Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 0.0e+00 1157.9 564 100.0
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.6e-242 842.0 568 73.4
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.8e-235 819.3 568 72.7
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 5.3e-235 817.8 566 72.8
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 7.1e-232 807.4 527 76.1
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 6.0e-231 804.3 588 69.6
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 3.9e-230 801.6 508 75.8
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 7.4e-229 797.3 531 72.9
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 3.7e-228 795.0 561 69.3
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 2.4e-227 792.3 533 72.0
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.4e-227 792.3 563 70.5
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 3.1e-227 792.0 535 73.3
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 6.9e-227 790.8 562 70.5
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 4.5e-226 788.1 559 69.9
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 4.5e-226 788.1 495 75.4
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 4.5e-226 788.1 481 77.3
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.8e-226 787.7 565 70.1
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 5.8e-226 787.7 485 77.5
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 1.1e-224 783.5 537 71.7
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.4e-224 783.1 528 72.0
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.4e-224 783.1 476 77.9
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.9e-224 782.7 498 74.9
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 4.2e-224 781.6 472 77.8
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 7.1e-224 780.8 472 76.9
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.6e-223 778.1 564 68.6
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 6.0e-223 777.7 562 68.3
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.0e-222 776.9 485 75.9
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 1.8e-222 776.2 524 72.7
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 3.9e-222 775.0 568 68.7
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 8.7e-222 773.9 536 72.2
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 8.7e-222 773.9 472 76.9
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 7.4e-221 770.8 519 72.1
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.3e-220 770.0 472 76.5
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-220 770.0 472 76.5
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 1.3e-220 770.0 564 67.9
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.6e-220 769.6 485 76.1
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.1e-220 769.2 472 76.3
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 2.8e-220 768.8 485 74.6
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.8e-220 768.8 564 67.6
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 3.7e-220 768.5 562 67.3
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 4.8e-220 768.1 480 76.2
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 6.2e-220 767.7 470 77.2
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 6.2e-220 767.7 467 77.5
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 8.2e-220 767.3 508 72.8
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.1e-219 766.9 506 72.7
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.8e-219 766.1 563 69.3
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.1e-219 765.4 472 76.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 5.3e-219 764.6 466 77.5
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 6.9e-219 764.2 470 76.6
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.2e-218 763.5 548 69.0
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.4e-218 761.9 559 67.1
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 4.5e-218 761.5 643 62.7
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 5.8e-218 761.1 472 76.1
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 7.6e-218 760.8 534 70.8
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 7.6e-218 760.8 527 71.5
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.3e-217 760.0 471 75.6
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.3e-217 760.0 478 74.7
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.3e-217 760.0 557 67.1
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 2.2e-217 759.2 535 70.7
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 2.5e-216 755.7 538 69.1
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.5e-216 754.6 485 74.4
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 9.3e-216 753.8 514 70.6
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 3.5e-215 751.9 542 68.8
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 3.5e-215 751.9 475 74.5
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 7.9e-215 750.7 559 68.0
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 7.9e-215 750.7 469 76.1
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.8e-214 749.6 576 65.8
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 3.0e-214 748.8 538 68.2
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 3.9e-214 748.4 640 60.5
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 6.7e-214 747.7 485 74.2
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 1.1e-213 746.9 496 72.2
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.5e-213 746.5 567 66.8
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.5e-213 746.5 562 67.6
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.9e-213 746.1 557 67.3
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.9e-213 746.1 472 75.0
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 3.3e-213 745.3 567 67.0
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 7.4e-213 744.2 540 69.1
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 9.7e-213 743.8 466 75.3
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.6e-212 743.0 467 74.9
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.6e-212 743.0 493 71.4
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 2.2e-212 742.7 514 71.6
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 2.2e-212 742.7 502 71.1
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.8e-212 742.3 514 72.0
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 3.7e-212 741.9 514 71.6
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.1e-211 738.8 472 75.4
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.5e-210 734.9 452 76.8
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 5.9e-210 734.6 564 66.5
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 7.6e-210 734.2 520 69.0
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 3.8e-209 731.9 483 71.8
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 8.5e-209 730.7 648 59.3
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 5.5e-208 728.0 508 68.7
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 5.5e-208 728.0 511 70.5
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.2e-207 726.9 528 68.8
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.1e-207 726.1 453 76.2
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 9.1e-203 710.7 513 67.8
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 7.7e-202 707.6 443 74.5
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.9e-200 703.0 539 65.3
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.6e-199 699.9 550 64.4
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.7e-199 699.1 485 69.7
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 6.1e-199 698.0 561 64.7
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.4e-194 682.2 428 74.8
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.2e-192 675.6 428 74.3
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 2.1e-191 672.9 465 68.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.0e-190 669.1 478 70.3
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 4.7e-183 645.2 448 68.3
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.8e-182 643.3 471 62.6
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.4e-179 633.6 465 64.3
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 3.5e-178 629.0 428 69.9
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 5.9e-178 628.2 471 64.1
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.0e-177 627.5 471 62.2
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 8.0e-175 617.8 471 61.4
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.2e-173 614.0 469 63.5
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 9.1e-171 604.4 454 62.3
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 1.6e-170 603.6 475 64.2
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.8e-169 599.0 468 60.7
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.7e-167 592.0 365 76.4
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.0e-166 590.9 467 60.8
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.4e-166 590.5 545 54.7
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 6.8e-166 588.2 483 59.2
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 8.3e-156 554.7 457 61.5
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.4e-148 528.5 483 55.3
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.4e-139 498.8 401 62.8
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 3.9e-137 492.7 352 67.3
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 7.8e-122 441.8 316 68.7
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 9.6e-120 434.9 428 50.7
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.8e-118 430.6 515 46.2
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 2.6e-117 426.8 255 76.5
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 1.8e-113 414.1 368 60.1
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.1e-103 380.6 261 67.8
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.1e-94 351.7 331 57.1
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-88 330.1 267 58.4
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 2.2e-87 327.4 259 66.8
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 5.3e-86 322.8 214 66.8
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.2e-77 295.0 240 60.0
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 9.7e-64 248.8 191 68.6
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.0e-52 212.2 162 61.7
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 9.5e-51 205.7 151 67.5
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 1.5e-43 181.8 182 54.4
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.2e-41 173.3 120 70.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 1.5e-40 171.8 183 55.2
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 3.4e-40 170.6 100 83.0
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.0e-36 159.1 91 74.7
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 3.4e-32 144.1 122 59.8
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.5e-29 134.0 133 52.6
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 1.2e-16 92.4 120 48.3
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.4e-14 85.5 60 58.3
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.9e-11 75.1 56 64.3
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 2.5e-11 74.7 57 70.2
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 5.6e-11 73.6 48 75.0
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 5.6e-11 73.6 48 75.0
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 7.6e-08 63.2 67 58.2
ATR1171G001 Amborella trichopoda HOM05D004653 ORTHO05D019566 1.1e-06 59.3 76 51.3


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