Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 0.0e+00 1137.5 664 100.0
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.4e-234 815.8 563 74.8
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 4.0e-226 788.5 556 73.4
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.2e-222 776.9 546 74.9
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.5e-220 769.2 567 70.5
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.8e-213 746.5 564 68.4
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 7.1e-207 724.5 560 68.6
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 7.1e-207 724.5 551 68.6
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 1.1e-204 717.2 565 67.3
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 6.2e-203 711.4 521 70.6
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 5.0e-200 701.8 478 74.1
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 2.7e-198 696.0 548 67.0
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.9e-196 689.9 511 70.1
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 2.5e-196 689.5 482 72.2
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 5.7e-196 688.3 546 66.5
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 1.3e-195 687.2 464 73.3
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 2.8e-195 686.0 564 64.5
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 8.2e-195 684.5 540 66.5
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 2.4e-194 682.9 512 68.6
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 9.0e-194 681.0 478 71.5
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.2e-193 680.6 536 65.7
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.5e-193 680.2 486 70.8
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 3.4e-193 679.1 483 72.0
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 1.0e-192 677.6 485 70.5
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 8.5e-192 674.5 433 76.7
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 2.5e-191 672.9 532 66.9
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 7.2e-191 671.4 538 66.2
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 1.4e-189 667.2 535 65.8
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 2.3e-189 666.4 542 65.5
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.0e-189 666.0 494 68.8
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 6.7e-189 664.8 482 71.6
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 2.0e-188 663.3 570 63.0
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.5e-188 662.9 401 80.3
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.7e-188 661.8 483 68.7
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.2e-187 659.8 494 68.2
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.2e-187 659.8 478 69.5
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.8e-187 659.4 478 69.0
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 2.8e-187 659.4 536 64.2
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 4.8e-187 658.7 440 76.8
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 8.2e-187 657.9 532 65.4
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.4e-186 656.4 491 68.0
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 9.1e-186 654.4 494 68.0
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 4.5e-185 652.1 625 58.7
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 5.9e-185 651.7 486 68.7
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.0e-184 651.0 547 64.2
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 3.8e-184 649.0 521 65.6
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 5.0e-184 648.7 581 60.4
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-183 646.4 509 66.6
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 1.6e-182 643.7 496 66.3
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 3.6e-182 642.5 391 80.3
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 4.7e-182 642.1 497 66.0
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 7.9e-182 641.3 496 65.9
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.4e-181 640.6 496 66.5
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 8.8e-181 637.9 496 66.3
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.6e-180 636.3 479 67.4
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 7.4e-180 634.8 537 62.9
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-178 630.9 503 65.8
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 9.1e-178 627.9 486 67.7
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 7.7e-177 624.8 472 67.8
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.9e-176 622.9 512 64.5
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 8.0e-174 614.8 461 69.2
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 4.0e-173 612.5 529 62.6
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 9.7e-172 607.8 458 68.6
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 1.3e-171 607.4 484 66.1
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 1.7e-171 607.1 538 59.1
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 2.8e-171 606.3 471 65.8
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.4e-170 603.2 479 64.9
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 3.1e-170 602.8 491 63.3
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 4.1e-170 602.4 500 63.8
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 7.7e-169 598.2 442 67.9
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 1.9e-167 593.6 439 67.7
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 2.1e-166 590.1 480 64.6
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 3.0e-165 586.3 417 70.5
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 5.2e-165 585.5 488 62.5
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 2.8e-163 579.7 483 63.4
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 1.7e-160 570.5 480 62.9
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.8e-160 569.3 417 68.8
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-159 567.8 417 68.6
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 4.2e-159 565.8 522 58.4
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 5.5e-159 565.5 489 61.6
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.6e-158 563.9 420 66.7
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 5.2e-157 558.9 420 68.3
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.6e-153 547.4 418 67.9
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 2.7e-153 546.6 431 68.4
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 1.6e-150 537.3 468 61.5
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 1.3e-147 527.7 475 60.0
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 1.3e-144 517.7 359 71.3
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 3.0e-144 516.5 473 58.4
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 4.3e-143 512.7 531 54.8
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 1.8e-141 507.3 498 56.0
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 2.3e-141 506.9 453 59.8
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 7.5e-140 501.9 485 57.1
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.2e-139 500.4 483 56.9
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 3.5e-137 493.0 398 63.8
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 3.0e-136 490.0 486 56.0
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 2.8e-134 483.4 361 68.1
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 7.5e-132 475.3 425 56.7
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 1.6e-126 457.6 288 78.1
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 7.6e-124 448.7 485 49.3
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 1.7e-115 421.0 443 53.5
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 8.4e-115 418.7 453 52.3
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 4.2e-114 416.4 686 39.8
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 7.8e-113 412.1 354 61.3
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 6.2e-110 402.5 487 51.3
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 3.5e-105 386.7 310 66.5
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.1e-103 381.7 322 61.8
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.9e-98 364.4 363 58.4
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 1.8e-93 347.8 342 53.2
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.3e-88 331.6 301 58.8
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.3e-88 331.6 411 44.5
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 3.0e-88 330.5 195 82.1
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 6.7e-88 329.3 334 54.2
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.6e-81 308.1 327 52.9
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 2.8e-78 297.4 209 69.4
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 3.8e-75 287.0 322 50.0
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 6.5e-75 286.2 270 56.3
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 7.2e-74 282.7 164 82.3
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 4.4e-71 273.5 217 64.1
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 1.3e-70 271.9 162 80.9
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 2.2e-70 271.2 171 77.8
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 4.5e-68 263.5 164 75.6
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 4.2e-66 256.9 188 70.7
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.8e-64 251.5 270 54.1
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 5.2e-64 250.0 347 42.7
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 8.5e-59 232.6 176 62.5
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.2e-55 222.2 262 50.0
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.9e-51 207.6 126 77.8
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.5e-50 204.5 119 80.7
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.6e-47 194.5 142 71.1
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 5.4e-45 186.8 382 33.2
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 1.0e-43 182.6 385 31.9
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-42 179.1 194 54.6
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.6e-41 175.3 230 47.0
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.6e-41 174.1 126 67.5
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.6e-41 174.1 119 75.6
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.8e-40 171.8 158 62.0
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.0e-40 170.6 130 70.8
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 9.5e-34 149.4 239 38.9
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 9.5e-34 149.4 239 38.9
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 1.6e-33 148.7 180 46.7
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 2.1e-33 148.3 161 51.6
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 2.9e-30 137.9 319 27.9
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-29 133.3 87 73.6
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 3.3e-26 124.4 275 37.5
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 2.2e-22 111.7 140 48.6
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 2.9e-22 111.3 90 63.3
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 2.9e-22 111.3 68 82.4
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 2.4e-21 108.2 64 75.0
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-20 105.9 92 57.6
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-20 105.9 92 57.6
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-20 105.9 92 57.6
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-20 105.9 92 57.6
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-20 105.5 84 63.1
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 4.6e-20 104.0 176 39.8
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-19 102.1 84 60.7
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.1e-18 99.4 82 63.4
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 5.6e-18 97.1 69 66.7
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.2e-15 89.4 54 79.6
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.6e-15 88.2 147 40.8
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 8.3e-14 83.2 83 56.6
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 9.2e-13 79.7 51 82.4
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 6.0e-12 77.0 59 59.3
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 6.0e-12 77.0 168 32.1
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 7.8e-12 76.6 81 50.6
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.7e-11 75.5 50 58.0
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.7e-11 75.5 50 58.0
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 5.1e-11 73.9 50 56.0
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 8.6e-11 73.2 53 71.7
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 2.8e-09 68.2 40 82.5
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 6.2e-09 67.0 52 65.4
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.4e-08 65.9 36 86.1
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 1.2e-07 62.8 36 75.0
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 2.2e-06 58.5 56 58.9
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 6.4e-06 57.0 105 38.1
Os03g0715332 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 6.4e-06 57.0 55 52.7


User provided reference genes

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