 518 50.6
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.4e-136 490.0 499 53.3
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 5.3e-136 488.8 448 57.6
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-135 487.6 532 51.1
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.2e-133 479.6 526 51.1
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 8.8e-131 471.5 462 53.2
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.8e-129 465.7 538 49.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 5.4e-128 462.2 534 50.9
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 9.1e-128 461.5 554 45.8
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 4.0e-123 446.0 386 62.4
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 3.7e-121 439.5 375 60.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 9.2e-120 434.9 528 47.2
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 7.3e-117 425.2 529 45.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 7.3e-117 425.2 554 43.7
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 4.7e-116 422.5 254 79.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.3e-113 414.5 330 65.5
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.2e-111 407.9 530 44.5
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-108 397.5 306 63.7
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.1e-92 344.0 427 48.2
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 5.8e-90 335.9 286 62.9
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.1e-88 331.6 211 74.9
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 8.1e-84 315.5 263 63.9
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 9.0e-83 312.0 395 45.8
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.5e-82 311.2 262 56.1
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.1e-77 295.0 456 37.9
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-69 267.7 246 57.7
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 2.7e-55 220.7 305 41.6
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 2.4e-51 207.6 493 29.8
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.6e-47 194.9 130 73.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-40 171.8 208 45.2
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.6e-39 167.2 183 44.8
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.7e-33 148.3 125 60.8
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.5e-29 135.2 223 38.6
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 3.3e-29 134.0 186 40.9
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.6e-26 124.4 145 44.1
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 2.9e-25 120.9 105 61.0
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 8.0e-23 112.8 143 39.9
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 8.0e-23 112.8 176 37.5
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 5.2e-22 110.2 313 28.1
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.2e-21 109.0 199 35.2
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.5e-21 108.6 249 34.1
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.0e-17 95.9 54 83.3
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.1e-16 92.4 156 41.7
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.1e-15 86.7 105 49.5
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 1.7e-12 78.6 65 63.1
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 2.2e-12 78.2 39 84.6
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.2e-12 78.2 128 40.6
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.8e-12 77.8 137 32.1
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.3e-08 64.3 111 37.8
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 2.1e-07 61.6 38 71.1


User provided reference genes

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