Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 9.7e-186 653.3 320 100.0
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 1.3e-113 413.7 295 66.1
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 1.2e-111 407.1 292 66.4
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 2.1e-111 406.4 289 65.4
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 7.9e-111 404.4 290 65.9
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 1.3e-110 403.7 294 65.6
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.8e-110 403.3 304 63.8
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 3.0e-110 402.5 290 66.2
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 1.1e-109 400.6 289 65.7
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.9e-109 399.8 289 64.7
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.1e-108 396.4 289 64.4
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.1e-107 392.5 289 65.4
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 4.0e-107 392.1 290 65.5
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 4.0e-107 392.1 289 62.6
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 6.9e-107 391.3 291 66.3
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 6.9e-107 391.3 288 64.9
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 9.0e-107 391.0 306 62.4
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 9.0e-107 391.0 289 65.1
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 2.0e-106 389.8 305 62.3
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 7.6e-106 387.9 288 64.9
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.2e-105 386.3 289 63.0
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 3.8e-105 385.6 295 64.1
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 4.9e-105 385.2 285 63.5
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 4.9e-105 385.2 289 62.3
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.9e-105 385.2 306 61.8
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 6.5e-105 384.8 289 64.0
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 1.1e-104 384.0 290 62.8
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 1.1e-104 384.0 284 64.1
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 1.9e-104 383.3 289 62.3
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 3.2e-104 382.5 289 64.0
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 9.3e-104 380.9 295 63.4
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 1.2e-103 380.6 301 61.1
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.2e-103 380.6 287 63.1
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.6e-103 380.2 289 62.3
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.6e-103 380.2 284 63.4
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 2.1e-103 379.8 287 63.1
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.1e-103 379.8 288 63.2
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 3.5e-103 379.0 284 62.7
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 4.6e-103 378.6 290 64.5
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 6.0e-103 378.3 287 63.1
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 7.9e-103 377.9 284 62.3
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.0e-102 377.5 284 62.0
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.8e-102 376.7 287 63.4
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.8e-102 376.7 289 62.3
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 2.3e-102 376.3 291 60.5
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 3.9e-102 375.6 284 62.7
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 5.1e-102 375.2 287 63.4
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 5.1e-102 375.2 289 60.9
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 6.7e-102 374.8 288 62.8
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 6.7e-102 374.8 289 61.6
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 6.7e-102 374.8 284 63.4
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 1.1e-101 374.0 287 62.4
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 1.1e-101 374.0 284 62.0
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 1.9e-101 373.2 296 59.1
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.5e-101 372.9 289 62.3
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 9.6e-101 370.9 360 54.2
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.6e-100 370.2 288 62.5
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 3.7e-100 369.0 287 61.7
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 3.7e-100 369.0 289 62.3
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 6.3e-100 368.2 290 61.4
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 8.2e-100 367.9 288 62.5
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 8.2e-100 367.9 288 62.5
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.8e-99 366.7 288 59.7
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 9.0e-99 364.4 284 61.3
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 2.0e-98 363.2 288 61.1
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 2.0e-98 363.2 332 54.5
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 2.6e-98 362.8 294 59.9
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 3.4e-98 362.5 289 62.3
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 4.5e-98 362.1 288 61.8
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.5e-96 356.3 291 59.1
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 2.5e-96 356.3 315 58.1
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 4.2e-96 355.5 291 59.8
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 1.2e-95 354.0 313 56.2
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.2e-95 354.0 295 59.3
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.1e-95 353.2 291 58.4
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 7.9e-95 351.3 321 57.0
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 4.8e-92 342.0 289 57.1
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 8.2e-92 341.3 303 56.1
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 9.1e-91 337.8 316 52.8
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 1.5e-90 337.0 288 58.0
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.9e-89 332.8 286 57.7
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 3.6e-87 325.9 248 62.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.5e-85 320.5 287 56.1
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 2.0e-85 320.1 289 54.3
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 4.8e-84 315.5 295 53.9
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.1e-83 314.3 286 55.2
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 3.1e-83 312.8 248 59.3
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.3e-81 307.4 271 57.6
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 4.2e-80 302.4 282 55.7
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.9e-78 295.8 263 56.3
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.4e-77 292.4 235 61.3
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 8.2e-76 288.1 290 53.1
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 4.7e-71 272.3 200 62.5
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.6e-69 266.5 301 44.2
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 6.3e-68 261.9 310 42.9
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 5.0e-65 252.3 336 41.7
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 4.4e-61 239.2 292 44.2
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.3e-52 211.1 226 45.6
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 5.9e-50 202.2 153 62.1
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.7e-49 200.7 144 63.2
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 8.6e-49 198.4 164 56.1
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 4.0e-46 189.5 281 38.8
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.7e-44 184.1 136 60.3
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 3.6e-39 166.4 360 31.7
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 4.1e-35 152.9 298 36.2
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.5e-32 144.4 143 50.3
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 6.2e-31 139.0 167 44.3
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 1.2e-21 108.2 67 70.1
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 2.9e-20 103.6 81 59.3
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 9.2e-19 98.6 99 48.5
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 4.9e-12 76.3 149 33.6
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 7.3e-08 62.4 61 52.5
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 7.3e-08 62.4 61 52.5
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 7.3e-08 62.4 162 32.1
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 2.8e-07 60.5 183 30.1
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 3.6e-07 60.1 178 32.0
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 1.1e-06 58.5 177 32.8
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.1e-06 58.5 159 34.0
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 1.4e-06 58.2 178 29.8
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 1.8e-06 57.8 179 31.3
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 1.8e-06 57.8 170 29.4
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 1.8e-06 57.8 149 30.9
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 2.4e-06 57.4 167 31.7
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.0e-06 56.6 148 29.7


User provided reference genes

Program Settings